RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 XRCC4Q13426 336 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 MIS18BP1Q6P0N0 1132 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 KLC3Q6P597 504 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 ARHGEF18Q6ZSZ5 1173 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 RIC3Q7Z5B4 369 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 VPS52Q8N1B4 723 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 ACRBPQ8NEB7 543 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 DDX54Q8TDD1 881 aaKnown RBP6.71□□□□□ -1.34
PHC3-214ENST00000494943 CENPTQ96BT3 561 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.71□□□□□ -1.34
PHC3-214ENST00000494943 CNNM2Q9H8M5 875 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 ANKRD26Q9UPS8 1709 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 POGZQ7Z3K3 1410 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 RASSF9O75901 435 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 MMEP08473 750 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 HOXB7P09629 217 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 VHLP40337 213 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 CALCOCO2Q13137 446 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 BLMHQ13867 455 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 SLC9C1Q4G0N8 1177 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 TRPM8Q7Z2W7 1104 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 LRRN4CLQ8ND94 238 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 CNKSR1Q969H4 720 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 ABTB1Q969K4 478 aaPredicted RBP6.71□□□□□ -1.34
PHC3-214ENST00000494943 FAXDC2Q96IV6 333 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 CARD9Q9H257 536 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 TSPYL2Q9H2G4 693 aaPredicted RBP6.71□□□□□ -1.34
PHC3-214ENST00000494943 TMEM60Q9H2L4 133 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 BHMT2Q9H2M3 363 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 MMADHCQ9H3L0 296 aaPredicted RBP6.71□□□□□ -1.34
PHC3-214ENST00000494943 THAP9Q9H5L6 903 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 ZWILCHQ9H900 591 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 EPB41L5Q9HCM4 733 aa6.71□□□□□ -1.34
PHC3-214ENST00000494943 BMP2KQ9NSY1 1161 aaPredicted RBP6.71□□□□□ -1.34
PHC3-214ENST00000494943 MLH3Q9UHC1 1453 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 A0A1W2PQC6 194 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 MYL1P05976 194 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 STX2P32856 288 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 PDE1BQ01064 536 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 IL9RQ01113 521 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 TAF7Q15545 349 aaPredicted RBP6.7□□□□□ -1.34
PHC3-214ENST00000494943 SLC5A9Q2M3M2 681 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 ZNF579Q8NAF0 562 aaKnown RBP6.7□□□□□ -1.34
PHC3-214ENST00000494943 ENGASEQ8NFI3 743 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 RNPC3Q96LT9 517 aaKnown RBP6.7□□□□□ -1.34
PHC3-214ENST00000494943 MAGEF1Q9HAY2 307 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 KCNK9Q9NPC2 374 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 ARL2BPQ9Y2Y0 163 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 AATKQ6ZMQ8 1374 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 RTL9Q8NET4 1388 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 NVLO15381 856 aaKnown RBP6.7□□□□□ -1.34
PHC3-214ENST00000494943 COQ9O75208 318 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 PRPF6O94906 941 aaKnown RBP6.7□□□□□ -1.34
PHC3-214ENST00000494943 FAM200BP0CF97 657 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 CCDC166P0CW27 439 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 HSPA6P17066 643 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 ZBED6P86452 979 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 GUCY1A3Q02108 690 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 PTH1RQ03431 593 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 TBX2Q13207 712 aaPredicted RBP6.7□□□□□ -1.34
PHC3-214ENST00000494943 KBTBD12Q3ZCT8 623 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 USH1GQ495M9 461 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 WASHC2DQ5SRD0 308 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 NELFBQ8WX92 580 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 KAT2BQ92831 832 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 FAM167BQ9BTA0 163 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 MRPL44Q9H9J2 332 aaKnown RBP6.7□□□□□ -1.34
PHC3-214ENST00000494943 COMMD3-BMI1R4GMX3 469 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 WDR17Q8IZU2 1322 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 ZBTB43O43298 467 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 POTEJP0CG39 1038 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 STAT6P42226 847 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 ZBTB16Q05516 673 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 PPP2R5BQ15173 497 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 MEX3CQ5U5Q3 659 aaKnown RBP6.7□□□□□ -1.34
PHC3-214ENST00000494943 KCNV1Q6PIU1 500 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 HS2ST1Q7LGA3 356 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 GALNT15Q8N3T1 639 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 PARD3BQ8TEW8 1205 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 XPO6Q96QU8 1125 aaKnown RBP6.7□□□□□ -1.34
PHC3-214ENST00000494943 RNF41Q9H4P4 317 aaPredicted RBP6.7□□□□□ -1.34
PHC3-214ENST00000494943 CCDC87Q9NVE4 849 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 WDR19Q8NEZ3 1342 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 MARCH6O60337 910 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 SMNDC1O75940 238 aaKnown RBP eCLIP6.7□□□□□ -1.34
PHC3-214ENST00000494943 PARP1P09874 1014 aaKnown RBP6.7□□□□□ -1.34
PHC3-214ENST00000494943 KCNA3P22001 575 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 ZNF662Q6ZS27 426 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 TMEM87BQ96K49 555 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 NEUROD6Q96NK8 337 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 FAM129AQ9BZQ8 928 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 VPS16Q9H269 839 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 UNC45AQ9H3U1 944 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 TMBIM4Q9HC24 238 aa6.7□□□□□ -1.34
PHC3-214ENST00000494943 SCHIP1Q9P0W5 487 aaPredicted RBP6.7□□□□□ -1.34
PHC3-214ENST00000494943 NOVA2Q9UNW9 492 aaKnown RBP6.7□□□□□ -1.34
PHC3-214ENST00000494943 AGTP01019 485 aa6.69□□□□□ -1.34
PHC3-214ENST00000494943 ATP1A3P13637 1013 aa6.69□□□□□ -1.34
PHC3-214ENST00000494943 COPS2P61201 443 aa6.69□□□□□ -1.34
PHC3-214ENST00000494943 TBC1D8BQ0IIM8 1120 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms