RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 SLC38A10Q9HBR0 1119 aa13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 NYAP2Q9P242 653 aa13.94□□□□□ -0.18
CSNK1E-212ENST00000494610 M0R2C6 588 aa13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 RFXAPO00287 272 aa13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 COPB2P35606 906 aa13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 TFF2Q03403 129 aa13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 CASC1Q6TDU7 716 aa13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 EEPD1Q7L9B9 569 aa13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 MICALL1Q8N3F8 863 aa13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 TMEM199Q8N511 208 aa13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 MSL3Q8N5Y2 521 aaKnown RBP13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 DDRGK1Q96HY6 314 aa13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 SCLYQ96I15 445 aa13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 WNT8AQ9H1J5 351 aa13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 ABHD16BQ9H3Z7 469 aa13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 IL23AQ9NPF7 189 aa13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 ARPP21Q9UBL0 812 aaPredicted RBP13.93□□□□□ -0.18
CSNK1E-212ENST00000494610 ATP2A1O14983 1001 aa13.92□□□□□ -0.18
CSNK1E-212ENST00000494610 SMPD1P17405 629 aa13.92□□□□□ -0.18
CSNK1E-212ENST00000494610 SBK1Q52WX2 424 aa13.92□□□□□ -0.18
CSNK1E-212ENST00000494610 ZNF467Q7Z7K2 595 aaPredicted RBP13.92□□□□□ -0.18
CSNK1E-212ENST00000494610 PCSK9Q8NBP7 692 aaKnown RBP13.92□□□□□ -0.18
CSNK1E-212ENST00000494610 SEC62Q99442 399 aaKnown RBP13.92□□□□□ -0.18
CSNK1E-212ENST00000494610 INCENPQ9NQS7 918 aa13.92□□□□□ -0.18
CSNK1E-212ENST00000494610 THEGQ9P2T0 379 aa13.92□□□□□ -0.18
CSNK1E-212ENST00000494610 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
CSNK1E-212ENST00000494610 CTDP1Q9Y5B0 961 aaPredicted RBP13.92□□□□□ -0.18
CSNK1E-212ENST00000494610 ZNF536O15090 1300 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 LRRC37A2A6NM11 1700 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 TMEM232C9JQI7 657 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 DYNC1LI2O43237 492 aaPredicted RBP13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 B4GALT4O60513 344 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 FGBP02675 491 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 TNFAIP2Q03169 654 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 MUM1L1Q5H9M0 696 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 SLFN13Q68D06 897 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 TICAM2Q86XR7 235 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 FAM133AQ8N9E0 248 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 OTUD7AQ8TE49 926 aaPredicted RBP13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 HERVK_113Q902F9 699 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 HIPK3Q9H422 1215 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 CERS4Q9HA82 394 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 A1CFQ9NQ94 594 aaKnown RBP13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 MTMR4Q9NYA4 1195 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 GNEQ9Y223 722 aaKnown RBP13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 LCTP09848 1927 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 SCN5AQ14524 2016 aa13.91□□□□□ -0.18
CSNK1E-212ENST00000494610 MROH7Q68CQ1 1323 aa13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 PRRC2BQ5JSZ5 2229 aaKnown RBP13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 TLR3O15455 904 aaKnown RBP13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 ITGA7Q13683 1181 aa13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 LRRFIP1Q32MZ4 808 aaKnown RBP13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 AKNAD1Q5T1N1 836 aa13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 KRT40Q6A162 431 aa13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 PSRC1Q6PGN9 363 aaPredicted RBP13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 CCDC174Q6PII3 467 aa13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 FBXO16Q8IX29 292 aaPredicted RBP13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 SLC43A3Q8NBI5 491 aa13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 ATXN2LQ8WWM7 1075 aaKnown RBP13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 UHRF1Q96T88 793 aaPredicted RBP13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 NOC4LQ9BVI4 516 aaKnown RBP13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 SPC25Q9HBM1 224 aa13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 RNF146Q9NTX7 359 aa13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 MSRAQ9UJ68 235 aa13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 FEM1BQ9UK73 627 aa13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 MTMR7Q9Y216 660 aa13.9□□□□□ -0.18
CSNK1E-212ENST00000494610 TRIM6-TRIM34B2RNG4 842 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 GPAA1O43292 621 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 NMT2O60551 498 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 CDC45O75419 566 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 ARHGEF15O94989 841 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 APPP05067 770 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 CYP2C9P11712 490 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 BMP3P12645 472 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 ALAS1P13196 640 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 MCCP23508 829 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 TDO2P48775 406 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 KCNQ1P51787 676 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 MRPS5P82675 430 aaKnown RBP13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 FSCN1Q16658 493 aaKnown RBP13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 TAPT1Q6NXT6 567 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 KCTD1Q719H9 257 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 SPRED2Q7Z698 418 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 TLK2Q86UE8 772 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 SKAP1Q86WV1 359 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 ZNF444Q8N0Y2 327 aaPredicted RBP13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 CHST13Q8NET6 341 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 PI4K2BQ8TCG2 481 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 MKL1Q969V6 931 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 SLC28A3Q9HAS3 691 aa13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 TRMT13Q9NUP7 481 aaKnown RBP13.89□□□□□ -0.19
CSNK1E-212ENST00000494610 EPOPA6NHQ4 379 aa13.88□□□□□ -0.19
CSNK1E-212ENST00000494610 HIP1O00291 1037 aa13.88□□□□□ -0.19
CSNK1E-212ENST00000494610 GSPT1P15170 499 aaKnown RBP13.88□□□□□ -0.19
CSNK1E-212ENST00000494610 TTLL4Q14679 1199 aa13.88□□□□□ -0.19
CSNK1E-212ENST00000494610 ZSCAN25Q6NSZ9 544 aa13.88□□□□□ -0.19
CSNK1E-212ENST00000494610 IFNL3Q8IZI9 196 aa13.88□□□□□ -0.19
CSNK1E-212ENST00000494610 EVI5LQ96CN4 794 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms