RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, human

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNC-208	ENST00000498724	CYLC1	P35663	651 aa	Predicted RBP	4.99	□□□□□ -1.61
TNC-208	ENST00000498724	PSEN2	P49810	448 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	SIK1	P57059	783 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	KRT83	P78385	493 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	MAP3K12	Q12852	859 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	PAK1	Q13153	545 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	KCNJ12	Q14500	433 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	TTC38	Q5R3I4	469 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	CCDC122	Q5T0U0	273 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	TRAPPC3L	Q5T215	181 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	LDHAL6A	Q6ZMR3	332 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	NUDT18	Q6ZVK8	323 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	USP49	Q70CQ1	688 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	SLF2	Q8IX21	1173 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	SMYD4	Q8IYR2	804 aa	Predicted RBP	4.99	□□□□□ -1.61
TNC-208	ENST00000498724	ZNF654	Q8IZM8	581 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	TTC13	Q8NBP0	860 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	LINC00116	Q8NCU8	138 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	FAM76A	Q8TAV0	307 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	PXYLP1	Q8TE99	480 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	STAG1	Q8WVM7	1258 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	NELFB	Q8WX92	580 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	SYMPK	Q92797	1274 aa	Known RBP	4.99	□□□□□ -1.61
TNC-208	ENST00000498724	JAKMIP2	Q96AA8	810 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	ZBTB9	Q96C00	473 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	UBAC1	Q9BSL1	405 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	MTA3	Q9BTC8	594 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	PRR14	Q9BWN1	585 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	RNF26	Q9BY78	433 aa	Predicted RBP	4.99	□□□□□ -1.61
TNC-208	ENST00000498724	VPS16	Q9H269	839 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	DEF6	Q9H4E7	631 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	YY1AP1	Q9H869	796 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	ARMT1	Q9H993	441 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.99	□□□□□ -1.61
TNC-208	ENST00000498724	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.99	□□□□□ -1.61
TNC-208	ENST00000498724	TMOD3	Q9NYL9	352 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	ZSWIM5	Q9P217	1185 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.99	□□□□□ -1.61
TNC-208	ENST00000498724	GUCA1B	Q9UMX6	200 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	4.99	□□□□□ -1.61
TNC-208	ENST00000498724	ZNF330	Q9Y3S2	320 aa	Predicted RBP	4.99	□□□□□ -1.61
TNC-208	ENST00000498724	JRKL	Q9Y4A0	524 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	SAR1B	Q9Y6B6	198 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.99	□□□□□ -1.61
TNC-208	ENST00000498724	LY75	O60449	1722 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	DOT1L	Q8TEK3	1739 aa		4.99	□□□□□ -1.61
TNC-208	ENST00000498724	CDHR2	Q9BYE9	1310 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	KCP	Q6ZWJ8	1503 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724		A0A087X0B3	334 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	TCRBV5S4A2T	A0A5A2	114 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	SHTN1	A0MZ66	631 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	GOLGA6C	A6NDK9	693 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	GOLGA6B	A6NDN3	693 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	LGALS16	A8MUM7	142 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	ERVV-2	B6SEH9	535 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	GOLGA8K	D6RF30	607 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724		H7C1D1	291 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	EBAG9	O00559	213 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	KRT86	O43790	486 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	OPA1	O60313	960 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	COBL	O75128	1261 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	PRPF6	O94906	941 aa	Known RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	SYF2	O95926	243 aa	Known RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	TFRC	P02786	760 aa	Known RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	ATP1A1	P05023	1023 aa	Known RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	PARP1	P09874	1014 aa	Known RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	GOLGA6D	P0CG33	693 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	SLC5A1	P13866	664 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	ITGA6	P23229	1130 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	GUCY2C	P25092	1073 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	ARID4A	P29374	1257 aa	Predicted RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	CASP1	P29466	404 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	CDC25A	P30304	524 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	PHKA1	P46020	1223 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	CTSW	P56202	376 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	HERVK_113	P62684	666 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	UBXN1	Q04323	297 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	PPFIA1	Q13136	1202 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	TRIM28	Q13263	835 aa	Known RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	ITPK1	Q13572	414 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	PPP2R5B	Q15173	497 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	PUM3	Q15397	648 aa	Known RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	ZNF174	Q15697	407 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	TCP11X2	Q5H9J9	407 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	PAPD7	Q5XG87	772 aa	Known RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	ADGRD1	Q6QNK2	874 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	GBP6	Q6ZN66	633 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	MMS22L	Q6ZRQ5	1243 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	ARHGAP27	Q6ZUM4	889 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	TADA2B	Q86TJ2	420 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	CMTR1	Q8N1G2	835 aa	Known RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	MICALL1	Q8N3F8	863 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	CCDC82	Q8N4S0	544 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	MAGEB6	Q8N7X4	407 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	MB21D1	Q8N884	522 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.98	□□□□□ -1.61
TNC-208	ENST00000498724	SPATA5	Q8NB90	893 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	FANCB	Q8NB91	859 aa		4.98	□□□□□ -1.61
TNC-208	ENST00000498724	OR8K1	Q8NGG5	319 aa		4.98	□□□□□ -1.61

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