RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 PNMA3Q9UL41 463 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 RABGAP1Q9Y3P9 1069 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 PCDHA1Q9Y5I3 950 aa12.48□□□□□ -0.41
GPATCH4-210ENST00000498756 TLR2O60603 784 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 ALAS1P13196 640 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 CTGFP29279 349 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 ERVK-9P63128 1117 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 ERVK-24P63145 666 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 AKAP17AQ02040 695 aaKnown RBP12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 PKP1Q13835 747 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 SNRNP48Q6IEG0 339 aaKnown RBP12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 TRIM22Q8IYM9 498 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 OXER1Q8TDS5 423 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 SMCR8Q8TEV9 937 aaPredicted RBP12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 AMNQ9BXJ7 453 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 EFCC1Q9HA90 598 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 HOMER2Q9NSB8 354 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 BARHL2Q9NY43 387 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 MORF4L1Q9UBU8 362 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 CCPG1Q9ULG6 757 aa12.47□□□□□ -0.41
GPATCH4-210ENST00000498756 COL11A1P12107 1806 aaPredicted RBP12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 NFIBO00712 420 aa12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 FDX1P10109 184 aa12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 DDIT3P35638 169 aa12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 GCLCP48506 637 aaPredicted RBP12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 HMGN5P82970 282 aaKnown RBP12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 KRT40Q6A162 431 aa12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 RIOX2Q8IUF8 465 aa12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 MB21D1Q8N884 522 aa12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 GPRC5AQ8NFJ5 357 aa12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 IPO9Q96P70 1041 aaKnown RBP12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 TRERF1Q96PN7 1200 aa12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 PURBQ96QR8 312 aaKnown RBP12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 ZFYVE28Q9HCC9 887 aa12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 SEC63Q9UGP8 760 aaKnown RBP12.46□□□□□ -0.41
GPATCH4-210ENST00000498756 A0A0G2JMZ2 1700 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 SMCO2A6NFE2 343 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 ERCC3P19447 782 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 SYT1P21579 422 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 OAZ1P54368 228 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 NAPAP54920 295 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 PKN2Q16513 984 aaKnown RBP12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 LARP1BQ659C4 914 aaKnown RBP12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 USP17L6PQ6QN14 398 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 FAM184AQ8NB25 1140 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 PHF20Q9BVI0 1012 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 TEX13BQ9BXU2 312 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 ARHGAP39Q9C0H5 1083 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 RNF146Q9NTX7 359 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 TMEM260Q9NX78 707 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 ZDHHC9Q9Y397 364 aa12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 CTDP1Q9Y5B0 961 aaPredicted RBP12.45□□□□□ -0.42
GPATCH4-210ENST00000498756 KIF28PB7ZC32 967 aa12.44□□□□□ -0.42
GPATCH4-210ENST00000498756 MEIS2O14770 477 aa12.44□□□□□ -0.42
GPATCH4-210ENST00000498756 HSP90AA1P07900 732 aaKnown RBP12.44□□□□□ -0.42
GPATCH4-210ENST00000498756 HOXA13P31271 388 aaPredicted RBP12.44□□□□□ -0.42
GPATCH4-210ENST00000498756 SP3Q02447 781 aa12.44□□□□□ -0.42
GPATCH4-210ENST00000498756 UBE2SQ16763 222 aa12.44□□□□□ -0.42
GPATCH4-210ENST00000498756 FAM110CQ1W6H9 321 aa12.44□□□□□ -0.42
GPATCH4-210ENST00000498756 EARS2Q5JPH6 523 aaKnown RBP12.44□□□□□ -0.42
GPATCH4-210ENST00000498756 NCAPG2Q86XI2 1143 aa12.44□□□□□ -0.42
GPATCH4-210ENST00000498756 FBXO18Q8NFZ0 1043 aa12.44□□□□□ -0.42
GPATCH4-210ENST00000498756 RASGRP4Q8TDF6 673 aa12.44□□□□□ -0.42
GPATCH4-210ENST00000498756 C8orf76Q96K31 380 aa12.44□□□□□ -0.42
GPATCH4-210ENST00000498756 COL20A1Q9P218 1284 aa12.44□□□□□ -0.42
GPATCH4-210ENST00000498756 ABCB11O95342 1321 aa12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 FAM205CA6NFA0 338 aa12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 BTBD18B2RXH4 712 aa12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 M0R2N6 131 aa12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 EDIL3O43854 480 aa12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 NLRP5P59047 1200 aa12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 NR5A1Q13285 461 aa12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 BAATQ14032 418 aaPredicted RBP12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 FOXD4L5Q5VV16 416 aaPredicted RBP12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 SLC30A10Q6XR72 485 aa12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 CD99L2Q8TCZ2 262 aa12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 GTF3C2Q8WUA4 911 aaPredicted RBP12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 FOXD4L4Q8WXT5 416 aaPredicted RBP12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 PGBD1Q96JS3 809 aa12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 SH3GLB2Q9NR46 395 aa12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 RBM27Q9P2N5 1060 aaKnown RBP12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 BIN2Q9UBW5 565 aaPredicted RBP12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 MTMR6Q9Y217 621 aa12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 MRPL11Q9Y3B7 192 aaKnown RBP12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 DDX49Q9Y6V7 483 aaKnown RBP12.43□□□□□ -0.42
GPATCH4-210ENST00000498756 CFBP00751 764 aa12.42□□□□□ -0.42
GPATCH4-210ENST00000498756 MMP1P03956 469 aa12.42□□□□□ -0.42
GPATCH4-210ENST00000498756 CLK2P49760 499 aaKnown RBP12.42□□□□□ -0.42
GPATCH4-210ENST00000498756 CNTN2Q02246 1040 aa12.42□□□□□ -0.42
GPATCH4-210ENST00000498756 TKFCQ3LXA3 575 aa12.42□□□□□ -0.42
GPATCH4-210ENST00000498756 NSMFQ6X4W1 530 aa12.42□□□□□ -0.42
GPATCH4-210ENST00000498756 CHST13Q8NET6 341 aa12.42□□□□□ -0.42
GPATCH4-210ENST00000498756 WASF1Q92558 559 aa12.42□□□□□ -0.42
GPATCH4-210ENST00000498756 TNFRSF25Q93038 417 aa12.42□□□□□ -0.42
GPATCH4-210ENST00000498756 ERO1AQ96HE7 468 aa12.42□□□□□ -0.42
GPATCH4-210ENST00000498756 TAAR1Q96RJ0 339 aa12.42□□□□□ -0.42
GPATCH4-210ENST00000498756 PSTPIP2Q9H939 334 aa12.42□□□□□ -0.42
GPATCH4-210ENST00000498756 RIC8AQ9NPQ8 531 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms