RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 PRAMEF13Q5VWM6 474 aa7.18□□□□□ -1.26
SOX2-OT-216ENST00000497122 PPP4R4Q6NUP7 873 aa7.18□□□□□ -1.26
SOX2-OT-216ENST00000497122 MFSD2AQ8NA29 543 aa7.18□□□□□ -1.26
SOX2-OT-216ENST00000497122 RIN3Q8TB24 985 aa7.18□□□□□ -1.26
SOX2-OT-216ENST00000497122 MTMR8Q96EF0 704 aa7.18□□□□□ -1.26
SOX2-OT-216ENST00000497122 CLUHP3Q96NS8 147 aa7.18□□□□□ -1.26
SOX2-OT-216ENST00000497122 RPS6KC1Q96S38 1066 aa7.18□□□□□ -1.26
SOX2-OT-216ENST00000497122 DPH2Q9BQC3 489 aaPredicted RBP7.18□□□□□ -1.26
SOX2-OT-216ENST00000497122 LMCD1Q9NZU5 365 aa7.18□□□□□ -1.26
SOX2-OT-216ENST00000497122 MAPRE3Q9UPY8 281 aa7.18□□□□□ -1.26
SOX2-OT-216ENST00000497122 CNTNAP4Q9C0A0 1308 aa7.18□□□□□ -1.26
SOX2-OT-216ENST00000497122 GFRA2O00451 464 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 KIF3BO15066 747 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 SCGB1D2O95969 90 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 TP53P04637 393 aaPredicted RBP7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 PGRP06401 933 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 SDSP20132 328 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 GNALP38405 381 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 NFE2Q16621 373 aaPredicted RBP7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 MAP9Q49MG5 647 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 FNDC3BQ53EP0 1204 aaKnown RBP7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 TDRD10Q5VZ19 366 aaKnown RBP7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 LRRTM3Q86VH5 581 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 SMC5Q8IY18 1101 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 AFAP1L2Q8N4X5 818 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 UBE2FQ969M7 185 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 AARSD1Q9BTE6 412 aaKnown RBP7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 ZSWIM5Q9P217 1185 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 SNCAIPQ9Y6H5 919 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 PRR36Q9H6K5 1346 aa7.17□□□□□ -1.26
SOX2-OT-216ENST00000497122 A0A1W2PQU0 124 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 SHTN1A0MZ66 631 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 CHURC1-FNTBB4DL54 471 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 TNFRSF10CO14798 259 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 EIF3JO75822 258 aaKnown RBP7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 GLI1P08151 1106 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 NAT2P11245 290 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 CYP7A1P22680 504 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 ITKQ08881 620 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 OS9Q13438 667 aaPredicted RBP7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 LCE1DQ5T752 114 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 TMED8Q6PL24 325 aaPredicted RBP7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 DDX46Q7L014 1031 aaKnown RBP7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 STRA8Q7Z7C7 330 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 PHACTR4Q8IZ21 702 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 KISS1RQ969F8 398 aaPredicted RBP7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 CNNM2Q9H8M5 875 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 ARHGEF4Q9NR80 690 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 SEMA3GQ9NS98 782 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 SLAMF8Q9P0V8 285 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 CAPN6Q9Y6Q1 641 aa7.16□□□□□ -1.26
SOX2-OT-216ENST00000497122 ARID1BQ8NFD5 2236 aaPredicted RBP7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 CAND2O75155 1236 aa7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 KRT18P05783 430 aaKnown RBP7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 ZNF865P0CJ78 1059 aaPredicted RBP7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 RAP1GAPP47736 663 aa7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 NEK4P51957 841 aa7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 MESP2Q0VG99 397 aa7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 HSP90AA2PQ14568 343 aaPredicted RBP7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 INTS3Q68E01 1043 aaKnown RBP7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 CCSAPQ6IQ19 270 aaPredicted RBP7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 PRR23BQ6ZRT6 265 aa7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 CDH24Q86UP0 819 aa7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 FAM13CQ8NE31 585 aa7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 DIRC2Q96SL1 478 aa7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 NDOR1Q9UHB4 597 aa7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 SFMBT1Q9UHJ3 866 aa7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 ZNF214Q9UL59 606 aaPredicted RBP7.15□□□□□ -1.26
SOX2-OT-216ENST00000497122 RBAK-RBAKDNI3L0D1 243 aa7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 PRODHO43272 600 aa7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 CST3P01034 146 aaPredicted RBP7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 MCL1Q07820 350 aa7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 CDCP2Q5VXM1 449 aa7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 SYDE1Q6ZW31 735 aaPredicted RBP7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 C14orf80Q86SX3 495 aa7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 MYO1HQ8N1T3 1032 aa7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 RELTQ969Z4 430 aa7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 SLC6A18Q96N87 628 aa7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 MPHOSPH6Q99547 160 aaKnown RBP7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 APBA2Q99767 749 aa7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 LGR4Q9BXB1 951 aa7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 ASPSCR1Q9BZE9 553 aa7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 AASDHPPTQ9NRN7 309 aa7.14□□□□□ -1.27
SOX2-OT-216ENST00000497122 DNAJC25-GNG10A0A024R161 153 aa7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 CREB3O43889 395 aa7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 RAB27AP51159 221 aa7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 NEK2P51955 445 aa7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 PPP2R2AP63151 447 aa7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 SUMO1P63165 101 aaKnown RBP7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 BBS9Q3SYG4 887 aa7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 HEATR6Q6AI08 1181 aaKnown RBP7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 CHPFQ8IZ52 775 aa7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 PPM1KQ8N3J5 372 aa7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 WDR66Q8TBY9 1149 aa7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 FGD4Q96M96 766 aa7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 ALPK1Q96QP1 1244 aa7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 PPP1R16BQ96T49 567 aa7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 MRPL4Q9BYD3 311 aaKnown RBP7.13□□□□□ -1.27
SOX2-OT-216ENST00000497122 SLC5A4Q9NY91 659 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms