RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PCDHB6Q9Y5E3 794 aa7.86□□□□□ -1.15
USP39-219ENST00000496047 hCG_1642624A0A1W2PR95 340 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 POLR2DO15514 142 aaKnown RBP7.85□□□□□ -1.15
USP39-219ENST00000496047 ENTPD3O75355 529 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 RGS20O76081 388 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 POLD1P28340 1107 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 PRPHP41219 470 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 MMP14P50281 582 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 TOB1P50616 345 aaPredicted RBP7.85□□□□□ -1.15
USP39-219ENST00000496047 ADCY7P51828 1080 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 MYL5Q02045 173 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 GABPAQ06546 454 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 SEMA3FQ13275 785 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 AOC3Q16853 763 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 TMEM266Q2M3C6 531 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 CDC42EP5Q6NZY7 148 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 DTHD1Q6ZMT9 781 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 PLA2G4DQ86XP0 818 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 HOMER1Q86YM7 354 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 KIAA0825Q8IV33 1275 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 FOXP4Q8IVH2 680 aaPredicted RBP7.85□□□□□ -1.15
USP39-219ENST00000496047 OGFOD1Q8N543 542 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 IQUBQ8NA54 791 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 MLKLQ8NB16 471 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 SPC24Q8NBT2 197 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 ANKRD20A12PQ8NF67 263 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 DCAF4Q8WV16 495 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 PIBF1Q8WXW3 757 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 GPKOWQ92917 476 aaPredicted RBP eCLIP7.85□□□□□ -1.15
USP39-219ENST00000496047 CLIC6Q96NY7 704 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 PSMD1Q99460 953 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 IDI2Q9BXS1 227 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 CSRNP2Q9H175 543 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 NPDC1Q9NQX5 325 aaPredicted RBP7.85□□□□□ -1.15
USP39-219ENST00000496047 MTMR4Q9NYA4 1195 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 IMPACTQ9P2X3 320 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 TUBE1Q9UJT0 475 aa7.85□□□□□ -1.15
USP39-219ENST00000496047 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.85□□□□□ -1.15
USP39-219ENST00000496047 VWA3AA6NCI4 1184 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 SMIM22K7EJ46 135 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 STXBP3O00186 592 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 BIN1O00499 593 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 MYL1P05976 194 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 PDHBP11177 359 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 FECHP22830 423 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 MCM7P33993 719 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 PPP1R2P41236 205 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 ATP2B2Q01814 1243 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 PNOCQ13519 176 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 IQCB1Q15051 598 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 ZNF174Q15697 407 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 TPD52L1Q16890 204 aaPredicted RBP7.84□□□□□ -1.15
USP39-219ENST00000496047 CERKLQ49MI3 558 aaPredicted RBP7.84□□□□□ -1.15
USP39-219ENST00000496047 DACT2Q5SW24 774 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 WWC2Q6AWC2 1192 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 TMEM179Q6ZVK1 233 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 NEK8Q86SG6 692 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 NIM1KQ8IY84 436 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 REXO1Q8N1G1 1221 aaKnown RBP7.84□□□□□ -1.15
USP39-219ENST00000496047 STAG2Q8N3U4 1231 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 LARGE2Q8N3Y3 721 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 CERS5Q8N5B7 392 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 CCDC150Q8NCX0 1101 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 RBM46Q8TBY0 533 aaKnown RBP7.84□□□□□ -1.15
USP39-219ENST00000496047 TNFRSF25Q93038 417 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 DHX58Q96C10 678 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 KLRG1Q96E93 195 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 AK8Q96MA6 479 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 ADAM33Q9BZ11 813 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 ZMYND12Q9H0C1 365 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 CUEDC2Q9H467 287 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 SH2D4AQ9H788 454 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 KANSL2Q9H9L4 492 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 ARHGEF10LQ9HCE6 1279 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 SERTAD1Q9UHV2 236 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 HERC5Q9UII4 1024 aaKnown RBP7.84□□□□□ -1.15
USP39-219ENST00000496047 SYNPO2Q9UMS6 1093 aa7.84□□□□□ -1.15
USP39-219ENST00000496047 SMCO2A6NFE2 343 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 PPP1R3GB7ZBB8 358 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 UBE2Q2LH0YL09 131 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 CCP110O43303 1012 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 SERPINC1P01008 464 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 OR52Z1P0C646 297 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 SLFN14P0C7P3 912 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 AKR1B1P15121 316 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 CHRNA5P30532 468 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 HOXA7P31268 230 aaPredicted RBP7.83□□□□□ -1.16
USP39-219ENST00000496047 UBA7P41226 1012 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 STAT6P42226 847 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 NOVP48745 357 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 TNNI2P48788 182 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 PRSS12P56730 875 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 ICA1Q05084 483 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 STIM1Q13586 685 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 DPCR1Q3MIW9 517 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 CFAP100Q494V2 611 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 THSD4Q6ZMP0 1018 aa7.83□□□□□ -1.16
USP39-219ENST00000496047 DHX40Q8IX18 779 aaKnown RBP7.83□□□□□ -1.16
USP39-219ENST00000496047 LRRC47Q8N1G4 583 aaKnown RBP7.83□□□□□ -1.16
USP39-219ENST00000496047 PDILTQ8N807 584 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms