RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 CLCN6P51797 869 aa18.61■□□□□ 0.57
VCAN-204ENST00000502527 AMPD3Q01432 767 aa18.61■□□□□ 0.57
VCAN-204ENST00000502527 DMTNQ08495 405 aa18.61■□□□□ 0.57
VCAN-204ENST00000502527 BMS1Q14692 1282 aaKnown RBP18.61■□□□□ 0.57
VCAN-204ENST00000502527 UTP14CQ5TAP6 766 aaKnown RBP18.61■□□□□ 0.57
VCAN-204ENST00000502527 TBCKQ8TEA7 893 aa18.61■□□□□ 0.57
VCAN-204ENST00000502527 MTMR4Q9NYA4 1195 aa18.61■□□□□ 0.57
VCAN-204ENST00000502527 CDK5RAP2Q96SN8 1893 aa18.6■□□□□ 0.57
VCAN-204ENST00000502527 A0A1W2PQC6 194 aa18.6■□□□□ 0.57
VCAN-204ENST00000502527 PDHBP11177 359 aa18.6■□□□□ 0.57
VCAN-204ENST00000502527 PPP1R2P41236 205 aa18.6■□□□□ 0.57
VCAN-204ENST00000502527 GTF2IP78347 998 aa18.6■□□□□ 0.57
VCAN-204ENST00000502527 ASPRV1Q53RT3 343 aa18.6■□□□□ 0.57
VCAN-204ENST00000502527 SP8Q8IXZ3 490 aa18.6■□□□□ 0.57
VCAN-204ENST00000502527 MB21D1Q8N884 522 aa18.6■□□□□ 0.57
VCAN-204ENST00000502527 C7orf25Q9BPX7 421 aa18.6■□□□□ 0.57
VCAN-204ENST00000502527 KRT9P35527 623 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 PMS1P54277 932 aaKnown RBP18.59■□□□□ 0.57
VCAN-204ENST00000502527 DDR1Q08345 913 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 LRRC15Q8TF66 581 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 TRIM9Q9C026 710 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 COA1Q9GZY4 146 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 UBA5Q9GZZ9 404 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 EXOC1Q9NV70 894 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 BIN2Q9UBW5 565 aaPredicted RBP18.59■□□□□ 0.57
VCAN-204ENST00000502527 BICDL2A1A5D9 508 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 POLRMTO00411 1230 aaKnown RBP18.59■□□□□ 0.57
VCAN-204ENST00000502527 PPEF1O14829 653 aaPredicted RBP18.59■□□□□ 0.57
VCAN-204ENST00000502527 TECP42680 631 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 ERVK-24P63145 666 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 TUBB2AQ13885 445 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 JAKMIP3Q5VZ66 844 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 TTI2Q6NXR4 508 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 GPR161Q8N6U8 529 aaKnown RBP18.59■□□□□ 0.57
VCAN-204ENST00000502527 CALML4Q96GE6 196 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 TUBB2BQ9BVA1 445 aa18.59■□□□□ 0.57
VCAN-204ENST00000502527 IRX2Q9BZI1 471 aaPredicted RBP18.59■□□□□ 0.57
VCAN-204ENST00000502527 RNF225M0QZC1 329 aaPredicted RBP18.58■□□□□ 0.57
VCAN-204ENST00000502527 GABPAQ06546 454 aa18.58■□□□□ 0.57
VCAN-204ENST00000502527 PICALMQ13492 652 aa18.58■□□□□ 0.57
VCAN-204ENST00000502527 TMCO3Q6UWJ1 677 aa18.58■□□□□ 0.57
VCAN-204ENST00000502527 UBR3Q6ZT12 1888 aa18.58■□□□□ 0.57
VCAN-204ENST00000502527 ADCY7P51828 1080 aa18.58■□□□□ 0.56
VCAN-204ENST00000502527 ASIC1P78348 528 aa18.58■□□□□ 0.56
VCAN-204ENST00000502527 GABPB1Q06547 395 aaPredicted RBP18.58■□□□□ 0.56
VCAN-204ENST00000502527 PDE4DQ08499 809 aa18.58■□□□□ 0.56
VCAN-204ENST00000502527 ZNF569Q5MCW4 686 aa18.58■□□□□ 0.56
VCAN-204ENST00000502527 RSRC2Q7L4I2 434 aaKnown RBP18.58■□□□□ 0.56
VCAN-204ENST00000502527 ZNF507Q8TCN5 953 aa18.58■□□□□ 0.56
VCAN-204ENST00000502527 AFF2P51816 1311 aa18.57■□□□□ 0.56
VCAN-204ENST00000502527 FRMPD2Q68DX3 1309 aaPredicted RBP18.57■□□□□ 0.56
VCAN-204ENST00000502527 SNHG28P0DPA3 235 aa18.57■□□□□ 0.56
VCAN-204ENST00000502527 CCNE1P24864 410 aa18.57■□□□□ 0.56
VCAN-204ENST00000502527 DNM2P50570 870 aa18.57■□□□□ 0.56
VCAN-204ENST00000502527 FAM114A1Q8IWE2 563 aa18.57■□□□□ 0.56
VCAN-204ENST00000502527 CSGALNACT2Q8N6G5 542 aa18.57■□□□□ 0.56
VCAN-204ENST00000502527 ACRBPQ8NEB7 543 aa18.57■□□□□ 0.56
VCAN-204ENST00000502527 OR8K1Q8NGG5 319 aa18.57■□□□□ 0.56
VCAN-204ENST00000502527 RABGGTAQ92696 567 aa18.57■□□□□ 0.56
VCAN-204ENST00000502527 GOLGA1Q92805 767 aa18.57■□□□□ 0.56
VCAN-204ENST00000502527 P2RX5Q93086 422 aa18.57■□□□□ 0.56
VCAN-204ENST00000502527 MYO1AQ9UBC5 1043 aa18.57■□□□□ 0.56
VCAN-204ENST00000502527 LUC7L2Q9Y383 392 aaKnown RBP18.57■□□□□ 0.56
VCAN-204ENST00000502527 IGKV6D-41A0A0C4DH26 115 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 PES1O00541 588 aaKnown RBP18.56■□□□□ 0.56
VCAN-204ENST00000502527 RIMBP2O15034 1052 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 AKR1B1P15121 316 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 TSR1Q2NL82 804 aaKnown RBP18.56■□□□□ 0.56
VCAN-204ENST00000502527 POTEDQ86YR6 584 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 MTMR9Q96QG7 549 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 DUSP9Q99956 384 aaKnown RBP18.56■□□□□ 0.56
VCAN-204ENST00000502527 MMTAG2Q9BU76 263 aaKnown RBP18.56■□□□□ 0.56
VCAN-204ENST00000502527 TMEM260Q9NX78 707 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 SWAP70Q9UH65 585 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 TRPC5Q9UL62 973 aaPredicted RBP18.56■□□□□ 0.56
VCAN-204ENST00000502527 ATP6V0A2Q9Y487 856 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 MYH1P12882 1939 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 A0A0U1RQJ8 604 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 TTC26A0AVF1 554 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 CTAGE9A4FU28 777 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 TTLL1O95922 423 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 TXKP42681 527 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 CALCRLQ16602 461 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 TEX35Q5T0J7 233 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 CNNM4Q6P4Q7 775 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 DPP8Q6V1X1 898 aaPredicted RBP18.56■□□□□ 0.56
VCAN-204ENST00000502527 LRRC47Q8N1G4 583 aaKnown RBP18.56■□□□□ 0.56
VCAN-204ENST00000502527 ATRIPQ8WXE1 791 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 CAPN11Q9UMQ6 739 aa18.56■□□□□ 0.56
VCAN-204ENST00000502527 MYO3BQ8WXR4 1341 aa18.55■□□□□ 0.56
VCAN-204ENST00000502527 FXR2P51116 673 aaKnown RBP eCLIP18.55■□□□□ 0.564e-8■■■■■ 35.7
VCAN-204ENST00000502527 TMEM266Q2M3C6 531 aa18.55■□□□□ 0.56
VCAN-204ENST00000502527 COBLL1Q53SF7 1204 aa18.55■□□□□ 0.56
VCAN-204ENST00000502527 PPP1R18Q6NYC8 613 aa18.55■□□□□ 0.56
VCAN-204ENST00000502527 DNAJC7Q99615 494 aa18.55■□□□□ 0.56
VCAN-204ENST00000502527 TUBGCP2Q9BSJ2 902 aa18.55■□□□□ 0.56
VCAN-204ENST00000502527 RAB34Q9BZG1 259 aa18.55■□□□□ 0.56
VCAN-204ENST00000502527 ZC3H12CQ9C0D7 883 aaKnown RBP18.55■□□□□ 0.56
VCAN-204ENST00000502527 STK17AQ9UEE5 414 aa18.55■□□□□ 0.56
VCAN-204ENST00000502527 LRWD1Q9UFC0 647 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms