RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 CDH23Q9H251 3354 aa26.61■■□□□ 1.85
CDKN2A-208ENST00000498124 GJA9P57773 515 aa26.61■■□□□ 1.85
CDKN2A-208ENST00000498124 CCDC96Q2M329 555 aa26.61■■□□□ 1.85
CDKN2A-208ENST00000498124 BTNL9Q6UXG8 535 aa26.61■■□□□ 1.85
CDKN2A-208ENST00000498124 TOMM22Q9NS69 142 aa26.61■■□□□ 1.85
CDKN2A-208ENST00000498124 UNC80Q8N2C7 3258 aa26.6■■□□□ 1.85
CDKN2A-208ENST00000498124 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.6■■□□□ 1.85
CDKN2A-208ENST00000498124 C6orf222P0C671 652 aaPredicted RBP26.6■■□□□ 1.85
CDKN2A-208ENST00000498124 TOP1P11387 765 aaKnown RBP26.6■■□□□ 1.85
CDKN2A-208ENST00000498124 EPHB4P54760 987 aa26.6■■□□□ 1.85
CDKN2A-208ENST00000498124 NKX3-2P78367 333 aa26.6■■□□□ 1.85
CDKN2A-208ENST00000498124 FAAP100Q0VG06 881 aa26.6■■□□□ 1.85
CDKN2A-208ENST00000498124 FAM109BQ6ICB4 259 aaPredicted RBP26.6■■□□□ 1.85
CDKN2A-208ENST00000498124 RILPL2Q969X0 211 aa26.6■■□□□ 1.85
CDKN2A-208ENST00000498124 TOX2Q96NM4 488 aa26.6■■□□□ 1.85
CDKN2A-208ENST00000498124 CYP39A1Q9NYL5 469 aa26.6■■□□□ 1.85
CDKN2A-208ENST00000498124 STXBP5LQ9Y2K9 1186 aa26.6■■□□□ 1.85
CDKN2A-208ENST00000498124 EYSQ5T1H1 3165 aa26.6■■□□□ 1.85
CDKN2A-208ENST00000498124 ICAM1P05362 532 aa26.59■■□□□ 1.85
CDKN2A-208ENST00000498124 SDSP20132 328 aa26.59■■□□□ 1.85
CDKN2A-208ENST00000498124 SLC16A2P36021 539 aa26.59■■□□□ 1.85
CDKN2A-208ENST00000498124 NUP133Q8WUM0 1156 aa26.59■■□□□ 1.85
CDKN2A-208ENST00000498124 CCPG1Q9ULG6 757 aa26.59■■□□□ 1.85
CDKN2A-208ENST00000498124 ASGR1P07306 291 aa26.58■■□□□ 1.85
CDKN2A-208ENST00000498124 AKNAD1Q5T1N1 836 aa26.58■■□□□ 1.85
CDKN2A-208ENST00000498124 GUCD1Q96NT3 240 aa26.58■■□□□ 1.85
CDKN2A-208ENST00000498124 PURBQ96QR8 312 aaKnown RBP26.58■■□□□ 1.85
CDKN2A-208ENST00000498124 NEDD4P46934 1319 aa26.58■■□□□ 1.85
CDKN2A-208ENST00000498124 FRMPD2Q68DX3 1309 aaPredicted RBP26.58■■□□□ 1.85
CDKN2A-208ENST00000498124 PDHBP11177 359 aa26.57■■□□□ 1.84
CDKN2A-208ENST00000498124 PTGS1P23219 599 aa26.57■■□□□ 1.84
CDKN2A-208ENST00000498124 CDK7P50613 346 aa26.57■■□□□ 1.84
CDKN2A-208ENST00000498124 SYDE2Q5VT97 1194 aa26.57■■□□□ 1.84
CDKN2A-208ENST00000498124 TBX21Q9UL17 535 aa26.57■■□□□ 1.84
CDKN2A-208ENST00000498124 GNEQ9Y223 722 aaKnown RBP26.57■■□□□ 1.84
CDKN2A-208ENST00000498124 ELP1O95163 1332 aa26.57■■□□□ 1.84
CDKN2A-208ENST00000498124 ASB14A6NK59 587 aa26.56■■□□□ 1.84
CDKN2A-208ENST00000498124 PCSK9Q8NBP7 692 aaKnown RBP26.56■■□□□ 1.84
CDKN2A-208ENST00000498124 GLT1D1Q96MS3 346 aa26.56■■□□□ 1.84
CDKN2A-208ENST00000498124 TMEM39AQ9NV64 488 aa26.56■■□□□ 1.84
CDKN2A-208ENST00000498124 SNHG28P0DPA3 235 aa26.55■■□□□ 1.84
CDKN2A-208ENST00000498124 PCP11498 1178 aaKnown RBP26.55■■□□□ 1.84
CDKN2A-208ENST00000498124 RAG1P15918 1043 aa26.55■■□□□ 1.84
CDKN2A-208ENST00000498124 TNFAIP2Q03169 654 aa26.55■■□□□ 1.84
CDKN2A-208ENST00000498124 GNASQ5JWF2 1037 aa26.55■■□□□ 1.84
CDKN2A-208ENST00000498124 SLC17A8Q8NDX2 589 aa26.55■■□□□ 1.84
CDKN2A-208ENST00000498124 MORC4Q8TE76 937 aa26.55■■□□□ 1.84
CDKN2A-208ENST00000498124 SPC25Q9HBM1 224 aa26.55■■□□□ 1.84
CDKN2A-208ENST00000498124 GPCPD1Q9NPB8 672 aa26.55■■□□□ 1.84
CDKN2A-208ENST00000498124 NFIBO00712 420 aa26.54■■□□□ 1.84
CDKN2A-208ENST00000498124 BEX3Q00994 111 aa26.54■■□□□ 1.84
CDKN2A-208ENST00000498124 TMEM63BQ5T3F8 832 aa26.54■■□□□ 1.84
CDKN2A-208ENST00000498124 TAPT1Q6NXT6 567 aa26.54■■□□□ 1.84
CDKN2A-208ENST00000498124 NSMFQ6X4W1 530 aa26.54■■□□□ 1.84
CDKN2A-208ENST00000498124 MFSD6Q6ZSS7 791 aa26.54■■□□□ 1.84
CDKN2A-208ENST00000498124 FBXO16Q8IX29 292 aaPredicted RBP26.54■■□□□ 1.84
CDKN2A-208ENST00000498124 PDGFCQ9NRA1 345 aa26.54■■□□□ 1.84
CDKN2A-208ENST00000498124 DCDC2CA8MYV0 355 aa26.53■■□□□ 1.84
CDKN2A-208ENST00000498124 SMPD1P17405 629 aa26.53■■□□□ 1.84
CDKN2A-208ENST00000498124 ZNF543Q08ER8 600 aa26.53■■□□□ 1.84
CDKN2A-208ENST00000498124 TTC22Q5TAA0 569 aa26.53■■□□□ 1.84
CDKN2A-208ENST00000498124 TTC14Q96N46 770 aa26.53■■□□□ 1.84
CDKN2A-208ENST00000498124 A0A0U1RQG5 324 aaPredicted RBP26.52■■□□□ 1.84
CDKN2A-208ENST00000498124 FPGSQ05932 587 aa26.52■■□□□ 1.84
CDKN2A-208ENST00000498124 BAATQ14032 418 aaPredicted RBP26.52■■□□□ 1.84
CDKN2A-208ENST00000498124 TLK2Q86UE8 772 aa26.52■■□□□ 1.84
CDKN2A-208ENST00000498124 CLEC4DQ8WXI8 215 aa26.52■■□□□ 1.84
CDKN2A-208ENST00000498124 FAM161BQ96MY7 647 aa26.52■■□□□ 1.84
CDKN2A-208ENST00000498124 MROH7Q68CQ1 1323 aa26.51■■□□□ 1.83
CDKN2A-208ENST00000498124 ARVCFO00192 962 aa26.51■■□□□ 1.83
CDKN2A-208ENST00000498124 MFAP1P55081 439 aaKnown RBP26.51■■□□□ 1.83
CDKN2A-208ENST00000498124 CWC27Q6UX04 472 aaKnown RBP26.51■■□□□ 1.83
CDKN2A-208ENST00000498124 EEPD1Q7L9B9 569 aa26.51■■□□□ 1.83
CDKN2A-208ENST00000498124 FAM126BQ8IXS8 530 aa26.51■■□□□ 1.83
CDKN2A-208ENST00000498124 RNF41Q9H4P4 317 aaPredicted RBP26.51■■□□□ 1.83
CDKN2A-208ENST00000498124 TIMP1P01033 207 aa26.5■■□□□ 1.83
CDKN2A-208ENST00000498124 SMAD3P84022 425 aaKnown RBP26.5■■□□□ 1.83
CDKN2A-208ENST00000498124 ZNF697Q5TEC3 545 aa26.5■■□□□ 1.83
CDKN2A-208ENST00000498124 SLC30A10Q6XR72 485 aa26.5■■□□□ 1.83
CDKN2A-208ENST00000498124 ZKSCAN3Q9BRR0 538 aa26.5■■□□□ 1.83
CDKN2A-208ENST00000498124 VTA1Q9NP79 307 aa26.5■■□□□ 1.83
CDKN2A-208ENST00000498124 ALDH5A1P51649 535 aaPredicted RBP26.49■■□□□ 1.83
CDKN2A-208ENST00000498124 FSCN1Q16658 493 aaKnown RBP26.49■■□□□ 1.83
CDKN2A-208ENST00000498124 CXCL17Q6UXB2 119 aa26.49■■□□□ 1.83
CDKN2A-208ENST00000498124 NOL8Q76FK4 1167 aaKnown RBP26.49■■□□□ 1.83
CDKN2A-208ENST00000498124 SLC43A3Q8NBI5 491 aa26.49■■□□□ 1.83
CDKN2A-208ENST00000498124 ESR2Q92731 530 aa26.49■■□□□ 1.83
CDKN2A-208ENST00000498124 RNPC3Q96LT9 517 aaKnown RBP26.49■■□□□ 1.83
CDKN2A-208ENST00000498124 IL25Q9H293 177 aa26.49■■□□□ 1.83
CDKN2A-208ENST00000498124 DIAPH3Q9NSV4 1193 aa26.49■■□□□ 1.83
CDKN2A-208ENST00000498124 CUL9Q8IWT3 2517 aa26.48■■□□□ 1.83
CDKN2A-208ENST00000498124 GRIN2DO15399 1336 aa26.48■■□□□ 1.83
CDKN2A-208ENST00000498124 WDR19Q8NEZ3 1342 aa26.48■■□□□ 1.83
CDKN2A-208ENST00000498124 ZNF213O14771 459 aa26.48■■□□□ 1.83
CDKN2A-208ENST00000498124 TTYH1Q9H313 450 aaPredicted RBP26.48■■□□□ 1.83
CDKN2A-208ENST00000498124 PRUNE2Q8WUY3 3088 aa26.48■■□□□ 1.83
CDKN2A-208ENST00000498124 CD4P01730 458 aa26.47■■□□□ 1.83
CDKN2A-208ENST00000498124 GSPT1P15170 499 aaKnown RBP26.47■■□□□ 1.83
CDKN2A-208ENST00000498124 IQSEC1Q6DN90 963 aa26.47■■□□□ 1.83
CDKN2A-208ENST00000498124 MFSD5Q6N075 450 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms