RNA–Protein interactions for RNA: ENST00000503534.5

CLPTM1L-204, Transcript of CLPTM1 like, humanhuman

TSL 2

Gene CLPTM1L, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-204ENST00000503534 IQSEC1Q6DN90 963 aa11.67□□□□□ -0.54
CLPTM1L-204ENST00000503534 PTCRAQ6ISU1 281 aaPredicted RBP11.67□□□□□ -0.54
CLPTM1L-204ENST00000503534 GDPD5Q8WTR4 605 aa11.67□□□□□ -0.54
CLPTM1L-204ENST00000503534 VWCEQ96DN2 955 aa11.67□□□□□ -0.54
CLPTM1L-204ENST00000503534 FGD4Q96M96 766 aa11.67□□□□□ -0.54
CLPTM1L-204ENST00000503534 NUP88Q99567 741 aaPredicted RBP11.67□□□□□ -0.54
CLPTM1L-204ENST00000503534 ACAD9Q9H845 621 aa11.67□□□□□ -0.54
CLPTM1L-204ENST00000503534 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
CLPTM1L-204ENST00000503534 GPHNQ9NQX3 736 aaPredicted RBP11.67□□□□□ -0.54
CLPTM1L-204ENST00000503534 FAM50BQ9Y247 325 aa11.67□□□□□ -0.54
CLPTM1L-204ENST00000503534 COG6Q9Y2V7 657 aa11.67□□□□□ -0.54
CLPTM1L-204ENST00000503534 TANC1Q9C0D5 1861 aa11.67□□□□□ -0.54
CLPTM1L-204ENST00000503534 USP17L12C9JPN9 530 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 USP17L21D6R901 530 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 F5H6K3 240 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 PITPNM1O00562 1244 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 BCAR3O75815 825 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 ARHGEF15O94989 841 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 FDX1P10109 184 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 IL9P15248 144 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 SMPD1P17405 629 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 RARSP54136 660 aaKnown RBP11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 CNTN2Q02246 1040 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 KLRC3Q07444 240 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 BFSP2Q13515 415 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 FAM47CQ5HY64 1035 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 MFSD14AQ96MC6 490 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 SLC38A10Q9HBR0 1119 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 HOMER2Q9NSB8 354 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 TRMT13Q9NUP7 481 aaKnown RBP11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 FEM1BQ9UK73 627 aa11.66□□□□□ -0.54
CLPTM1L-204ENST00000503534 CPT1AP50416 773 aa11.65□□□□□ -0.54
CLPTM1L-204ENST00000503534 BRDTQ58F21 947 aaPredicted RBP11.65□□□□□ -0.54
CLPTM1L-204ENST00000503534 AACSQ86V21 672 aa11.65□□□□□ -0.54
CLPTM1L-204ENST00000503534 CCDC155Q8N6L0 562 aa11.65□□□□□ -0.54
CLPTM1L-204ENST00000503534 FAM133AQ8N9E0 248 aa11.65□□□□□ -0.54
CLPTM1L-204ENST00000503534 TGS1Q96RS0 853 aaKnown RBP11.65□□□□□ -0.54
CLPTM1L-204ENST00000503534 CRBNQ96SW2 442 aa11.65□□□□□ -0.54
CLPTM1L-204ENST00000503534 NYAP2Q9P242 653 aa11.65□□□□□ -0.54
CLPTM1L-204ENST00000503534 MTUS1Q9ULD2 1270 aa11.65□□□□□ -0.54
CLPTM1L-204ENST00000503534 NOD1Q9Y239 953 aa11.65□□□□□ -0.54
CLPTM1L-204ENST00000503534 NOP58Q9Y2X3 529 aaKnown RBP11.65□□□□□ -0.54
CLPTM1L-204ENST00000503534 MYH4Q9Y623 1939 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 CYP2D7A0A087X1C5 515 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 GRXCR2A6NFK2 248 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 PRKAB2O43741 272 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 ST18O60284 1047 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 MBD4O95243 580 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 NDUFB10O96000 172 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 MYL3P08590 195 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 IQCF3P0C7M6 154 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 TRIM27P14373 513 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 LRRFIP1Q32MZ4 808 aaKnown RBP11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 KIAA1211Q6ZU35 1233 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 ERC1Q8IUD2 1116 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 TRMT2AQ8IZ69 625 aaKnown RBP11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 FRAT1Q92837 279 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 DNAJC2Q99543 621 aaKnown RBP11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 UPF3BQ9BZI7 483 aaKnown RBP11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 VTA1Q9NP79 307 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 CTNNA3Q9UI47 895 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 SIP14410 1827 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 PTPRSQ13332 1948 aa11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 GREB1LQ9C091 1923 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1L-204ENST00000503534 TCRBV5S4A2TA0A5A2 114 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 SOWAHBA6NEL2 793 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 GOLIM4O00461 696 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 ERVK-21P61565 698 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 WDR5P61964 334 aaKnown RBP11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 FOXK2Q01167 660 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 TKFCQ3LXA3 575 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 TAPT1Q6NXT6 567 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 POTEBQ6S5H4 581 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 EEPD1Q7L9B9 569 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 SPRED2Q7Z698 418 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 FBXO16Q8IX29 292 aaPredicted RBP11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 CLUAP1Q96AJ1 413 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 RAD9AQ99638 391 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 MTG1Q9BT17 334 aaPredicted RBP11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 SUGCTQ9HAC7 445 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 MKNK2Q9HBH9 465 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 A1CFQ9NQ94 594 aaKnown RBP11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 PDGFCQ9NRA1 345 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 RNF146Q9NTX7 359 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 ARPP21Q9UBL0 812 aaPredicted RBP11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 PRKAG3Q9UGI9 489 aa11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 ISY1Q9ULR0 285 aaKnown RBP11.63□□□□□ -0.55
CLPTM1L-204ENST00000503534 RAD50Q92878 1312 aa11.62□□□□□ -0.55
CLPTM1L-204ENST00000503534 LCHNA4D1U4 455 aa11.62□□□□□ -0.55
CLPTM1L-204ENST00000503534 PURAQ00577 322 aaKnown RBP11.62□□□□□ -0.55
CLPTM1L-204ENST00000503534 PTPN11Q06124 597 aaPredicted RBP11.62□□□□□ -0.55
CLPTM1L-204ENST00000503534 PTPROQ16827 1216 aa11.62□□□□□ -0.55
CLPTM1L-204ENST00000503534 NBPF20Q3BBV1 942 aa11.62□□□□□ -0.55
CLPTM1L-204ENST00000503534 DUSP28Q4G0W2 176 aa11.62□□□□□ -0.55
CLPTM1L-204ENST00000503534 NFRKBQ6P4R8 1299 aa11.62□□□□□ -0.55
CLPTM1L-204ENST00000503534 PRRX2Q99811 253 aa11.62□□□□□ -0.55
CLPTM1L-204ENST00000503534 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.62□□□□□ -0.554e-6■□□□□ 11.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms