RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 SERPINB13Q9UIV8 391 aa18.6■□□□□ 0.57
CBX4-204ENST00000495122 PALM3A6NDB9 673 aaPredicted RBP18.59■□□□□ 0.57
CBX4-204ENST00000495122 GNRH1P01148 92 aa18.59■□□□□ 0.57
CBX4-204ENST00000495122 CTGFP29279 349 aa18.59■□□□□ 0.57
CBX4-204ENST00000495122 EVX2Q03828 476 aa18.59■□□□□ 0.57
CBX4-204ENST00000495122 RESP18Q5W5W9 173 aa18.59■□□□□ 0.57
CBX4-204ENST00000495122 DAGLBQ8NCG7 672 aa18.59■□□□□ 0.57
CBX4-204ENST00000495122 CCDC12Q8WUD4 166 aaPredicted RBP18.59■□□□□ 0.57
CBX4-204ENST00000495122 PARK7Q99497 189 aaKnown RBP18.59■□□□□ 0.57
CBX4-204ENST00000495122 TMEM47Q9BQJ4 181 aa18.59■□□□□ 0.57
CBX4-204ENST00000495122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.59■□□□□ 0.57
CBX4-204ENST00000495122 MAD2L2Q9UI95 211 aa18.59■□□□□ 0.57
CBX4-204ENST00000495122 KCNJ14Q9UNX9 436 aa18.59■□□□□ 0.57
CBX4-204ENST00000495122 HPSEQ9Y251 543 aa18.59■□□□□ 0.57
CBX4-204ENST00000495122 MRVI1Q9Y6F6 885 aa18.59■□□□□ 0.57
CBX4-204ENST00000495122 GREB1LQ9C091 1923 aaPredicted RBP18.59■□□□□ 0.57
CBX4-204ENST00000495122 TRIM75PA6NK02 468 aa18.58■□□□□ 0.56
CBX4-204ENST00000495122 CAMK4Q16566 473 aa18.58■□□□□ 0.56
CBX4-204ENST00000495122 SLC9C1Q4G0N8 1177 aa18.58■□□□□ 0.56
CBX4-204ENST00000495122 FASTKD5Q7L8L6 764 aaKnown RBP18.58■□□□□ 0.56
CBX4-204ENST00000495122 CCDC84Q86UT8 332 aaPredicted RBP18.58■□□□□ 0.56
CBX4-204ENST00000495122 CCDC82Q8N4S0 544 aa18.58■□□□□ 0.56
CBX4-204ENST00000495122 RNF214Q8ND24 703 aa18.58■□□□□ 0.56
CBX4-204ENST00000495122 ANO10Q9NW15 660 aa18.58■□□□□ 0.56
CBX4-204ENST00000495122 IGKV6D-41A0A0C4DH26 115 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 CYP2C8P10632 490 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 BCRP11274 1271 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 PTPREP23469 700 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 PRMT2P55345 433 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 TPRNQ4KMQ1 711 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 GADL1Q6ZQY3 521 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 CMTR1Q8N1G2 835 aaKnown RBP18.57■□□□□ 0.56
CBX4-204ENST00000495122 SLC44A5Q8NCS7 719 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 TNFRSF25Q93038 417 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 FAM13BQ9NYF5 915 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 VPS54Q9P1Q0 977 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 HERC5Q9UII4 1024 aaKnown RBP18.57■□□□□ 0.56
CBX4-204ENST00000495122 HOOK1Q9UJC3 728 aaKnown RBP18.57■□□□□ 0.56
CBX4-204ENST00000495122 STX8Q9UNK0 236 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 SLC45A1Q9Y2W3 748 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 PARP14Q460N5 1801 aa18.57■□□□□ 0.56
CBX4-204ENST00000495122 PARP1P09874 1014 aaKnown RBP18.56■□□□□ 0.56
CBX4-204ENST00000495122 PFKFB1P16118 471 aa18.56■□□□□ 0.56
CBX4-204ENST00000495122 TOB1P50616 345 aaPredicted RBP18.56■□□□□ 0.56
CBX4-204ENST00000495122 NDUFA8P51970 172 aa18.56■□□□□ 0.56
CBX4-204ENST00000495122 RRP1BQ14684 758 aaKnown RBP18.56■□□□□ 0.56
CBX4-204ENST00000495122 ASPRV1Q53RT3 343 aa18.56■□□□□ 0.56
CBX4-204ENST00000495122 CKAP2LQ8IYA6 745 aa18.56■□□□□ 0.56
CBX4-204ENST00000495122 FERMT2Q96AC1 680 aa18.56■□□□□ 0.56
CBX4-204ENST00000495122 CCDC34Q96HJ3 373 aa18.56■□□□□ 0.56
CBX4-204ENST00000495122 TRIM47Q96LD4 638 aa18.56■□□□□ 0.56
CBX4-204ENST00000495122 SDF4Q9BRK5 362 aa18.56■□□□□ 0.56
CBX4-204ENST00000495122 NAT10Q9H0A0 1025 aaKnown RBP18.56■□□□□ 0.56
CBX4-204ENST00000495122 MTMR4Q9NYA4 1195 aa18.56■□□□□ 0.56
CBX4-204ENST00000495122 CCDC39Q9UFE4 941 aa18.56■□□□□ 0.56
CBX4-204ENST00000495122 SRPRBQ9Y5M8 271 aaKnown RBP18.56■□□□□ 0.56
CBX4-204ENST00000495122 FRMPD3Q5JV73 1810 aa18.56■□□□□ 0.56
CBX4-204ENST00000495122 ALPK3Q96L96 1907 aa18.55■□□□□ 0.56
CBX4-204ENST00000495122 ZNF202O95125 648 aa18.55■□□□□ 0.56
CBX4-204ENST00000495122 CAP2P40123 477 aa18.55■□□□□ 0.56
CBX4-204ENST00000495122 SYKP43405 635 aa18.55■□□□□ 0.56
CBX4-204ENST00000495122 PSMC4P43686 418 aa18.55■□□□□ 0.56
CBX4-204ENST00000495122 NLRP5P59047 1200 aa18.55■□□□□ 0.56
CBX4-204ENST00000495122 ZRSR1Q15695 479 aaKnown RBP18.55■□□□□ 0.56
CBX4-204ENST00000495122 PRPF38BQ5VTL8 546 aaKnown RBP18.55■□□□□ 0.56
CBX4-204ENST00000495122 PYM1Q9BRP8 204 aaKnown RBP18.55■□□□□ 0.56
CBX4-204ENST00000495122 A0A1B0GVL5 298 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 ECM2O94769 699 aaPredicted RBP18.54■□□□□ 0.56
CBX4-204ENST00000495122 SNHG28P0DPA3 235 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 OSBPP22059 807 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 NR5A1Q13285 461 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 NPY5RQ15761 445 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 ANO6Q4KMQ2 910 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 KANK3Q6NY19 840 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 FOXP4Q8IVH2 680 aaPredicted RBP18.54■□□□□ 0.56
CBX4-204ENST00000495122 SH3TC2Q8TF17 1288 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 CEP95Q96GE4 821 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 DNAJC18Q9H819 358 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 BARHL2Q9NY43 387 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 PI4KBQ9UBF8 816 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 SRRDQ9UH36 339 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 USP25Q9UHP3 1055 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 FBXO2Q9UK22 296 aaPredicted RBP18.54■□□□□ 0.56
CBX4-204ENST00000495122 PCDHA4Q9UN74 947 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 AGTPBP1Q9UPW5 1226 aa18.54■□□□□ 0.56
CBX4-204ENST00000495122 MYPNQ86TC9 1320 aa18.53■□□□□ 0.56
CBX4-204ENST00000495122 KLRF2D3W0D1 207 aa18.53■□□□□ 0.56
CBX4-204ENST00000495122 TTLL1O95922 423 aa18.53■□□□□ 0.56
CBX4-204ENST00000495122 EN2P19622 333 aaPredicted RBP18.53■□□□□ 0.56
CBX4-204ENST00000495122 ORC2Q13416 577 aaPredicted RBP18.53■□□□□ 0.56
CBX4-204ENST00000495122 SLC4A8Q2Y0W8 1093 aa18.53■□□□□ 0.56
CBX4-204ENST00000495122 SHC4Q6S5L8 630 aa18.53■□□□□ 0.56
CBX4-204ENST00000495122 METTL16Q86W50 562 aaKnown RBP18.53■□□□□ 0.56
CBX4-204ENST00000495122 CEP57L1Q8IYX8 460 aa18.53■□□□□ 0.56
CBX4-204ENST00000495122 BLIDQ8IZY5 108 aa18.53■□□□□ 0.56
CBX4-204ENST00000495122 PROCA1Q8NCQ7 364 aaPredicted RBP18.53■□□□□ 0.56
CBX4-204ENST00000495122 OXER1Q8TDS5 423 aa18.53■□□□□ 0.56
CBX4-204ENST00000495122 RRP36Q96EU6 259 aaKnown RBP18.53■□□□□ 0.56
CBX4-204ENST00000495122 BPIFA3Q9BQP9 254 aa18.53■□□□□ 0.56
CBX4-204ENST00000495122 CABP5Q9NP86 173 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms