RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 CLIC4Q9Y696 253 aa18.33■□□□□ 0.52
PTK7-220ENST00000497957 ESYT2A0FGR8 921 aa18.32■□□□□ 0.52
PTK7-220ENST00000497957 hCG_1984214I3L0E3 225 aa18.32■□□□□ 0.52
PTK7-220ENST00000497957 EDIL3O43854 480 aa18.32■□□□□ 0.52
PTK7-220ENST00000497957 ZBED4O75132 1171 aa18.32■□□□□ 0.52
PTK7-220ENST00000497957 ICAM1P05362 532 aa18.32■□□□□ 0.52
PTK7-220ENST00000497957 HOXA7P31268 230 aaPredicted RBP18.32■□□□□ 0.52
PTK7-220ENST00000497957 NFKBIBQ15653 356 aa18.32■□□□□ 0.52
PTK7-220ENST00000497957 PPP1R18Q6NYC8 613 aa18.32■□□□□ 0.52
PTK7-220ENST00000497957 PIK3AP1Q6ZUJ8 805 aa18.32■□□□□ 0.52
PTK7-220ENST00000497957 FAM43AQ8N2R8 423 aa18.32■□□□□ 0.52
PTK7-220ENST00000497957 ZNF713Q8N859 430 aaPredicted RBP18.32■□□□□ 0.52
PTK7-220ENST00000497957 CLEC4DQ8WXI8 215 aa18.32■□□□□ 0.52
PTK7-220ENST00000497957 C6orf50Q9HD87 102 aa18.32■□□□□ 0.52
PTK7-220ENST00000497957 RIC8AQ9NPQ8 531 aa18.32■□□□□ 0.52
PTK7-220ENST00000497957 HOMER2Q9NSB8 354 aa18.32■□□□□ 0.52
PTK7-220ENST00000497957 ABT1Q9ULW3 272 aaKnown RBP18.32■□□□□ 0.52
PTK7-220ENST00000497957 TMEM88BA6NKF7 163 aa18.31■□□□□ 0.52
PTK7-220ENST00000497957 FAM155AB1AL88 458 aaPredicted RBP18.31■□□□□ 0.52
PTK7-220ENST00000497957 NFIBO00712 420 aa18.31■□□□□ 0.52
PTK7-220ENST00000497957 MEIS2O14770 477 aa18.31■□□□□ 0.52
PTK7-220ENST00000497957 FIBPO43427 364 aa18.31■□□□□ 0.52
PTK7-220ENST00000497957 SLC10A3P09131 477 aa18.31■□□□□ 0.52
PTK7-220ENST00000497957 CYP2C8P10632 490 aa18.31■□□□□ 0.52
PTK7-220ENST00000497957 ALAS1P13196 640 aa18.31■□□□□ 0.52
PTK7-220ENST00000497957 CALML3P27482 149 aa18.31■□□□□ 0.52
PTK7-220ENST00000497957 HOXA13P31271 388 aaPredicted RBP18.31■□□□□ 0.52
PTK7-220ENST00000497957 MCM4P33991 863 aa18.31■□□□□ 0.52
PTK7-220ENST00000497957 GTF2A2P52657 109 aa18.31■□□□□ 0.52
PTK7-220ENST00000497957 TPRNQ4KMQ1 711 aa18.31■□□□□ 0.52
PTK7-220ENST00000497957 FASTKD5Q7L8L6 764 aaKnown RBP18.31■□□□□ 0.52
PTK7-220ENST00000497957 BRAPQ7Z569 592 aa18.31■□□□□ 0.52
PTK7-220ENST00000497957 ZNF214Q9UL59 606 aaPredicted RBP18.31■□□□□ 0.52
PTK7-220ENST00000497957 CETPP11597 493 aa18.3■□□□□ 0.52
PTK7-220ENST00000497957 PDIA4P13667 645 aaKnown RBP18.3■□□□□ 0.52
PTK7-220ENST00000497957 CLK2P49760 499 aaKnown RBP18.3■□□□□ 0.52
PTK7-220ENST00000497957 HERVK_113P62684 666 aa18.3■□□□□ 0.52
PTK7-220ENST00000497957 IRX3P78415 501 aaPredicted RBP18.3■□□□□ 0.52
PTK7-220ENST00000497957 PAGR1Q9BTK6 254 aa18.3■□□□□ 0.52
PTK7-220ENST00000497957 PSTPIP2Q9H939 334 aa18.3■□□□□ 0.52
PTK7-220ENST00000497957 TXNRD2Q9NNW7 524 aa18.3■□□□□ 0.52
PTK7-220ENST00000497957 PCDHB6Q9Y5E3 794 aa18.3■□□□□ 0.52
PTK7-220ENST00000497957 MRVI1Q9Y6F6 885 aa18.3■□□□□ 0.52
PTK7-220ENST00000497957 ABCB11O95342 1321 aa18.29■□□□□ 0.52
PTK7-220ENST00000497957 PDHXO00330 501 aa18.29■□□□□ 0.52
PTK7-220ENST00000497957 GADD45BO75293 160 aaPredicted RBP18.29■□□□□ 0.52
PTK7-220ENST00000497957 ZBTB48P10074 688 aaPredicted RBP18.29■□□□□ 0.52
PTK7-220ENST00000497957 GRM1Q13255 1194 aa18.29■□□□□ 0.52
PTK7-220ENST00000497957 INF2Q27J81 1249 aa18.29■□□□□ 0.52
PTK7-220ENST00000497957 SNRNP48Q6IEG0 339 aaKnown RBP18.29■□□□□ 0.52
PTK7-220ENST00000497957 CYP4F22Q6NT55 531 aa18.29■□□□□ 0.52
PTK7-220ENST00000497957 LBX2Q6XYB7 198 aa18.29■□□□□ 0.52
PTK7-220ENST00000497957 CCDC12Q8WUD4 166 aaPredicted RBP18.29■□□□□ 0.52
PTK7-220ENST00000497957 PURBQ96QR8 312 aaKnown RBP18.29■□□□□ 0.52
PTK7-220ENST00000497957 BRMS1Q9HCU9 246 aa18.29■□□□□ 0.52
PTK7-220ENST00000497957 CTDP1Q9Y5B0 961 aaPredicted RBP18.29■□□□□ 0.52
PTK7-220ENST00000497957 MYPNQ86TC9 1320 aa18.28■□□□□ 0.52
PTK7-220ENST00000497957 IGF2BP3O00425 579 aaKnown RBP eCLIP18.28■□□□□ 0.52
PTK7-220ENST00000497957 FSTL1Q12841 308 aa18.28■□□□□ 0.52
PTK7-220ENST00000497957 PLS1Q14651 629 aa18.28■□□□□ 0.52
PTK7-220ENST00000497957 Q3C1V9 767 aa18.28■□□□□ 0.52
PTK7-220ENST00000497957 CUL5Q93034 780 aa18.28■□□□□ 0.52
PTK7-220ENST00000497957 GBP4Q96PP9 640 aa18.28■□□□□ 0.52
PTK7-220ENST00000497957 HOXC10Q9NYD6 342 aa18.28■□□□□ 0.52
PTK7-220ENST00000497957 COL20A1Q9P218 1284 aa18.28■□□□□ 0.52
PTK7-220ENST00000497957 RBPJLQ9UBG7 517 aa18.28■□□□□ 0.52
PTK7-220ENST00000497957 PRPF40AO75400 957 aaKnown RBP18.27■□□□□ 0.52
PTK7-220ENST00000497957 CFBP00751 764 aa18.27■□□□□ 0.52
PTK7-220ENST00000497957 OSBPP22059 807 aa18.27■□□□□ 0.52
PTK7-220ENST00000497957 GNA11P29992 359 aa18.27■□□□□ 0.52
PTK7-220ENST00000497957 HTRA3P83110 453 aa18.27■□□□□ 0.52
PTK7-220ENST00000497957 ZNF174Q15697 407 aa18.27■□□□□ 0.52
PTK7-220ENST00000497957 GALNT17Q6IS24 598 aa18.27■□□□□ 0.52
PTK7-220ENST00000497957 SLC30A10Q6XR72 485 aa18.27■□□□□ 0.52
PTK7-220ENST00000497957 ANKRD23Q86SG2 305 aa18.27■□□□□ 0.52
PTK7-220ENST00000497957 REXO1Q8N1G1 1221 aaKnown RBP18.27■□□□□ 0.52
PTK7-220ENST00000497957 LEO1Q8WVC0 666 aaPredicted RBP18.27■□□□□ 0.52
PTK7-220ENST00000497957 TRERF1Q96PN7 1200 aa18.27■□□□□ 0.52
PTK7-220ENST00000497957 RNF146Q9NTX7 359 aa18.27■□□□□ 0.52
PTK7-220ENST00000497957 LMBRD1Q9NUN5 540 aa18.27■□□□□ 0.52
PTK7-220ENST00000497957 MRPL11Q9Y3B7 192 aaKnown RBP18.27■□□□□ 0.52
PTK7-220ENST00000497957 CCDC194A0A1B0GVG4 234 aa18.26■□□□□ 0.51
PTK7-220ENST00000497957 TESPA1A2RU30 521 aaPredicted RBP18.26■□□□□ 0.51
PTK7-220ENST00000497957 STAT3P40763 770 aa18.26■□□□□ 0.51
PTK7-220ENST00000497957 KRT85P78386 507 aa18.26■□□□□ 0.51
PTK7-220ENST00000497957 PTPAQ15257 358 aa18.26■□□□□ 0.51
PTK7-220ENST00000497957 SF3A1Q15459 793 aaKnown RBP18.26■□□□□ 0.51
PTK7-220ENST00000497957 ANO1Q5XXA6 986 aa18.26■□□□□ 0.51
PTK7-220ENST00000497957 PAXIP1Q6ZW49 1069 aaPredicted RBP18.26■□□□□ 0.51
PTK7-220ENST00000497957 KRT25Q7Z3Z0 450 aa18.26■□□□□ 0.51
PTK7-220ENST00000497957 FCHSD1Q86WN1 690 aa18.26■□□□□ 0.51
PTK7-220ENST00000497957 FAM177A1Q8N128 213 aaPredicted RBP18.26■□□□□ 0.51
PTK7-220ENST00000497957 TBCKQ8TEA7 893 aa18.26■□□□□ 0.51
PTK7-220ENST00000497957 ZNF396Q96N95 335 aaPredicted RBP18.26■□□□□ 0.51
PTK7-220ENST00000497957 RTEL1Q9NZ71 1219 aa18.26■□□□□ 0.51
PTK7-220ENST00000497957 ATP6V1DQ9Y5K8 247 aa18.26■□□□□ 0.51
PTK7-220ENST00000497957 AOC2O75106 756 aa18.25■□□□□ 0.51
PTK7-220ENST00000497957 MRPL12P52815 198 aaKnown RBP18.25■□□□□ 0.51
PTK7-220ENST00000497957 UBXN2AP68543 259 aa18.25■□□□□ 0.51
PTK7-220ENST00000497957 NONOQ15233 471 aaKnown RBP eCLIP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms