RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 JAKMIP1Q96N16 626 aaKnown RBP7.09□□□□□ -1.27
HMGCL-206ENST00000496907 DEFB118Q96PH6 123 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 BACH2Q9BYV9 841 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 C22orf23Q9BZE7 217 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 UBE2OQ9C0C9 1292 aaKnown RBP7.09□□□□□ -1.27
HMGCL-206ENST00000496907 NBPF3Q9H094 633 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 RPAP3Q9H6T3 665 aaPredicted RBP7.09□□□□□ -1.27
HMGCL-206ENST00000496907 RBM28Q9NW13 759 aaKnown RBP7.09□□□□□ -1.27
HMGCL-206ENST00000496907 SLC12A7Q9Y666 1083 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 MYH7P12883 1935 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 AK9Q5TCS8 1911 aa7.09□□□□□ -1.27
HMGCL-206ENST00000496907 NEDD4P46934 1319 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 STRNO43815 780 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 RAD21O60216 631 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 SLC25A27O95847 323 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 NDUFB10O96000 172 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 PARP1P09874 1014 aaKnown RBP7.08□□□□□ -1.28
HMGCL-206ENST00000496907 SLURP2P0DP57 97 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 ELNP15502 786 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 VCAM1P19320 739 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 RPS6KB1P23443 525 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 MCM2P49736 904 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 STAT2P52630 851 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 FCGRTP55899 365 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 MOGSQ13724 837 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 SEC23AQ15436 765 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 ZNF697Q5TEC3 545 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 CPLX2Q6PUV4 134 aaKnown RBP7.08□□□□□ -1.28
HMGCL-206ENST00000496907 BTNL9Q6UXG8 535 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 SAMD3Q8N6K7 520 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 ENAHQ8N8S7 591 aaPredicted RBP7.08□□□□□ -1.28
HMGCL-206ENST00000496907 USP38Q8NB14 1042 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 GPRC5AQ8NFJ5 357 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 CTCFLQ8NI51 663 aaPredicted RBP7.08□□□□□ -1.28
HMGCL-206ENST00000496907 KCTD12Q96CX2 325 aaKnown RBP7.08□□□□□ -1.28
HMGCL-206ENST00000496907 ZNF274Q96GC6 653 aaPredicted RBP7.08□□□□□ -1.28
HMGCL-206ENST00000496907 PAWRQ96IZ0 340 aaKnown RBP7.08□□□□□ -1.28
HMGCL-206ENST00000496907 SLF1Q9BQI6 1058 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 LRFN3Q9BTN0 628 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 C1QTNF1Q9BXJ1 281 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 TANGO6Q9C0B7 1094 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 ASCC2Q9H1I8 757 aaPredicted RBP7.08□□□□□ -1.28
HMGCL-206ENST00000496907 INCENPQ9NQS7 918 aa7.08□□□□□ -1.28
HMGCL-206ENST00000496907 FOCADQ5VW36 1801 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 SMIM22K7EJ46 135 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 SH2B2O14492 632 aaPredicted RBP7.07□□□□□ -1.28
HMGCL-206ENST00000496907 ATP2A1O14983 1001 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 ADCY3O60266 1144 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 FLOT1O75955 427 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 INHAP05111 366 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 SNHG28P0DPA3 235 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 CASTP20810 708 aaKnown RBP7.07□□□□□ -1.28
HMGCL-206ENST00000496907 MAPK4P31152 587 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 EVCP57679 992 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 HERVK_113P62684 666 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 IKQ13123 557 aaPredicted RBP7.07□□□□□ -1.28
HMGCL-206ENST00000496907 RABEP1Q15276 862 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 ZYXQ15942 572 aaKnown RBP7.07□□□□□ -1.28
HMGCL-206ENST00000496907 FAM110CQ1W6H9 321 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 CCDC96Q2M329 555 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 TKFCQ3LXA3 575 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 STOX1Q6ZVD7 989 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 CYB5R4Q7L1T6 521 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 NECAB2Q7Z6G3 386 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 FANCBQ8NB91 859 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 SHCBP1Q8NEM2 672 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 ZSCAN31Q96LW9 406 aaPredicted RBP7.07□□□□□ -1.28
HMGCL-206ENST00000496907 NECAB3Q96P71 396 aaPredicted RBP7.07□□□□□ -1.28
HMGCL-206ENST00000496907 ZKSCAN3Q9BRR0 538 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 AGXT2Q9BYV1 514 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 MROH8Q9H579 483 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 PDRG1Q9NUG6 133 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 SLC5A4Q9NY91 659 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 MORF4L1Q9UBU8 362 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 FBXO40Q9UH90 709 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 PPP1R9AQ9ULJ8 1098 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 ADAMTS5Q9UNA0 930 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 ARIH1Q9Y4X5 557 aaPredicted RBP7.07□□□□□ -1.28
HMGCL-206ENST00000496907 MYH1P12882 1939 aa7.07□□□□□ -1.28
HMGCL-206ENST00000496907 MYO5AQ9Y4I1 1855 aaKnown RBP7.07□□□□□ -1.28
HMGCL-206ENST00000496907 ZDBF2Q9HCK1 2354 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 ADGRA2Q96PE1 1338 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 PALM3A6NDB9 673 aaPredicted RBP7.06□□□□□ -1.28
HMGCL-206ENST00000496907 TMEM232C9JQI7 657 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 KLRF2D3W0D1 207 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 VWA5AO00534 786 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 ZBTB43O43298 467 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 NMT2O60551 498 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 CDKL5O76039 1030 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 PDHBP11177 359 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 FOSL2P15408 326 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 CAPN2P17655 700 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 NEK4P51957 841 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 ZNF543Q08ER8 600 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 TROAPQ12815 778 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 ADCK5Q3MIX3 580 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 FAM83BQ5T0W9 1011 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 TREML2Q5T2D2 321 aa7.06□□□□□ -1.28
HMGCL-206ENST00000496907 FAM109BQ6ICB4 259 aaPredicted RBP7.06□□□□□ -1.28
HMGCL-206ENST00000496907 Q6ZUG5 572 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms