RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 SLC4A3P48751 1232 aa10.68□□□□□ -0.7
PROM1-204ENST00000503884 TKFCQ3LXA3 575 aa10.68□□□□□ -0.7
PROM1-204ENST00000503884 TMEM240Q5SV17 173 aa10.68□□□□□ -0.7
PROM1-204ENST00000503884 FAM160B2Q86V87 743 aa10.68□□□□□ -0.7
PROM1-204ENST00000503884 FAM126BQ8IXS8 530 aa10.68□□□□□ -0.7
PROM1-204ENST00000503884 CHURC1Q8WUH1 139 aa10.68□□□□□ -0.7
PROM1-204ENST00000503884 AGBL1Q96MI9 1066 aa10.68□□□□□ -0.7
PROM1-204ENST00000503884 NAPBQ9H115 298 aa10.68□□□□□ -0.7
PROM1-204ENST00000503884 INCENPQ9NQS7 918 aa10.68□□□□□ -0.7
PROM1-204ENST00000503884 RNF146Q9NTX7 359 aa10.68□□□□□ -0.7
PROM1-204ENST00000503884 ANAPC4Q9UJX5 808 aa10.68□□□□□ -0.7
PROM1-204ENST00000503884 CTDP1Q9Y5B0 961 aaPredicted RBP10.68□□□□□ -0.7
PROM1-204ENST00000503884 PRR29P0C7W0 189 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 MCCP23508 829 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 DNAJB2P25686 324 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 SLC1A4P43007 532 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 FXR2P51116 673 aaKnown RBP eCLIP10.67□□□□□ -0.7
PROM1-204ENST00000503884 IRX6P78412 446 aaPredicted RBP10.67□□□□□ -0.7
PROM1-204ENST00000503884 GRIN2CQ14957 1233 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 GNASQ5JWF2 1037 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 RCSD1Q6JBY9 416 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 TAPT1Q6NXT6 567 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 RASGRP2Q7LDG7 609 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 MORC4Q8TE76 937 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 FSD1Q9BTV5 496 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 SPC25Q9HBM1 224 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 HOMER2Q9NSB8 354 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 PRR12Q9ULL5 1215 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 REV3LO60673 3130 aa10.67□□□□□ -0.7
PROM1-204ENST00000503884 NCOR1O75376 2440 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 TRANK1O15050 2925 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 GRIN2DO15399 1336 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 ASB14A6NK59 587 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 ORC4O43929 436 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 NMT2O60551 498 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 SLC3A2P08195 630 aaKnown RBP10.66□□□□□ -0.7
PROM1-204ENST00000503884 FOSL2P15408 326 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 CSF2RAP15509 400 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 MX1P20591 662 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 CTDSPL2Q05D32 466 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 PPIGQ13427 754 aaKnown RBP eCLIP10.66□□□□□ -0.7
PROM1-204ENST00000503884 ALX1Q15699 326 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 MUM1L1Q5H9M0 696 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 PPP4R3BQ5MIZ7 849 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 VPS53Q5VIR6 699 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 BTNL9Q6UXG8 535 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 CCDC129Q6ZRS4 1044 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 KCTD1Q719H9 257 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 TRERF1Q96PN7 1200 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 CYP39A1Q9NYL5 469 aa10.66□□□□□ -0.7
PROM1-204ENST00000503884 DDX49Q9Y6V7 483 aaKnown RBP10.66□□□□□ -0.7
PROM1-204ENST00000503884 SCN10AQ9Y5Y9 1956 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 CABYRO75952 493 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 SMPD1P17405 629 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 PTGS1P23219 599 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 BEX3Q00994 111 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 TNFAIP2Q03169 654 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 TMEM63BQ5T3F8 832 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 POTEHQ6S545 545 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 SEZ6LQ9BYH1 1024 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 PBX4Q9BYU1 374 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 RANBP17Q9H2T7 1088 aaKnown RBP10.65□□□□□ -0.7
PROM1-204ENST00000503884 ZNF576Q9H609 170 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 PDGFCQ9NRA1 345 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 STX8Q9UNK0 236 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 Q9Y3F1 56 aa10.65□□□□□ -0.7
PROM1-204ENST00000503884 XIRP2A4UGR9 3374 aa10.65□□□□□ -0.71
PROM1-204ENST00000503884 TSPY2A6NKD2 308 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 GRXCR1A8MXD5 290 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 TLR3O15455 904 aaKnown RBP10.64□□□□□ -0.71
PROM1-204ENST00000503884 ICAM1P05362 532 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 ALAS1P13196 640 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 SNAP25P60880 206 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 FSCN1Q16658 493 aaKnown RBP10.64□□□□□ -0.71
PROM1-204ENST00000503884 IQSEC1Q6DN90 963 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 PSRC1Q6PGN9 363 aaPredicted RBP10.64□□□□□ -0.71
PROM1-204ENST00000503884 CXCL17Q6UXB2 119 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 ZNF365Q70YC5 407 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 TLK2Q86UE8 772 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 TICAM2Q86XR7 235 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 SMC5Q8IY18 1101 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 TMEM199Q8N511 208 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 USP38Q8NB14 1042 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 DCAF4Q8WV16 495 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 HERVK_113Q902F9 699 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 VWCEQ96DN2 955 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 PURBQ96QR8 312 aaKnown RBP10.64□□□□□ -0.71
PROM1-204ENST00000503884 PPP1R12CQ9BZL4 782 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 RWDD1Q9H446 243 aaPredicted RBP10.64□□□□□ -0.71
PROM1-204ENST00000503884 VTA1Q9NP79 307 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 IL23AQ9NPF7 189 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 HELLSQ9NRZ9 838 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 TCP11L1Q9NUJ3 509 aa10.64□□□□□ -0.71
PROM1-204ENST00000503884 ZMYM6O95789 1325 aa10.63□□□□□ -0.71
PROM1-204ENST00000503884 UMODL1Q5DID0 1318 aa10.63□□□□□ -0.71
PROM1-204ENST00000503884 LOC102724159A0A0B4J2E5 919 aa10.63□□□□□ -0.71
PROM1-204ENST00000503884 RBM47A0AV96 593 aaKnown RBP10.63□□□□□ -0.71
PROM1-204ENST00000503884 IGHDP01880 384 aa10.63□□□□□ -0.71
PROM1-204ENST00000503884 ACRP10323 421 aa10.63□□□□□ -0.71
PROM1-204ENST00000503884 CYP2C18P33260 490 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms