RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 BOLA2Q9H3K6 86 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 CABP2Q9NPB3 220 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 RMND1Q9NWS8 449 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 WDR35Q9P2L0 1181 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 SUCLA2Q9P2R7 463 aaPredicted RBP8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 SATB2Q9UPW6 733 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 LEMD3Q9Y2U8 911 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 IQSEC2Q5JU85 1478 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 MYO5CQ9NQX4 1742 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 CCDC169A6NNP5 214 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 GOLGA8BA8MQT2 603 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 IPO5O00410 1097 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 GSTT1P30711 240 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 RFC5P40937 340 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 INHBEP58166 350 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 ITIH3Q06033 890 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 RRAGBQ5VZM2 374 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 HS2ST1Q7LGA3 356 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 TMEM110Q86TL2 294 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 AENQ8WTP8 325 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 SREK1Q8WXA9 508 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 NOX5Q96PH1 765 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 LRRC1Q9BTT6 524 aa8.98□□□□□ -0.97
CRNKL1-205ENST00000496549 KRT38O76015 456 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 POTEJP0CG39 1038 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 CCDC166P0CW27 439 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 XBP1P17861 261 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 UBE4AQ14139 1066 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 MMGT1Q8N4V1 131 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 SMCR8Q8TEV9 937 aaPredicted RBP8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 ATP6V0A1Q93050 837 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 PPP1R14BQ96C90 147 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 PLEKHF1Q96S99 279 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 ITSN2Q9NZM3 1697 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 BACH1O14867 736 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 LSM1O15116 133 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 IFNAR2P48551 515 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 MAGOHP61326 146 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 KPNB1Q14974 876 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 TTMPQ5BVD1 217 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 LRIG3Q6UXM1 1119 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 KLHL7Q8IXQ5 586 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 WASF1Q92558 559 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 CASP10Q92851 521 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 MAGOHBQ96A72 148 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 CDK5RAP3Q96JB5 506 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 RPS6KC1Q96S38 1066 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 EIF2AQ9BY44 585 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 DRC3Q9H069 523 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 ETNK1Q9HBU6 452 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 NUTM2BA6NNL0 878 aaPredicted RBP8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 NUTM2EB1AL46 878 aaPredicted RBP8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 ACADSP16219 412 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 AFMP43652 599 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 NEK2P51955 445 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 EIF3BP55884 814 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 NCAPHQ15003 741 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 WDR75Q8IWA0 830 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 USHBP1Q8N6Y0 703 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 SPATA4Q8NEY3 305 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 IFIH1Q9BYX4 1025 aaKnown RBP8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 KCNK9Q9NPC2 374 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 NKIRAS1Q9NYS0 192 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 RASAL2Q9UJF2 1139 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 CLIC4Q9Y696 253 aa8.97□□□□□ -0.97
CRNKL1-205ENST00000496549 P4HA2O15460 535 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 RASA3Q14644 834 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 RRS1Q15050 365 aaKnown RBP8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 CDC37Q16543 378 aaPredicted RBP8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 CAVIN3Q969G5 261 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 DYDC2Q96IM9 177 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 SAMSN1Q9NSI8 373 aaKnown RBP8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 ABHD10Q9NUJ1 306 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 NLRP2Q9NX02 1062 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 CIDEBQ9UHD4 219 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 DNM1LO00429 736 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 MTIF2P46199 727 aaKnown RBP8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 FLIIQ13045 1269 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 TRIM22Q8IYM9 498 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.96□□□□□ -0.973e-9■■■■■ 80.2
CRNKL1-205ENST00000496549 UIMC1Q96RL1 719 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 NACA2Q9H009 215 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 LRCH1Q9Y2L9 728 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 ATP8A1Q9Y2Q0 1164 aa8.96□□□□□ -0.97
CRNKL1-205ENST00000496549 PNMA6EA0A0J9YXQ4 647 aa8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 TRAPPC3O43617 180 aa8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 LINGO3P0C6S8 592 aa8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 TMOD1P28289 359 aa8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 PDE1BQ01064 536 aa8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 TTF1Q15361 905 aaPredicted RBP8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 DENND2CQ68D51 928 aa8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 DZIP3Q86Y13 1208 aaKnown RBP8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 VPS52Q8N1B4 723 aa8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 MORC4Q8TE76 937 aa8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 XPO6Q96QU8 1125 aaKnown RBP8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 OSBPL7Q9BZF2 842 aa8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 TAB2Q9NYJ8 693 aa8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 UTP11Q9Y3A2 253 aaKnown RBP8.96□□□□□ -0.98
CRNKL1-205ENST00000496549 ATP6V1C1P21283 382 aa8.95□□□□□ -0.98
CRNKL1-205ENST00000496549 STAT6P42226 847 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms