RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 PCDHA4Q9UN74 947 aa15.56■□□□□ 0.08
APTX-231ENST00000494973 THSD7BQ9C0I4 1608 aa15.56■□□□□ 0.08
APTX-231ENST00000494973 RBBP6Q7Z6E9 1792 aaKnown RBP15.55■□□□□ 0.08
APTX-231ENST00000494973 SMCO2A6NFE2 343 aa15.55■□□□□ 0.08
APTX-231ENST00000494973 PPFIA3O75145 1194 aa15.55■□□□□ 0.08
APTX-231ENST00000494973 HSPA6P17066 643 aa15.55■□□□□ 0.08
APTX-231ENST00000494973 GRM1Q13255 1194 aa15.55■□□□□ 0.08
APTX-231ENST00000494973 USH1GQ495M9 461 aa15.55■□□□□ 0.08
APTX-231ENST00000494973 SNRNP48Q6IEG0 339 aaKnown RBP15.55■□□□□ 0.08
APTX-231ENST00000494973 BRAPQ7Z569 592 aa15.55■□□□□ 0.08
APTX-231ENST00000494973 RIOX2Q8IUF8 465 aa15.55■□□□□ 0.08
APTX-231ENST00000494973 CPXCR1Q8N123 301 aa15.55■□□□□ 0.08
APTX-231ENST00000494973 SHCBP1Q8NEM2 672 aa15.55■□□□□ 0.08
APTX-231ENST00000494973 FOXP1Q9H334 677 aaPredicted RBP15.55■□□□□ 0.08
APTX-231ENST00000494973 PSTPIP2Q9H939 334 aa15.55■□□□□ 0.08
APTX-231ENST00000494973 EHMT1Q9H9B1 1298 aa15.55■□□□□ 0.08
APTX-231ENST00000494973 RIC8AQ9NPQ8 531 aa15.55■□□□□ 0.08
APTX-231ENST00000494973 MORF4L1Q9UBU8 362 aa15.55■□□□□ 0.08
APTX-231ENST00000494973 ZNF536O15090 1300 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 PPP1R11O60927 126 aaPredicted RBP15.54■□□□□ 0.08
APTX-231ENST00000494973 ZSCAN22P10073 491 aaPredicted RBP15.54■□□□□ 0.08
APTX-231ENST00000494973 AP3B2Q13367 1082 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 PLS1Q14651 629 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 TMEM132BQ14DG7 1078 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 FAM110CQ1W6H9 321 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 DIS3L2Q8IYB7 885 aaKnown RBP15.54■□□□□ 0.08
APTX-231ENST00000494973 BLIDQ8IZY5 108 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 REXO1Q8N1G1 1221 aaKnown RBP15.54■□□□□ 0.08
APTX-231ENST00000494973 GPRC5AQ8NFJ5 357 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 COA7Q96BR5 231 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 AIFM3Q96NN9 605 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 PTPN18Q99952 460 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 SPATC1LQ9H0A9 340 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 MROH8Q9H579 483 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 ACAD9Q9H845 621 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 RAVER2Q9HCJ3 691 aaKnown RBP15.54■□□□□ 0.08
APTX-231ENST00000494973 MTMR6Q9Y217 621 aa15.54■□□□□ 0.08
APTX-231ENST00000494973 COL11A1P12107 1806 aaPredicted RBP15.54■□□□□ 0.08
APTX-231ENST00000494973 PFASO15067 1338 aa15.53■□□□□ 0.08
APTX-231ENST00000494973 PIK3CDO00329 1044 aa15.53■□□□□ 0.08
APTX-231ENST00000494973 IGF2BP3O00425 579 aaKnown RBP eCLIP15.53■□□□□ 0.08
APTX-231ENST00000494973 BRD1O95696 1058 aa15.53■□□□□ 0.08
APTX-231ENST00000494973 FOSP01100 380 aaPredicted RBP15.53■□□□□ 0.08
APTX-231ENST00000494973 ALAS1P13196 640 aa15.53■□□□□ 0.08
APTX-231ENST00000494973 C1QTNF8P60827 252 aa15.53■□□□□ 0.08
APTX-231ENST00000494973 ERVK-9P63128 1117 aa15.53■□□□□ 0.08
APTX-231ENST00000494973 ERVK-24P63145 666 aa15.53■□□□□ 0.08
APTX-231ENST00000494973 GHRHRQ02643 423 aa15.53■□□□□ 0.08
APTX-231ENST00000494973 MCTP1Q6DN14 999 aa15.53■□□□□ 0.08
APTX-231ENST00000494973 KRT25Q7Z3Z0 450 aa15.53■□□□□ 0.08
APTX-231ENST00000494973 CCAR1Q8IX12 1150 aaKnown RBP15.53■□□□□ 0.08
APTX-231ENST00000494973 PAGR1Q9BTK6 254 aa15.53■□□□□ 0.08
APTX-231ENST00000494973 RNF146Q9NTX7 359 aa15.53■□□□□ 0.08
APTX-231ENST00000494973 GCOM1H8Y6P7 765 aaPredicted RBP15.52■□□□□ 0.08
APTX-231ENST00000494973 CA12O43570 354 aa15.52■□□□□ 0.08
APTX-231ENST00000494973 F13A1P00488 732 aa15.52■□□□□ 0.08
APTX-231ENST00000494973 POLR2MP0CAP2 368 aa15.52■□□□□ 0.08
APTX-231ENST00000494973 CYP2C8P10632 490 aa15.52■□□□□ 0.08
APTX-231ENST00000494973 FOSBP53539 338 aa15.52■□□□□ 0.08
APTX-231ENST00000494973 SNAP25P60880 206 aa15.52■□□□□ 0.08
APTX-231ENST00000494973 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.52■□□□□ 0.08
APTX-231ENST00000494973 AGBL1Q96MI9 1066 aa15.52■□□□□ 0.08
APTX-231ENST00000494973 TRERF1Q96PN7 1200 aa15.52■□□□□ 0.08
APTX-231ENST00000494973 NOL7Q9UMY1 257 aaKnown RBP15.52■□□□□ 0.08
APTX-231ENST00000494973 KCNJ14Q9UNX9 436 aa15.52■□□□□ 0.08
APTX-231ENST00000494973 CCDC194A0A1B0GVG4 234 aa15.51■□□□□ 0.07
APTX-231ENST00000494973 SPDYE3A6NKU9 549 aa15.51■□□□□ 0.07
APTX-231ENST00000494973 TLR2O60603 784 aa15.51■□□□□ 0.07
APTX-231ENST00000494973 U2AF2P26368 475 aaKnown RBP eCLIP15.51■□□□□ 0.072e-7■□□□□ 10.5
APTX-231ENST00000494973 GUCY1B3Q02153 619 aa15.51■□□□□ 0.07
APTX-231ENST00000494973 TYW1BQ6NUM6 668 aa15.51■□□□□ 0.07
APTX-231ENST00000494973 NOSTRINQ8IVI9 506 aa15.51■□□□□ 0.07
APTX-231ENST00000494973 NAP1L4Q99733 375 aaKnown RBP15.51■□□□□ 0.07
APTX-231ENST00000494973 CFHR5Q9BXR6 569 aa15.51■□□□□ 0.07
APTX-231ENST00000494973 BTBD7Q9P203 1132 aa15.51■□□□□ 0.07
APTX-231ENST00000494973 RBPJLQ9UBG7 517 aa15.51■□□□□ 0.07
APTX-231ENST00000494973 ADGRA2Q96PE1 1338 aa15.5■□□□□ 0.07
APTX-231ENST00000494973 MAPK4P31152 587 aa15.5■□□□□ 0.07
APTX-231ENST00000494973 TRAPPC10P48553 1259 aa15.5■□□□□ 0.07
APTX-231ENST00000494973 VEGFBP49765 207 aa15.5■□□□□ 0.07
APTX-231ENST00000494973 ATL3Q6DD88 541 aa15.5■□□□□ 0.07
APTX-231ENST00000494973 RNF207Q6ZRF8 634 aa15.5■□□□□ 0.07
APTX-231ENST00000494973 NCAPG2Q86XI2 1143 aa15.5■□□□□ 0.07
APTX-231ENST00000494973 MPHOSPH6Q99547 160 aaKnown RBP15.5■□□□□ 0.07
APTX-231ENST00000494973 MOV10L1Q9BXT6 1211 aaKnown RBP15.5■□□□□ 0.07
APTX-231ENST00000494973 B4DLN1 442 aa15.49■□□□□ 0.07
APTX-231ENST00000494973 CNMDO75829 334 aa15.49■□□□□ 0.07
APTX-231ENST00000494973 CFBP00751 764 aa15.49■□□□□ 0.07
APTX-231ENST00000494973 HSD17B4P51659 736 aa15.49■□□□□ 0.07
APTX-231ENST00000494973 KCTD2Q14681 263 aa15.49■□□□□ 0.07
APTX-231ENST00000494973 NONOQ15233 471 aaKnown RBP eCLIP15.49■□□□□ 0.07
APTX-231ENST00000494973 RILPL1Q5EBL4 403 aa15.49■□□□□ 0.07
APTX-231ENST00000494973 ABRAQ8N0Z2 381 aa15.49■□□□□ 0.07
APTX-231ENST00000494973 ANKRD13CQ8N6S4 541 aa15.49■□□□□ 0.07
APTX-231ENST00000494973 CLEC4DQ8WXI8 215 aa15.49■□□□□ 0.07
APTX-231ENST00000494973 HOMER2Q9NSB8 354 aa15.49■□□□□ 0.07
APTX-231ENST00000494973 SAGE1Q9NXZ1 904 aa15.49■□□□□ 0.07
APTX-231ENST00000494973 IVNS1ABPQ9Y6Y0 642 aa15.49■□□□□ 0.07
APTX-231ENST00000494973 BTBD18B2RXH4 712 aa15.48■□□□□ 0.07
APTX-231ENST00000494973 STRNO43815 780 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms