RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 FXR1P51114 621 aaKnown RBP eCLIP9.23□□□□□ -0.93
SRRM1-220ENST00000496882 HAND2P61296 217 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 LRRC26Q2I0M4 334 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 TKFCQ3LXA3 575 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 CCDC178Q5BJE1 867 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 PRAMEF19Q5SWL8 479 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 AKNAD1Q5T1N1 836 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 GJC2Q5T442 439 aaPredicted RBP9.23□□□□□ -0.93
SRRM1-220ENST00000496882 RCSD1Q6JBY9 416 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 CWC27Q6UX04 472 aaKnown RBP9.23□□□□□ -0.93
SRRM1-220ENST00000496882 KCTD1Q719H9 257 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 ZNF589Q86UQ0 364 aaPredicted RBP9.23□□□□□ -0.93
SRRM1-220ENST00000496882 TRPV1Q8NER1 839 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 ESR2Q92731 530 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 CHMP4CQ96CF2 233 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 DCBLD2Q96PD2 775 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 ARID3AQ99856 593 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 LBHD1Q9BQE6 289 aaPredicted RBP9.23□□□□□ -0.93
SRRM1-220ENST00000496882 REPIN1Q9BWE0 567 aaKnown RBP9.23□□□□□ -0.93
SRRM1-220ENST00000496882 ACAD9Q9H845 621 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 CDHR5Q9HBB8 845 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 SPC25Q9HBM1 224 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 XPNPEP3Q9NQH7 507 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 ZHX1Q9UKY1 873 aaPredicted RBP9.23□□□□□ -0.93
SRRM1-220ENST00000496882 SYNGAP1Q96PV0 1343 aa9.23□□□□□ -0.93
SRRM1-220ENST00000496882 COL11A1P12107 1806 aaPredicted RBP9.22□□□□□ -0.93
SRRM1-220ENST00000496882 PARP14Q460N5 1801 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 POTEB2H3BUK9 544 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 FOXP2O15409 715 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 NMT2O60551 498 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 ALAS1P13196 640 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 IMMTQ16891 758 aaKnown RBP9.22□□□□□ -0.93
SRRM1-220ENST00000496882 CCDC174Q6PII3 467 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 IQCA1Q86XH1 822 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 SLC39A7Q92504 469 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 GPCPD1Q9NPB8 672 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 INCENPQ9NQS7 918 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 NPDC1Q9NQX5 325 aaPredicted RBP9.22□□□□□ -0.93
SRRM1-220ENST00000496882 RNF146Q9NTX7 359 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 TCP11L1Q9NUJ3 509 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 CTNNA3Q9UI47 895 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 PNMA2Q9UL42 364 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 FAM184BQ9ULE4 1060 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 ATP11BQ9Y2G3 1177 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 RIPK3Q9Y572 518 aa9.22□□□□□ -0.93
SRRM1-220ENST00000496882 IGHA2P01877 340 aa9.21□□□□□ -0.94
SRRM1-220ENST00000496882 FGRP09769 529 aa9.21□□□□□ -0.94
SRRM1-220ENST00000496882 BMP8BP34820 402 aa9.21□□□□□ -0.94
SRRM1-220ENST00000496882 RTP1P59025 263 aa9.21□□□□□ -0.94
SRRM1-220ENST00000496882 MDM2Q00987 491 aaPredicted RBP9.21□□□□□ -0.94
SRRM1-220ENST00000496882 LRRC41Q15345 812 aa9.21□□□□□ -0.94
SRRM1-220ENST00000496882 RUFY2Q8WXA3 655 aa9.21□□□□□ -0.94
SRRM1-220ENST00000496882 TTC14Q96N46 770 aa9.21□□□□□ -0.94
SRRM1-220ENST00000496882 TRERF1Q96PN7 1200 aa9.21□□□□□ -0.94
SRRM1-220ENST00000496882 TMUB1Q9BVT8 246 aa9.21□□□□□ -0.94
SRRM1-220ENST00000496882 UBE2OQ9C0C9 1292 aaKnown RBP9.21□□□□□ -0.94
SRRM1-220ENST00000496882 IL17RBQ9NRM6 502 aa9.21□□□□□ -0.94
SRRM1-220ENST00000496882 CCPG1Q9ULG6 757 aa9.21□□□□□ -0.94
SRRM1-220ENST00000496882 FRMPD3Q5JV73 1810 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 DNAJC25-GNG10A0A024R161 153 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 ASB14A6NK59 587 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 ADCYAP1R1P41586 468 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 MAGEA10P43363 369 aaPredicted RBP9.2□□□□□ -0.94
SRRM1-220ENST00000496882 ACVR2BQ13705 512 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 SYDE2Q5VT97 1194 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 MAMDC4Q6UXC1 1216 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 NSMFQ6X4W1 530 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 SLC39A5Q6ZMH5 540 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 NOL8Q76FK4 1167 aaKnown RBP9.2□□□□□ -0.94
SRRM1-220ENST00000496882 NUP133Q8WUM0 1156 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 FERMT2Q96AC1 680 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 AGBL1Q96MI9 1066 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 MPHOSPH6Q99547 160 aaKnown RBP9.2□□□□□ -0.94
SRRM1-220ENST00000496882 GDF15Q99988 308 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 TMEM47Q9BQJ4 181 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 DSCC1Q9BVC3 393 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 ABHD16BQ9H3Z7 469 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 CNNM2Q9H8M5 875 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 PRDM5Q9NQX1 630 aaPredicted RBP9.2□□□□□ -0.94
SRRM1-220ENST00000496882 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.2□□□□□ -0.94
SRRM1-220ENST00000496882 PRR12Q9ULL5 1215 aa9.2□□□□□ -0.94
SRRM1-220ENST00000496882 PGK1P00558 417 aa9.19□□□□□ -0.94
SRRM1-220ENST00000496882 ICAM1P05362 532 aa9.19□□□□□ -0.94
SRRM1-220ENST00000496882 ZNF865P0CJ78 1059 aaPredicted RBP9.19□□□□□ -0.94
SRRM1-220ENST00000496882 TAL1P17542 331 aaPredicted RBP9.19□□□□□ -0.94
SRRM1-220ENST00000496882 SSTR3P32745 418 aaPredicted RBP9.19□□□□□ -0.94
SRRM1-220ENST00000496882 IRX6P78412 446 aaPredicted RBP9.19□□□□□ -0.94
SRRM1-220ENST00000496882 TRDNQ13061 729 aa9.19□□□□□ -0.94
SRRM1-220ENST00000496882 GPATCH4Q5T3I0 446 aaKnown RBP9.19□□□□□ -0.94
SRRM1-220ENST00000496882 TYW1BQ6NUM6 668 aa9.19□□□□□ -0.94
SRRM1-220ENST00000496882 ARMCX2Q7L311 632 aa9.19□□□□□ -0.94
SRRM1-220ENST00000496882 TBC1D10CQ8IV04 446 aa9.19□□□□□ -0.94
SRRM1-220ENST00000496882 TDHQ8IZJ6 230 aa9.19□□□□□ -0.94
SRRM1-220ENST00000496882 PCSK9Q8NBP7 692 aaKnown RBP9.19□□□□□ -0.94
SRRM1-220ENST00000496882 VTI1AQ96AJ9 217 aa9.19□□□□□ -0.94
SRRM1-220ENST00000496882 UBAC1Q9BSL1 405 aa9.19□□□□□ -0.94
SRRM1-220ENST00000496882 TSEN34Q9BSV6 310 aaKnown RBP9.19□□□□□ -0.94
SRRM1-220ENST00000496882 KRT23Q9C075 422 aa9.19□□□□□ -0.94
SRRM1-220ENST00000496882 PRO3102Q9H379 93 aa9.19□□□□□ -0.94
SRRM1-220ENST00000496882 KAT14Q9H8E8 782 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms