RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 PCP11498 1178 aaKnown RBP19.13■□□□□ 0.65
SCLT1-204ENST00000503215 ACLYP53396 1101 aa19.13■□□□□ 0.65
SCLT1-204ENST00000503215 ZNF543Q08ER8 600 aa19.13■□□□□ 0.65
SCLT1-204ENST00000503215 LRIT3Q3SXY7 679 aa19.13■□□□□ 0.65
SCLT1-204ENST00000503215 TMEM63BQ5T3F8 832 aa19.13■□□□□ 0.65
SCLT1-204ENST00000503215 C1orf53Q5VUE5 145 aa19.13■□□□□ 0.65
SCLT1-204ENST00000503215 NSMFQ6X4W1 530 aa19.13■□□□□ 0.65
SCLT1-204ENST00000503215 BADQ92934 168 aa19.13■□□□□ 0.65
SCLT1-204ENST00000503215 TTC14Q96N46 770 aa19.13■□□□□ 0.65
SCLT1-204ENST00000503215 RNF41Q9H4P4 317 aaPredicted RBP19.13■□□□□ 0.65
SCLT1-204ENST00000503215 NFIBO00712 420 aa19.12■□□□□ 0.65
SCLT1-204ENST00000503215 SNHG28P0DPA3 235 aa19.12■□□□□ 0.65
SCLT1-204ENST00000503215 BAATQ14032 418 aaPredicted RBP19.12■□□□□ 0.65
SCLT1-204ENST00000503215 TTC22Q5TAA0 569 aa19.12■□□□□ 0.65
SCLT1-204ENST00000503215 Q7L0L9 218 aa19.12■□□□□ 0.65
SCLT1-204ENST00000503215 ESR2Q92731 530 aa19.12■□□□□ 0.65
SCLT1-204ENST00000503215 TSEN34Q9BSV6 310 aaKnown RBP19.12■□□□□ 0.65
SCLT1-204ENST00000503215 DSCC1Q9BVC3 393 aa19.12■□□□□ 0.65
SCLT1-204ENST00000503215 PDGFCQ9NRA1 345 aa19.12■□□□□ 0.65
SCLT1-204ENST00000503215 PRKAG2Q9UGJ0 569 aa19.12■□□□□ 0.65
SCLT1-204ENST00000503215 HIP1O00291 1037 aa19.11■□□□□ 0.65
SCLT1-204ENST00000503215 PQBP1O60828 265 aaKnown RBP19.11■□□□□ 0.65
SCLT1-204ENST00000503215 C6orf222P0C671 652 aaPredicted RBP19.11■□□□□ 0.65
SCLT1-204ENST00000503215 EEPD1Q7L9B9 569 aa19.11■□□□□ 0.65
SCLT1-204ENST00000503215 CLEC4DQ8WXI8 215 aa19.11■□□□□ 0.65
SCLT1-204ENST00000503215 UBA5Q9GZZ9 404 aa19.11■□□□□ 0.65
SCLT1-204ENST00000503215 UPF3AQ9H1J1 476 aaKnown RBP19.11■□□□□ 0.65
SCLT1-204ENST00000503215 ZSWIM5Q9P217 1185 aa19.11■□□□□ 0.65
SCLT1-204ENST00000503215 BEX3Q00994 111 aa19.1■□□□□ 0.65
SCLT1-204ENST00000503215 C9orf50Q5SZB4 431 aa19.1■□□□□ 0.65
SCLT1-204ENST00000503215 ASGR1P07306 291 aa19.09■□□□□ 0.65
SCLT1-204ENST00000503215 GJA9P57773 515 aa19.09■□□□□ 0.65
SCLT1-204ENST00000503215 TNFAIP2Q03169 654 aa19.09■□□□□ 0.65
SCLT1-204ENST00000503215 SHHQ15465 462 aa19.09■□□□□ 0.65
SCLT1-204ENST00000503215 GNASQ5JWF2 1037 aa19.09■□□□□ 0.65
SCLT1-204ENST00000503215 TAPT1Q6NXT6 567 aa19.09■□□□□ 0.65
SCLT1-204ENST00000503215 DGKHQ86XP1 1220 aa19.09■□□□□ 0.65
SCLT1-204ENST00000503215 FBXO16Q8IX29 292 aaPredicted RBP19.09■□□□□ 0.65
SCLT1-204ENST00000503215 STARD7Q9NQZ5 370 aa19.09■□□□□ 0.65
SCLT1-204ENST00000503215 LTBP2Q14767 1821 aa19.09■□□□□ 0.65
SCLT1-204ENST00000503215 LAMA2P24043 3122 aaKnown RBP19.09■□□□□ 0.65
SCLT1-204ENST00000503215 LCTP09848 1927 aa19.09■□□□□ 0.65
SCLT1-204ENST00000503215 ASB14A6NK59 587 aa19.08■□□□□ 0.65
SCLT1-204ENST00000503215 CLTBP09497 229 aa19.08■□□□□ 0.65
SCLT1-204ENST00000503215 SMPD1P17405 629 aa19.08■□□□□ 0.65
SCLT1-204ENST00000503215 CST5P28325 142 aaPredicted RBP19.08■□□□□ 0.65
SCLT1-204ENST00000503215 EPHB4P54760 987 aa19.08■□□□□ 0.65
SCLT1-204ENST00000503215 FAAP100Q0VG06 881 aa19.08■□□□□ 0.65
SCLT1-204ENST00000503215 SLC30A10Q6XR72 485 aa19.08■□□□□ 0.65
SCLT1-204ENST00000503215 NOL8Q76FK4 1167 aaKnown RBP19.08■□□□□ 0.65
SCLT1-204ENST00000503215 ENAHQ8N8S7 591 aaPredicted RBP19.08■□□□□ 0.65
SCLT1-204ENST00000503215 ANKS1AQ92625 1134 aa19.08■□□□□ 0.65
SCLT1-204ENST00000503215 ZSCAN10Q96SZ4 725 aaPredicted RBP19.08■□□□□ 0.65
SCLT1-204ENST00000503215 GNEQ9Y223 722 aaKnown RBP19.08■□□□□ 0.65
SCLT1-204ENST00000503215 MOXD2PA6NHM9 499 aa19.07■□□□□ 0.64
SCLT1-204ENST00000503215 PTH1RQ03431 593 aa19.07■□□□□ 0.64
SCLT1-204ENST00000503215 IMMTQ16891 758 aaKnown RBP19.07■□□□□ 0.64
SCLT1-204ENST00000503215 DEFB123Q8N688 67 aa19.07■□□□□ 0.64
SCLT1-204ENST00000503215 PNMA1Q8ND90 353 aa19.07■□□□□ 0.64
SCLT1-204ENST00000503215 TAF6LQ9Y6J9 622 aa19.07■□□□□ 0.64
SCLT1-204ENST00000503215 LAMA4Q16363 1823 aa19.07■□□□□ 0.64
SCLT1-204ENST00000503215 PTPDC1A2A3K4 754 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 KIAA0355O15063 1070 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 CHMLP26374 656 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 CALML3P27482 149 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 CYB5R4Q7L1T6 521 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 ANKRD33Q7Z3H0 272 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 IQCA1Q86XH1 822 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 MORC4Q8TE76 937 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 NUP133Q8WUM0 1156 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 VTI1AQ96AJ9 217 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 CTNNA3Q9UI47 895 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 DYNC1LI2O43237 492 aaPredicted RBP19.06■□□□□ 0.64
SCLT1-204ENST00000503215 CDK7P50613 346 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 ALDH5A1P51649 535 aaPredicted RBP19.06■□□□□ 0.64
SCLT1-204ENST00000503215 NKX3-2P78367 333 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 USH1GQ495M9 461 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 PCSK9Q8NBP7 692 aaKnown RBP19.06■□□□□ 0.64
SCLT1-204ENST00000503215 TBC1D5Q92609 795 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 GLT1D1Q96MS3 346 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 KAT14Q9H8E8 782 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 SPC25Q9HBM1 224 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 TMEM39AQ9NV64 488 aa19.06■□□□□ 0.64
SCLT1-204ENST00000503215 TNKSO95271 1327 aa19.05■□□□□ 0.64
SCLT1-204ENST00000503215 RPS6P62753 249 aaKnown RBP19.05■□□□□ 0.64
SCLT1-204ENST00000503215 GPATCH4Q5T3I0 446 aaKnown RBP19.05■□□□□ 0.64
SCLT1-204ENST00000503215 CXCL17Q6UXB2 119 aa19.05■□□□□ 0.64
SCLT1-204ENST00000503215 RNF207Q6ZRF8 634 aa19.05■□□□□ 0.64
SCLT1-204ENST00000503215 TLK2Q86UE8 772 aa19.05■□□□□ 0.64
SCLT1-204ENST00000503215 TOX2Q96NM4 488 aa19.05■□□□□ 0.64
SCLT1-204ENST00000503215 COL6A3P12111 3177 aa19.04■□□□□ 0.64
SCLT1-204ENST00000503215 ELP1O95163 1332 aa19.04■□□□□ 0.64
SCLT1-204ENST00000503215 FSCN1Q16658 493 aaKnown RBP19.04■□□□□ 0.64
SCLT1-204ENST00000503215 IQSEC1Q6DN90 963 aa19.04■□□□□ 0.64
SCLT1-204ENST00000503215 GPR153Q6NV75 609 aa19.04■□□□□ 0.64
SCLT1-204ENST00000503215 KIAA1211Q6ZU35 1233 aa19.04■□□□□ 0.64
SCLT1-204ENST00000503215 ADGRF4Q8IZF3 695 aa19.04■□□□□ 0.64
SCLT1-204ENST00000503215 KRT23Q9C075 422 aa19.04■□□□□ 0.64
SCLT1-204ENST00000503215 MTMR10Q9NXD2 777 aa19.04■□□□□ 0.64
SCLT1-204ENST00000503215 LRRC37A2A6NM11 1700 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms