RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 CCDC96Q2M329 555 aa17.43■□□□□ 0.38
PTPN18-216ENST00000495400 MUM1L1Q5H9M0 696 aa17.43■□□□□ 0.38
PTPN18-216ENST00000495400 RASGRP2Q7LDG7 609 aa17.43■□□□□ 0.38
PTPN18-216ENST00000495400 DCAF4Q8WV16 495 aa17.43■□□□□ 0.38
PTPN18-216ENST00000495400 MYLIPQ8WY64 445 aa17.43■□□□□ 0.38
PTPN18-216ENST00000495400 CRBNQ96SW2 442 aa17.43■□□□□ 0.38
PTPN18-216ENST00000495400 CCPG1Q9ULG6 757 aa17.43■□□□□ 0.38
PTPN18-216ENST00000495400 GNEQ9Y223 722 aaKnown RBP17.43■□□□□ 0.38
PTPN18-216ENST00000495400 LRRC37A2A6NM11 1700 aa17.43■□□□□ 0.38
PTPN18-216ENST00000495400 A0A0C4DFX4 3053 aa17.43■□□□□ 0.38
PTPN18-216ENST00000495400 LCTP09848 1927 aa17.43■□□□□ 0.38
PTPN18-216ENST00000495400 FGAP02671 866 aa17.42■□□□□ 0.38
PTPN18-216ENST00000495400 HDAC1Q13547 482 aaPredicted RBP17.42■□□□□ 0.38
PTPN18-216ENST00000495400 MCMDC2Q4G0Z9 681 aa17.42■□□□□ 0.38
PTPN18-216ENST00000495400 NSMFQ6X4W1 530 aa17.42■□□□□ 0.38
PTPN18-216ENST00000495400 TICAM2Q86XR7 235 aa17.42■□□□□ 0.38
PTPN18-216ENST00000495400 FAM126BQ8IXS8 530 aa17.42■□□□□ 0.38
PTPN18-216ENST00000495400 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.42■□□□□ 0.38
PTPN18-216ENST00000495400 AP5M1Q9H0R1 490 aa17.42■□□□□ 0.38
PTPN18-216ENST00000495400 TOMM22Q9NS69 142 aa17.42■□□□□ 0.38
PTPN18-216ENST00000495400 ASTN1O14525 1302 aa17.42■□□□□ 0.38
PTPN18-216ENST00000495400 CABYRO75952 493 aa17.41■□□□□ 0.38
PTPN18-216ENST00000495400 ICAM1P05362 532 aa17.41■□□□□ 0.38
PTPN18-216ENST00000495400 IQSEC1Q6DN90 963 aa17.41■□□□□ 0.38
PTPN18-216ENST00000495400 BTNL9Q6UXG8 535 aa17.41■□□□□ 0.38
PTPN18-216ENST00000495400 TLK2Q86UE8 772 aa17.41■□□□□ 0.38
PTPN18-216ENST00000495400 TMEM199Q8N511 208 aa17.41■□□□□ 0.38
PTPN18-216ENST00000495400 MAFAQ8NHW3 353 aaPredicted RBP17.41■□□□□ 0.38
PTPN18-216ENST00000495400 FAM227BQ96M60 508 aa17.41■□□□□ 0.38
PTPN18-216ENST00000495400 RANBP17Q9H2T7 1088 aaKnown RBP17.41■□□□□ 0.38
PTPN18-216ENST00000495400 TCP11L1Q9NUJ3 509 aa17.41■□□□□ 0.38
PTPN18-216ENST00000495400 A0A0D9SFI3 127 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 DYNC1LI2O43237 492 aaPredicted RBP17.4■□□□□ 0.38
PTPN18-216ENST00000495400 ZEB2O60315 1214 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 CD4P01730 458 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 HSPD1P10809 573 aaKnown RBP17.4■□□□□ 0.38
PTPN18-216ENST00000495400 TOP1P11387 765 aaKnown RBP17.4■□□□□ 0.38
PTPN18-216ENST00000495400 SMPD1P17405 629 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 SLC16A2P36021 539 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 FSCN1Q16658 493 aaKnown RBP17.4■□□□□ 0.38
PTPN18-216ENST00000495400 RRP12Q5JTH9 1297 aaKnown RBP17.4■□□□□ 0.38
PTPN18-216ENST00000495400 TMEM240Q5SV17 173 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 TTBK2Q6IQ55 1244 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 TAPT1Q6NXT6 567 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 CXCL17Q6UXB2 119 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 C16orf59Q7L2K0 433 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 EEPD1Q7L9B9 569 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 SLC43A3Q8NBI5 491 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 TMEM47Q9BQJ4 181 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 COL25A1Q9BXS0 654 aaPredicted RBP17.4■□□□□ 0.38
PTPN18-216ENST00000495400 PPP1R12CQ9BZL4 782 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 PDGFCQ9NRA1 345 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 Q9Y3F1 56 aa17.4■□□□□ 0.38
PTPN18-216ENST00000495400 DDX49Q9Y6V7 483 aaKnown RBP17.4■□□□□ 0.38
PTPN18-216ENST00000495400 FOSL2P15408 326 aa17.39■□□□□ 0.37
PTPN18-216ENST00000495400 CSF2RAP15509 400 aa17.39■□□□□ 0.37
PTPN18-216ENST00000495400 DNAJB2P25686 324 aa17.39■□□□□ 0.37
PTPN18-216ENST00000495400 SYDE2Q5VT97 1194 aa17.39■□□□□ 0.37
PTPN18-216ENST00000495400 FBXO16Q8IX29 292 aaPredicted RBP17.39■□□□□ 0.37
PTPN18-216ENST00000495400 MORC4Q8TE76 937 aa17.39■□□□□ 0.37
PTPN18-216ENST00000495400 SEZ6LQ9BYH1 1024 aa17.39■□□□□ 0.37
PTPN18-216ENST00000495400 VTA1Q9NP79 307 aa17.39■□□□□ 0.37
PTPN18-216ENST00000495400 ZMYM6O95789 1325 aa17.39■□□□□ 0.37
PTPN18-216ENST00000495400 NMIQ13287 307 aaPredicted RBP17.38■□□□□ 0.37
PTPN18-216ENST00000495400 ITGA7Q13683 1181 aa17.38■□□□□ 0.37
PTPN18-216ENST00000495400 BAATQ14032 418 aaPredicted RBP17.38■□□□□ 0.37
PTPN18-216ENST00000495400 KIAA1211Q6ZU35 1233 aa17.38■□□□□ 0.37
PTPN18-216ENST00000495400 PURBQ96QR8 312 aaKnown RBP17.38■□□□□ 0.37
PTPN18-216ENST00000495400 GPCPD1Q9NPB8 672 aa17.38■□□□□ 0.37
PTPN18-216ENST00000495400 ADD3Q9UEY8 706 aaKnown RBP17.38■□□□□ 0.37
PTPN18-216ENST00000495400 FRMPD2Q68DX3 1309 aaPredicted RBP17.38■□□□□ 0.37
PTPN18-216ENST00000495400 LOC102724159A0A0B4J2E5 919 aa17.37■□□□□ 0.37
PTPN18-216ENST00000495400 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
PTPN18-216ENST00000495400 ACRP10323 421 aa17.37■□□□□ 0.37
PTPN18-216ENST00000495400 PTGS1P23219 599 aa17.37■□□□□ 0.37
PTPN18-216ENST00000495400 ALDH5A1P51649 535 aaPredicted RBP17.37■□□□□ 0.37
PTPN18-216ENST00000495400 PWP2Q15269 919 aaKnown RBP17.37■□□□□ 0.37
PTPN18-216ENST00000495400 RASIP1Q5U651 963 aa17.37■□□□□ 0.37
PTPN18-216ENST00000495400 PSRC1Q6PGN9 363 aaPredicted RBP17.37■□□□□ 0.37
PTPN18-216ENST00000495400 ZNF365Q70YC5 407 aa17.37■□□□□ 0.37
PTPN18-216ENST00000495400 ZNF589Q86UQ0 364 aaPredicted RBP17.37■□□□□ 0.37
PTPN18-216ENST00000495400 TTC14Q96N46 770 aa17.37■□□□□ 0.37
PTPN18-216ENST00000495400 PNMA2Q9UL42 364 aa17.37■□□□□ 0.37
PTPN18-216ENST00000495400 CCDC171Q6TFL3 1326 aa17.37■□□□□ 0.37
PTPN18-216ENST00000495400 NFIBO00712 420 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 PDHBP11177 359 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 PCP11498 1178 aaKnown RBP17.36■□□□□ 0.37
PTPN18-216ENST00000495400 CYP2C18P33260 490 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 HAND2P61296 217 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 GRIN2CQ14957 1233 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 AKNAD1Q5T1N1 836 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 TMEM63BQ5T3F8 832 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 MFSD6Q6ZSS7 791 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 RILPL2Q969X0 211 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 TIFAQ96CG3 184 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 LNPKQ9C0E8 428 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 ZNF576Q9H609 170 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 IL23AQ9NPF7 189 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 GRIN2DO15399 1336 aa17.36■□□□□ 0.37
PTPN18-216ENST00000495400 UNC80Q8N2C7 3258 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms