RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 A0A1W2PQ45 241 aaPredicted RBP4.47□□□□□ -1.69
RIF1-212ENST00000498041 A0A1W2PQY0 241 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 AGRPO00253 132 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 AURKAO14965 403 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 FGF10O15520 208 aaPredicted RBP4.47□□□□□ -1.69
RIF1-212ENST00000498041 NRDCO43847 1150 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 KCNH1O95259 989 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 IFNGR1P15260 489 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 RTP1P59025 263 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 HLA-DQA1Q5Y7H0 255 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 EEF1DP3Q658K8 133 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 RCSD1Q6JBY9 416 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 CYP2R1Q6VVX0 501 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 TRIM59Q8IWR1 403 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 TMEM52Q8NDY8 209 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 MRGPRX3Q96LB0 322 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 PTCHD1Q96NR3 888 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 MCMBPQ9BTE3 642 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 KCNK12Q9HB15 430 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 CWC22Q9HCG8 908 aaKnown RBP4.47□□□□□ -1.69
RIF1-212ENST00000498041 SIRPGQ9P1W8 387 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 GPR160Q9UJ42 338 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 GPR55Q9Y2T6 319 aaPredicted RBP4.47□□□□□ -1.69
RIF1-212ENST00000498041 BACE2Q9Y5Z0 518 aa4.47□□□□□ -1.69
RIF1-212ENST00000498041 C2orf71A6NGG8 1288 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 WTIPA6NIX2 430 aaPredicted RBP4.46□□□□□ -1.7
RIF1-212ENST00000498041 NOTOA8MTQ0 251 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 STXBP3O00186 592 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 NFIBO00712 420 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 PSPNO60542 156 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 TBC1D8O95759 1140 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 ITGAVP06756 1048 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 C1QTNF9P0C862 333 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 BUD31P41223 144 aaPredicted RBP4.46□□□□□ -1.7
RIF1-212ENST00000498041 SEPHS1P49903 392 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 SLC10A6Q3KNW5 377 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 TIGD5Q53EQ6 642 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 GTF2IRD2BQ6EKJ0 949 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 GALNT18Q6P9A2 607 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 SLCO6A1Q86UG4 719 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 GTF2IRD2Q86UP8 949 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 ZNF227Q86WZ6 799 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 ST13P5Q8NFI4 369 aaPredicted RBP4.46□□□□□ -1.7
RIF1-212ENST00000498041 DRC1Q96MC2 740 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 PPP1R16BQ96T49 567 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 RNF32Q9H0A6 362 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 CYP26B1Q9NR63 512 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 MSRB2Q9Y3D2 182 aa4.46□□□□□ -1.7
RIF1-212ENST00000498041 IQCA1LA6NCM1 817 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 NPIPB6E9PJ23 425 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 PRRG2O14669 202 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 CEBPAP49715 358 aaPredicted RBP4.45□□□□□ -1.7
RIF1-212ENST00000498041 HSF5Q4G112 596 aaPredicted RBP4.45□□□□□ -1.7
RIF1-212ENST00000498041 NLRX1Q86UT6 975 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 JAMLQ86YT9 394 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 SHISA4Q96DD7 197 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 SGSM3Q96HU1 749 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 CCDC140Q96MF4 163 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 LGR4Q9BXB1 951 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 KRTAP4-5Q9BYR2 181 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 CCDC113Q9H0I3 377 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 SLC6A17Q9H1V8 727 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 NKX2-4Q9H2Z4 354 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 NSUN3Q9H649 340 aaKnown RBP4.45□□□□□ -1.7
RIF1-212ENST00000498041 CRTAC1Q9NQ79 661 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 YBX2Q9Y2T7 364 aaKnown RBP4.45□□□□□ -1.7
RIF1-212ENST00000498041 TAF6LQ9Y6J9 622 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 NCANO14594 1321 aa4.45□□□□□ -1.7
RIF1-212ENST00000498041 TRBV23OR9-2A0A075B6M9 112 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.44□□□□□ -1.7
RIF1-212ENST00000498041 PDPK1O15530 556 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 TSPAN15O95858 294 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 PNLIPP16233 465 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 PAMP19021 973 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 HOXC12P31275 282 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 SCRN1Q12765 414 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 SERINC3Q13530 473 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 RASGRF1Q13972 1273 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 C1QL4Q86Z23 238 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 BTN2A2Q8WVV5 523 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 COPS5Q92905 334 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 ZNF669Q96BR6 464 aaPredicted RBP4.44□□□□□ -1.7
RIF1-212ENST00000498041 JMJD8Q96S16 334 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 PLCD4Q9BRC7 762 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 ACSL6Q9UKU0 697 aa4.44□□□□□ -1.7
RIF1-212ENST00000498041 NPHP3-ACAD11A0A0J9YXS1 232 aa4.43□□□□□ -1.7
RIF1-212ENST00000498041 A0A1W2PQ27 194 aa4.43□□□□□ -1.7
RIF1-212ENST00000498041 A0A1W2PQ64 194 aa4.43□□□□□ -1.7
RIF1-212ENST00000498041 A0A1W2PQC6 194 aa4.43□□□□□ -1.7
RIF1-212ENST00000498041 A0A1W2PQD8 194 aa4.43□□□□□ -1.7
RIF1-212ENST00000498041 A0A1W2PQU0 124 aa4.43□□□□□ -1.7
RIF1-212ENST00000498041 CCDC85CA6NKD9 419 aa4.43□□□□□ -1.7
RIF1-212ENST00000498041 TBX1O43435 398 aa4.43□□□□□ -1.7
RIF1-212ENST00000498041 EFEMP2O95967 443 aa4.43□□□□□ -1.7
RIF1-212ENST00000498041 CPP00450 1065 aa4.43□□□□□ -1.7
RIF1-212ENST00000498041 PRKCAP17252 672 aa4.43□□□□□ -1.7
RIF1-212ENST00000498041 L1CAMP32004 1257 aa4.43□□□□□ -1.7
RIF1-212ENST00000498041 ARL4AP40617 200 aa4.43□□□□□ -1.7
RIF1-212ENST00000498041 PPP2R2AP63151 447 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms