RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 EEPD1Q7L9B9 569 aa14.98□□□□□ -0.01
SKA1-205ENST00000494518 FAM160B2Q86V87 743 aa14.98□□□□□ -0.01
SKA1-205ENST00000494518 FAM133AQ8N9E0 248 aa14.98□□□□□ -0.01
SKA1-205ENST00000494518 PCSK9Q8NBP7 692 aaKnown RBP14.98□□□□□ -0.01
SKA1-205ENST00000494518 CHURC1Q8WUH1 139 aa14.98□□□□□ -0.01
SKA1-205ENST00000494518 GMCL1Q96IK5 515 aa14.98□□□□□ -0.01
SKA1-205ENST00000494518 TOX2Q96NM4 488 aa14.98□□□□□ -0.01
SKA1-205ENST00000494518 PURBQ96QR8 312 aaKnown RBP14.98□□□□□ -0.01
SKA1-205ENST00000494518 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.98□□□□□ -0.012e-6■■■■□ 23.3
SKA1-205ENST00000494518 TOMM22Q9NS69 142 aa14.98□□□□□ -0.01
SKA1-205ENST00000494518 PRR12Q9ULL5 1215 aa14.98□□□□□ -0.01
SKA1-205ENST00000494518 SYNPO2Q9UMS6 1093 aa14.98□□□□□ -0.01
SKA1-205ENST00000494518 ELP1O95163 1332 aa14.97□□□□□ -0.01
SKA1-205ENST00000494518 SALL3Q9BXA9 1300 aa14.97□□□□□ -0.01
SKA1-205ENST00000494518 A0A0U1RQG5 324 aaPredicted RBP14.97□□□□□ -0.01
SKA1-205ENST00000494518 GRXCR1A8MXD5 290 aa14.97□□□□□ -0.01
SKA1-205ENST00000494518 CTAGE5O15320 804 aa14.97□□□□□ -0.01
SKA1-205ENST00000494518 ACRP10323 421 aa14.97□□□□□ -0.01
SKA1-205ENST00000494518 TNFAIP2Q03169 654 aa14.97□□□□□ -0.01
SKA1-205ENST00000494518 RRP12Q5JTH9 1297 aaKnown RBP14.97□□□□□ -0.01
SKA1-205ENST00000494518 TMEM63BQ5T3F8 832 aa14.97□□□□□ -0.01
SKA1-205ENST00000494518 CXCL17Q6UXB2 119 aa14.97□□□□□ -0.01
SKA1-205ENST00000494518 NSMFQ6X4W1 530 aa14.97□□□□□ -0.01
SKA1-205ENST00000494518 FBXO16Q8IX29 292 aaPredicted RBP14.97□□□□□ -0.01
SKA1-205ENST00000494518 PDGFCQ9NRA1 345 aa14.97□□□□□ -0.01
SKA1-205ENST00000494518 MROH7Q68CQ1 1323 aa14.96□□□□□ -0.01
SKA1-205ENST00000494518 ARVCFO00192 962 aa14.96□□□□□ -0.01
SKA1-205ENST00000494518 FDX1P10109 184 aa14.96□□□□□ -0.01
SKA1-205ENST00000494518 CSF2RAP15509 400 aa14.96□□□□□ -0.01
SKA1-205ENST00000494518 DNAJB2P25686 324 aa14.96□□□□□ -0.01
SKA1-205ENST00000494518 SLC16A2P36021 539 aa14.96□□□□□ -0.01
SKA1-205ENST00000494518 CDK7P50613 346 aa14.96□□□□□ -0.01
SKA1-205ENST00000494518 TTBK2Q6IQ55 1244 aa14.96□□□□□ -0.01
SKA1-205ENST00000494518 RCSD1Q6JBY9 416 aa14.96□□□□□ -0.01
SKA1-205ENST00000494518 MFSD5Q6N075 450 aa14.96□□□□□ -0.01
SKA1-205ENST00000494518 TLK2Q86UE8 772 aa14.96□□□□□ -0.01
SKA1-205ENST00000494518 CRBNQ96SW2 442 aa14.96□□□□□ -0.01
SKA1-205ENST00000494518 ZBTB47Q9UFB7 747 aaPredicted RBP14.96□□□□□ -0.01
SKA1-205ENST00000494518 CCPG1Q9ULG6 757 aa14.96□□□□□ -0.01
SKA1-205ENST00000494518 FRMPD2Q68DX3 1309 aaPredicted RBP14.95□□□□□ -0.02
SKA1-205ENST00000494518 A0A0D9SFI3 127 aa14.95□□□□□ -0.02
SKA1-205ENST00000494518 SMPD1P17405 629 aa14.95□□□□□ -0.02
SKA1-205ENST00000494518 CYP2C18P33260 490 aa14.95□□□□□ -0.02
SKA1-205ENST00000494518 PBX2P40425 430 aa14.95□□□□□ -0.02
SKA1-205ENST00000494518 RRP1P56182 461 aaKnown RBP14.95□□□□□ -0.02
SKA1-205ENST00000494518 PPIGQ13427 754 aaKnown RBP eCLIP14.95□□□□□ -0.02
SKA1-205ENST00000494518 GRIN2CQ14957 1233 aa14.95□□□□□ -0.02
SKA1-205ENST00000494518 TKFCQ3LXA3 575 aa14.95□□□□□ -0.02
SKA1-205ENST00000494518 C16orf59Q7L2K0 433 aa14.95□□□□□ -0.02
SKA1-205ENST00000494518 FAM126BQ8IXS8 530 aa14.95□□□□□ -0.02
SKA1-205ENST00000494518 FAM227BQ96M60 508 aa14.95□□□□□ -0.02
SKA1-205ENST00000494518 MYH6P13533 1939 aa14.95□□□□□ -0.02
SKA1-205ENST00000494518 SCN5AQ14524 2016 aa14.95□□□□□ -0.02
SKA1-205ENST00000494518 CHD9Q3L8U1 2897 aa14.95□□□□□ -0.02
SKA1-205ENST00000494518 UMODL1Q5DID0 1318 aa14.94□□□□□ -0.02
SKA1-205ENST00000494518 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.94□□□□□ -0.02
SKA1-205ENST00000494518 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.94□□□□□ -0.02
SKA1-205ENST00000494518 ASB14A6NK59 587 aa14.94□□□□□ -0.02
SKA1-205ENST00000494518 TLR3O15455 904 aaKnown RBP14.94□□□□□ -0.02
SKA1-205ENST00000494518 DYNC1LI2O43237 492 aaPredicted RBP14.94□□□□□ -0.02
SKA1-205ENST00000494518 HAND2P61296 217 aa14.94□□□□□ -0.02
SKA1-205ENST00000494518 FSCN1Q16658 493 aaKnown RBP14.94□□□□□ -0.02
SKA1-205ENST00000494518 TMEM240Q5SV17 173 aa14.94□□□□□ -0.02
SKA1-205ENST00000494518 AP5M1Q9H0R1 490 aa14.94□□□□□ -0.02
SKA1-205ENST00000494518 GPCPD1Q9NPB8 672 aa14.94□□□□□ -0.02
SKA1-205ENST00000494518 CYP39A1Q9NYL5 469 aa14.94□□□□□ -0.02
SKA1-205ENST00000494518 GNEQ9Y223 722 aaKnown RBP14.94□□□□□ -0.02
SKA1-205ENST00000494518 PLA2G6O60733 806 aa14.93□□□□□ -0.02
SKA1-205ENST00000494518 PSMC6P62333 389 aa14.93□□□□□ -0.02
SKA1-205ENST00000494518 PPP4R3BQ5MIZ7 849 aa14.93□□□□□ -0.02
SKA1-205ENST00000494518 ZNF365Q70YC5 407 aa14.93□□□□□ -0.02
SKA1-205ENST00000494518 DCAF4Q8WV16 495 aa14.93□□□□□ -0.02
SKA1-205ENST00000494518 TIFAQ96CG3 184 aa14.93□□□□□ -0.02
SKA1-205ENST00000494518 EVI5LQ96CN4 794 aa14.93□□□□□ -0.02
SKA1-205ENST00000494518 NFIBO00712 420 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 ORC4O43929 436 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 FGAP02671 866 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 ICAM1P05362 532 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 PDE1AP54750 535 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 NMIQ13287 307 aaPredicted RBP14.92□□□□□ -0.02
SKA1-205ENST00000494518 BAATQ14032 418 aaPredicted RBP14.92□□□□□ -0.02
SKA1-205ENST00000494518 SYDE2Q5VT97 1194 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 TAPT1Q6NXT6 567 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 ZNF589Q86UQ0 364 aaPredicted RBP14.92□□□□□ -0.02
SKA1-205ENST00000494518 TMEM199Q8N511 208 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 USP38Q8NB14 1042 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 TMEM47Q9BQJ4 181 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 TRPV6Q9H1D0 765 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 RANBP17Q9H2T7 1088 aaKnown RBP14.92□□□□□ -0.02
SKA1-205ENST00000494518 ZNF576Q9H609 170 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 ANAPC4Q9UJX5 808 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 LAMA4Q16363 1823 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 GRIN2DO15399 1336 aa14.92□□□□□ -0.02
SKA1-205ENST00000494518 TMEM265A0A087WTH1 108 aa14.91□□□□□ -0.02
SKA1-205ENST00000494518 PTPDC1A2A3K4 754 aa14.91□□□□□ -0.02
SKA1-205ENST00000494518 CD4P01730 458 aa14.91□□□□□ -0.02
SKA1-205ENST00000494518 CCL23P55773 120 aa14.91□□□□□ -0.02
SKA1-205ENST00000494518 ITGA7Q13683 1181 aa14.91□□□□□ -0.02
SKA1-205ENST00000494518 SLC30A10Q6XR72 485 aa14.91□□□□□ -0.02
SKA1-205ENST00000494518 KIAA1211Q6ZU35 1233 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms