RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 HERVK_113P62684 666 aa16.17■□□□□ 0.18
UBE3C-207ENST00000494532 BRAPQ7Z569 592 aa16.17■□□□□ 0.18
UBE3C-207ENST00000494532 CUL5Q93034 780 aa16.17■□□□□ 0.18
UBE3C-207ENST00000494532 GLT8D2Q9H1C3 349 aa16.17■□□□□ 0.18
UBE3C-207ENST00000494532 PSTPIP2Q9H939 334 aa16.17■□□□□ 0.18
UBE3C-207ENST00000494532 RIC8AQ9NPQ8 531 aa16.17■□□□□ 0.18
UBE3C-207ENST00000494532 SMCHD1A6NHR9 2005 aa16.16■□□□□ 0.18
UBE3C-207ENST00000494532 U2AF2P26368 475 aaKnown RBP eCLIP16.16■□□□□ 0.183e-6■□□□□ 11.2
UBE3C-207ENST00000494532 MRPL12P52815 198 aaKnown RBP16.16■□□□□ 0.18
UBE3C-207ENST00000494532 GRM1Q13255 1194 aa16.16■□□□□ 0.18
UBE3C-207ENST00000494532 NR5A1Q13285 461 aa16.16■□□□□ 0.18
UBE3C-207ENST00000494532 PLS1Q14651 629 aa16.16■□□□□ 0.18
UBE3C-207ENST00000494532 TMEM132BQ14DG7 1078 aa16.16■□□□□ 0.18
UBE3C-207ENST00000494532 FOXD4L6Q3SYB3 417 aaPredicted RBP16.16■□□□□ 0.18
UBE3C-207ENST00000494532 SNRNP48Q6IEG0 339 aaKnown RBP16.16■□□□□ 0.18
UBE3C-207ENST00000494532 CYP4F22Q6NT55 531 aa16.16■□□□□ 0.18
UBE3C-207ENST00000494532 FOXD4L3Q6VB84 417 aaPredicted RBP16.16■□□□□ 0.18
UBE3C-207ENST00000494532 LBX2Q6XYB7 198 aa16.16■□□□□ 0.18
UBE3C-207ENST00000494532 NOSTRINQ8IVI9 506 aa16.16■□□□□ 0.18
UBE3C-207ENST00000494532 FAM43AQ8N2R8 423 aa16.16■□□□□ 0.18
UBE3C-207ENST00000494532 GTF3C2Q8WUA4 911 aaPredicted RBP16.16■□□□□ 0.18
UBE3C-207ENST00000494532 PAGR1Q9BTK6 254 aa16.16■□□□□ 0.18
UBE3C-207ENST00000494532 RBBP6Q7Z6E9 1792 aaKnown RBP16.15■□□□□ 0.18
UBE3C-207ENST00000494532 RASSF10A6NK89 507 aa16.15■□□□□ 0.18
UBE3C-207ENST00000494532 ATP2A1O14983 1001 aa16.15■□□□□ 0.18
UBE3C-207ENST00000494532 CYP2C8P10632 490 aa16.15■□□□□ 0.18
UBE3C-207ENST00000494532 SREBF2Q12772 1141 aa16.15■□□□□ 0.18
UBE3C-207ENST00000494532 REXO1Q8N1G1 1221 aaKnown RBP16.15■□□□□ 0.18
UBE3C-207ENST00000494532 RASGRP4Q8TDF6 673 aa16.15■□□□□ 0.18
UBE3C-207ENST00000494532 SMCR8Q8TEV9 937 aaPredicted RBP16.15■□□□□ 0.18
UBE3C-207ENST00000494532 TNFRSF25Q93038 417 aa16.15■□□□□ 0.18
UBE3C-207ENST00000494532 PARK7Q99497 189 aaKnown RBP16.15■□□□□ 0.18
UBE3C-207ENST00000494532 PTPN18Q99952 460 aa16.15■□□□□ 0.18
UBE3C-207ENST00000494532 TEX13BQ9BXU2 312 aa16.15■□□□□ 0.18
UBE3C-207ENST00000494532 HOMER2Q9NSB8 354 aa16.15■□□□□ 0.18
UBE3C-207ENST00000494532 ZNF214Q9UL59 606 aaPredicted RBP16.15■□□□□ 0.18
UBE3C-207ENST00000494532 CCDC194A0A1B0GVG4 234 aa16.14■□□□□ 0.17
UBE3C-207ENST00000494532 M0R2N6 131 aa16.14■□□□□ 0.17
UBE3C-207ENST00000494532 ADAMTS3O15072 1205 aa16.14■□□□□ 0.17
UBE3C-207ENST00000494532 STAT3P40763 770 aa16.14■□□□□ 0.17
UBE3C-207ENST00000494532 INHBEP58166 350 aa16.14■□□□□ 0.17
UBE3C-207ENST00000494532 UBE2SQ16763 222 aa16.14■□□□□ 0.17
UBE3C-207ENST00000494532 DEFB115Q30KQ5 88 aa16.14■□□□□ 0.17
UBE3C-207ENST00000494532 TKFCQ3LXA3 575 aa16.14■□□□□ 0.17
UBE3C-207ENST00000494532 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
UBE3C-207ENST00000494532 ZCCHC17Q9NP64 241 aaKnown RBP16.14■□□□□ 0.17
UBE3C-207ENST00000494532 RNF146Q9NTX7 359 aa16.14■□□□□ 0.17
UBE3C-207ENST00000494532 BTBD7Q9P203 1132 aa16.14■□□□□ 0.17
UBE3C-207ENST00000494532 BIN2Q9UBW5 565 aaPredicted RBP16.14■□□□□ 0.17
UBE3C-207ENST00000494532 PCDHA6Q9UN73 950 aa16.14■□□□□ 0.17
UBE3C-207ENST00000494532 PCDHA8Q9Y5H6 950 aa16.14■□□□□ 0.17
UBE3C-207ENST00000494532 OPLAHO14841 1288 aa16.13■□□□□ 0.17
UBE3C-207ENST00000494532 CNMDO75829 334 aa16.13■□□□□ 0.17
UBE3C-207ENST00000494532 JAKMIP3Q5VZ66 844 aa16.13■□□□□ 0.17
UBE3C-207ENST00000494532 POTEEQ6S8J3 1075 aa16.13■□□□□ 0.17
UBE3C-207ENST00000494532 PIK3AP1Q6ZUJ8 805 aa16.13■□□□□ 0.17
UBE3C-207ENST00000494532 KRT25Q7Z3Z0 450 aa16.13■□□□□ 0.17
UBE3C-207ENST00000494532 MCF2L2Q86YR7 1114 aa16.13■□□□□ 0.17
UBE3C-207ENST00000494532 CAPNS2Q96L46 248 aa16.13■□□□□ 0.17
UBE3C-207ENST00000494532 TRERF1Q96PN7 1200 aa16.13■□□□□ 0.17
UBE3C-207ENST00000494532 GBP4Q96PP9 640 aa16.13■□□□□ 0.17
UBE3C-207ENST00000494532 SPATC1LQ9H0A9 340 aa16.13■□□□□ 0.17
UBE3C-207ENST00000494532 TMEM260Q9NX78 707 aa16.13■□□□□ 0.17
UBE3C-207ENST00000494532 RABGAP1Q9Y3P9 1069 aa16.13■□□□□ 0.17
UBE3C-207ENST00000494532 FAM205CA6NFA0 338 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 GCOM1H8Y6P7 765 aaPredicted RBP16.12■□□□□ 0.17
UBE3C-207ENST00000494532 IGF2BP3O00425 579 aaKnown RBP eCLIP16.12■□□□□ 0.17
UBE3C-207ENST00000494532 NFIBO00712 420 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 PEX10O60683 326 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 BAG4O95429 457 aaKnown RBP16.12■□□□□ 0.17
UBE3C-207ENST00000494532 CFBP00751 764 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 POLR2MP0CAP2 368 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 NCLP19338 710 aaKnown RBP16.12■□□□□ 0.17
UBE3C-207ENST00000494532 GCLCP48506 637 aaPredicted RBP16.12■□□□□ 0.17
UBE3C-207ENST00000494532 DNM1Q05193 864 aaKnown RBP16.12■□□□□ 0.17
UBE3C-207ENST00000494532 NOGQ13253 232 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 MUM1L1Q5H9M0 696 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 MYSM1Q5VVJ2 828 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 USP17L6PQ6QN14 398 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 IFNL1Q8IU54 200 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 RIOX2Q8IUF8 465 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 TEX2Q8IWB9 1127 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 CLEC4DQ8WXI8 215 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 ZNF396Q96N95 335 aaPredicted RBP16.12■□□□□ 0.17
UBE3C-207ENST00000494532 RBPJLQ9UBG7 517 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 NOL7Q9UMY1 257 aaKnown RBP16.12■□□□□ 0.17
UBE3C-207ENST00000494532 RIPK3Q9Y572 518 aa16.12■□□□□ 0.17
UBE3C-207ENST00000494532 PIK3CDO00329 1044 aa16.11■□□□□ 0.17
UBE3C-207ENST00000494532 MEIS2O14770 477 aa16.11■□□□□ 0.17
UBE3C-207ENST00000494532 COPB2P35606 906 aa16.11■□□□□ 0.17
UBE3C-207ENST00000494532 CLK2P49760 499 aaKnown RBP16.11■□□□□ 0.17
UBE3C-207ENST00000494532 AP3B2Q13367 1082 aa16.11■□□□□ 0.17
UBE3C-207ENST00000494532 NONOQ15233 471 aaKnown RBP eCLIP16.11■□□□□ 0.17
UBE3C-207ENST00000494532 NOM1Q5C9Z4 860 aaKnown RBP16.11■□□□□ 0.17
UBE3C-207ENST00000494532 EARS2Q5JPH6 523 aaKnown RBP16.11■□□□□ 0.17
UBE3C-207ENST00000494532 MCTP2Q6DN12 878 aa16.11■□□□□ 0.17
UBE3C-207ENST00000494532 CHST13Q8NET6 341 aa16.11■□□□□ 0.17
UBE3C-207ENST00000494532 CHAMP1Q96JM3 812 aa16.11■□□□□ 0.17
UBE3C-207ENST00000494532 ZIC5Q96T25 663 aa16.11■□□□□ 0.17
UBE3C-207ENST00000494532 ACAD9Q9H845 621 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms