RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 AKAP17AQ02040 695 aaKnown RBP23.19■■□□□ 1.3
CTSD-206ENST00000497544 SLC35G1Q2M3R5 365 aa23.19■■□□□ 1.3
CTSD-206ENST00000497544 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.19■■□□□ 1.3
CTSD-206ENST00000497544 CCAR1Q8IX12 1150 aaKnown RBP23.19■■□□□ 1.3
CTSD-206ENST00000497544 REPS2Q8NFH8 660 aa23.19■■□□□ 1.3
CTSD-206ENST00000497544 PIGSQ96S52 555 aa23.19■■□□□ 1.3
CTSD-206ENST00000497544 ARHGAP39Q9C0H5 1083 aa23.19■■□□□ 1.3
CTSD-206ENST00000497544 SPATC1LQ9H0A9 340 aa23.19■■□□□ 1.3
CTSD-206ENST00000497544 SEC63Q9UGP8 760 aaKnown RBP23.19■■□□□ 1.3
CTSD-206ENST00000497544 PNMA2Q9UL42 364 aa23.19■■□□□ 1.3
CTSD-206ENST00000497544 ALPK3Q96L96 1907 aa23.19■■□□□ 1.3
CTSD-206ENST00000497544 ATP2A1O14983 1001 aa23.18■■□□□ 1.3
CTSD-206ENST00000497544 ZBTB5O15062 677 aa23.18■■□□□ 1.3
CTSD-206ENST00000497544 QRICH1Q2TAL8 776 aa23.18■■□□□ 1.3
CTSD-206ENST00000497544 GTF3C6Q969F1 213 aa23.18■■□□□ 1.3
CTSD-206ENST00000497544 MTMR8Q96EF0 704 aa23.18■■□□□ 1.3
CTSD-206ENST00000497544 PRDM6Q9NQX0 595 aa23.18■■□□□ 1.3
CTSD-206ENST00000497544 MTMR10Q9NXD2 777 aa23.18■■□□□ 1.3
CTSD-206ENST00000497544 ZNF214Q9UL59 606 aaPredicted RBP23.18■■□□□ 1.3
CTSD-206ENST00000497544 V9GY48 417 aaPredicted RBP23.18■■□□□ 1.3
CTSD-206ENST00000497544 PNMA6FA0A0J9YX94 578 aa23.17■■□□□ 1.3
CTSD-206ENST00000497544 CDKL5O76039 1030 aa23.17■■□□□ 1.3
CTSD-206ENST00000497544 ICAM1P05362 532 aa23.17■■□□□ 1.3
CTSD-206ENST00000497544 IFNAR1P17181 557 aa23.17■■□□□ 1.3
CTSD-206ENST00000497544 SSRP1Q08945 709 aaKnown RBP23.17■■□□□ 1.3
CTSD-206ENST00000497544 NTRK3Q16288 839 aa23.17■■□□□ 1.3
CTSD-206ENST00000497544 FBXO11Q86XK2 927 aa23.17■■□□□ 1.3
CTSD-206ENST00000497544 RIOX2Q8IUF8 465 aa23.17■■□□□ 1.3
CTSD-206ENST00000497544 CCDC83Q8IWF9 413 aa23.17■■□□□ 1.3
CTSD-206ENST00000497544 TMX3Q96JJ7 454 aa23.17■■□□□ 1.3
CTSD-206ENST00000497544 AGBL1Q96MI9 1066 aa23.17■■□□□ 1.3
CTSD-206ENST00000497544 TEX13BQ9BXU2 312 aa23.17■■□□□ 1.3
CTSD-206ENST00000497544 CCPG1Q9ULG6 757 aa23.17■■□□□ 1.3
CTSD-206ENST00000497544 CNTNAP5Q8WYK1 1306 aa23.16■■□□□ 1.3
CTSD-206ENST00000497544 SLC25A27O95847 323 aa23.16■■□□□ 1.3
CTSD-206ENST00000497544 FUT2Q10981 343 aa23.16■■□□□ 1.3
CTSD-206ENST00000497544 TRAF1Q13077 416 aa23.16■■□□□ 1.3
CTSD-206ENST00000497544 SNRNP48Q6IEG0 339 aaKnown RBP23.16■■□□□ 1.3
CTSD-206ENST00000497544 TRIM22Q8IYM9 498 aa23.16■■□□□ 1.3
CTSD-206ENST00000497544 SNX21Q969T3 373 aa23.16■■□□□ 1.3
CTSD-206ENST00000497544 AMNQ9BXJ7 453 aa23.16■■□□□ 1.3
CTSD-206ENST00000497544 MOV10L1Q9BXT6 1211 aaKnown RBP23.16■■□□□ 1.3
CTSD-206ENST00000497544 CWC22Q9HCG8 908 aaKnown RBP23.16■■□□□ 1.3
CTSD-206ENST00000497544 ZNF536O15090 1300 aa23.15■■□□□ 1.3
CTSD-206ENST00000497544 SMCHD1A6NHR9 2005 aa23.15■■□□□ 1.3
CTSD-206ENST00000497544 hCG_1642624A0A1W2PR95 340 aa23.15■■□□□ 1.3
CTSD-206ENST00000497544 PRPF3O43395 683 aaKnown RBP23.15■■□□□ 1.3
CTSD-206ENST00000497544 ALAS1P13196 640 aa23.15■■□□□ 1.3
CTSD-206ENST00000497544 COPB2P35606 906 aa23.15■■□□□ 1.3
CTSD-206ENST00000497544 GJA8P48165 433 aa23.15■■□□□ 1.3
CTSD-206ENST00000497544 KIF22Q14807 665 aa23.15■■□□□ 1.3
CTSD-206ENST00000497544 WDR78Q5VTH9 848 aa23.15■■□□□ 1.3
CTSD-206ENST00000497544 NCAPG2Q86XI2 1143 aa23.15■■□□□ 1.3
CTSD-206ENST00000497544 PHKBQ93100 1093 aa23.15■■□□□ 1.3
CTSD-206ENST00000497544 SLC26A6Q9BXS9 759 aa23.15■■□□□ 1.3
CTSD-206ENST00000497544 RNF26Q9BY78 433 aaPredicted RBP23.15■■□□□ 1.3
CTSD-206ENST00000497544 PPFIA3O75145 1194 aa23.14■■□□□ 1.29
CTSD-206ENST00000497544 TKFCQ3LXA3 575 aa23.14■■□□□ 1.29
CTSD-206ENST00000497544 USH1GQ495M9 461 aa23.14■■□□□ 1.29
CTSD-206ENST00000497544 HSCBQ8IWL3 235 aa23.14■■□□□ 1.29
CTSD-206ENST00000497544 SHCBP1Q8NEM2 672 aa23.14■■□□□ 1.29
CTSD-206ENST00000497544 A0A0G2JMZ2 1700 aa23.13■■□□□ 1.29
CTSD-206ENST00000497544 ECM2O94769 699 aaPredicted RBP23.13■■□□□ 1.29
CTSD-206ENST00000497544 ERCC3P19447 782 aa23.13■■□□□ 1.29
CTSD-206ENST00000497544 MAPK4P31152 587 aa23.13■■□□□ 1.29
CTSD-206ENST00000497544 TRERF1Q96PN7 1200 aa23.13■■□□□ 1.29
CTSD-206ENST00000497544 PORCNQ9H237 461 aa23.13■■□□□ 1.29
CTSD-206ENST00000497544 RIPK3Q9Y572 518 aa23.13■■□□□ 1.29
CTSD-206ENST00000497544 K7ELQ4 463 aaPredicted RBP23.12■■□□□ 1.29
CTSD-206ENST00000497544 FMNL1O95466 1100 aaPredicted RBP23.12■■□□□ 1.29
CTSD-206ENST00000497544 CHST13Q8NET6 341 aa23.12■■□□□ 1.29
CTSD-206ENST00000497544 LLPHQ9BRT6 129 aaKnown RBP23.12■■□□□ 1.29
CTSD-206ENST00000497544 MROH8Q9H579 483 aa23.12■■□□□ 1.29
CTSD-206ENST00000497544 HOMER2Q9NSB8 354 aa23.12■■□□□ 1.29
CTSD-206ENST00000497544 FBXO40Q9UH90 709 aa23.12■■□□□ 1.29
CTSD-206ENST00000497544 PCDHA1Q9Y5I3 950 aa23.12■■□□□ 1.29
CTSD-206ENST00000497544 CTDNEP1O95476 244 aa23.11■■□□□ 1.29
CTSD-206ENST00000497544 GJB1P08034 283 aa23.11■■□□□ 1.29
CTSD-206ENST00000497544 LACTBP83111 547 aaPredicted RBP23.11■■□□□ 1.29
CTSD-206ENST00000497544 ST3GAL1Q11201 340 aa23.11■■□□□ 1.29
CTSD-206ENST00000497544 COA7Q96BR5 231 aa23.11■■□□□ 1.29
CTSD-206ENST00000497544 RNF146Q9NTX7 359 aa23.11■■□□□ 1.29
CTSD-206ENST00000497544 MRPL11Q9Y3B7 192 aaKnown RBP23.11■■□□□ 1.29
CTSD-206ENST00000497544 ABCB11O95342 1321 aa23.1■■□□□ 1.29
CTSD-206ENST00000497544 EVI5O60447 810 aa23.1■■□□□ 1.29
CTSD-206ENST00000497544 PPP1R11O60927 126 aaPredicted RBP23.1■■□□□ 1.29
CTSD-206ENST00000497544 FARP2O94887 1054 aaPredicted RBP23.1■■□□□ 1.29
CTSD-206ENST00000497544 PSMC4P43686 418 aa23.1■■□□□ 1.29
CTSD-206ENST00000497544 FCGRTP55899 365 aa23.1■■□□□ 1.29
CTSD-206ENST00000497544 HEATR3Q7Z4Q2 680 aa23.1■■□□□ 1.29
CTSD-206ENST00000497544 NSUN7Q8NE18 718 aaKnown RBP23.1■■□□□ 1.29
CTSD-206ENST00000497544 ORC3Q9UBD5 711 aaPredicted RBP23.1■■□□□ 1.29
CTSD-206ENST00000497544 IVNS1ABPQ9Y6Y0 642 aa23.1■■□□□ 1.29
CTSD-206ENST00000497544 DOCK3Q8IZD9 2030 aa23.09■■□□□ 1.29
CTSD-206ENST00000497544 EYSQ5T1H1 3165 aa23.09■■□□□ 1.29
CTSD-206ENST00000497544 TNPO2O14787 897 aaKnown RBP23.09■■□□□ 1.29
CTSD-206ENST00000497544 DEXIO95424 95 aa23.09■■□□□ 1.29
CTSD-206ENST00000497544 CCL5P13501 91 aa23.09■■□□□ 1.29
CTSD-206ENST00000497544 SCG2P13521 617 aa23.09■■□□□ 1.29
CTSD-206ENST00000497544 TAL1P17542 331 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms