RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 GLIS3Q8NEA6 775 aa13.97□□□□□ -0.17
PHF3-205ENST00000494284 ANKS1AQ92625 1134 aa13.97□□□□□ -0.17
PHF3-205ENST00000494284 CRAMP1Q96RY5 1269 aa13.97□□□□□ -0.17
PHF3-205ENST00000494284 HINFPQ9BQA5 517 aa13.97□□□□□ -0.17
PHF3-205ENST00000494284 CALML3P27482 149 aa13.97□□□□□ -0.17
PHF3-205ENST00000494284 UBA7P41226 1012 aa13.97□□□□□ -0.17
PHF3-205ENST00000494284 KLK7P49862 253 aa13.97□□□□□ -0.17
PHF3-205ENST00000494284 SYCP1Q15431 976 aa13.97□□□□□ -0.17
PHF3-205ENST00000494284 ZNF569Q5MCW4 686 aa13.97□□□□□ -0.17
PHF3-205ENST00000494284 C15orf52Q6ZUT6 534 aaKnown RBP13.97□□□□□ -0.17
PHF3-205ENST00000494284 ZSCAN29Q8IWY8 852 aaPredicted RBP13.97□□□□□ -0.17
PHF3-205ENST00000494284 KRT222Q8N1A0 295 aa13.97□□□□□ -0.17
PHF3-205ENST00000494284 RRP36Q96EU6 259 aaKnown RBP13.97□□□□□ -0.17
PHF3-205ENST00000494284 SLF1Q9BQI6 1058 aa13.97□□□□□ -0.17
PHF3-205ENST00000494284 POLD4Q9HCU8 107 aa13.97□□□□□ -0.17
PHF3-205ENST00000494284 TNNI2P48788 182 aa13.96□□□□□ -0.17
PHF3-205ENST00000494284 CCDC96Q2M329 555 aa13.96□□□□□ -0.17
PHF3-205ENST00000494284 MYH8P13535 1937 aa13.96□□□□□ -0.17
PHF3-205ENST00000494284 ERCC5P28715 1186 aaPredicted RBP13.96□□□□□ -0.18
PHF3-205ENST00000494284 PPP2R3AQ06190 1150 aa13.96□□□□□ -0.18
PHF3-205ENST00000494284 AOC3Q16853 763 aa13.96□□□□□ -0.18
PHF3-205ENST00000494284 CCDC178Q5BJE1 867 aa13.96□□□□□ -0.18
PHF3-205ENST00000494284 DYMQ7RTS9 669 aa13.96□□□□□ -0.18
PHF3-205ENST00000494284 ZFP91Q96JP5 570 aaPredicted RBP13.96□□□□□ -0.18
PHF3-205ENST00000494284 CHP1Q99653 195 aa13.96□□□□□ -0.18
PHF3-205ENST00000494284 ZMYND12Q9H0C1 365 aa13.96□□□□□ -0.18
PHF3-205ENST00000494284 KCND1Q9NSA2 647 aa13.96□□□□□ -0.18
PHF3-205ENST00000494284 TCP11L1Q9NUJ3 509 aa13.96□□□□□ -0.18
PHF3-205ENST00000494284 SEC63Q9UGP8 760 aaKnown RBP13.96□□□□□ -0.18
PHF3-205ENST00000494284 SERPINB13Q9UIV8 391 aa13.96□□□□□ -0.18
PHF3-205ENST00000494284 SCN9AQ15858 1988 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 USP17L15C9J2P7 530 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 USP17L13C9JLJ4 530 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 USP17L11C9JVI0 530 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 USP17L18D6R9N7 530 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 USP17L22D6RA61 530 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 USP17L17D6RBQ6 530 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 USP17L19D6RCP7 530 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 USP17L20D6RJB6 530 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 GYS2P54840 703 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 UBXN1Q04323 297 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 GABPAQ06546 454 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 RAD51AP2Q09MP3 1159 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 USP17L24Q0WX57 530 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 USP17L6PQ6QN14 398 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 ADGRF4Q8IZF3 695 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 TRIML1Q8N9V2 468 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 GSDMAQ96QA5 445 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 MMTAG2Q9BU76 263 aaKnown RBP13.95□□□□□ -0.18
PHF3-205ENST00000494284 PHLPP2Q6ZVD8 1323 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 SMCHD1A6NHR9 2005 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 TADA3O75528 432 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 CCDC175P0C221 793 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 FILIP1LQ4L180 1135 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 CDKAL1Q5VV42 579 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 SH3BP5LQ7L8J4 393 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 IRF2BP1Q8IU81 584 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 JMJD4Q9H9V9 463 aa13.95□□□□□ -0.18
PHF3-205ENST00000494284 MORC2Q9Y6X9 1032 aaPredicted RBP13.95□□□□□ -0.18
PHF3-205ENST00000494284 KCNJ18B7U540 433 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
PHF3-205ENST00000494284 STK4Q13043 487 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 PAK1Q13153 545 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 KCNJ12Q14500 433 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 KCNK18Q7Z418 384 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 CDAN1Q8IWY9 1227 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 SPICE1Q8N0Z3 855 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 ADGRG1Q9Y653 693 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 COL11A2P13942 1736 aaPredicted RBP13.94□□□□□ -0.18
PHF3-205ENST00000494284 KLRG2A4D1S0 409 aaPredicted RBP13.94□□□□□ -0.18
PHF3-205ENST00000494284 ENC1O14682 589 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 GTPBP6O43824 516 aaPredicted RBP13.94□□□□□ -0.18
PHF3-205ENST00000494284 KLRC4O43908 158 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 CRKP46108 304 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 ERVK-24P63145 666 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 NONOQ15233 471 aaKnown RBP eCLIP13.94□□□□□ -0.18
PHF3-205ENST00000494284 ECM1Q16610 540 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 CABP7Q86V35 215 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 REXO1Q8N1G1 1221 aaKnown RBP13.94□□□□□ -0.18
PHF3-205ENST00000494284 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 COA1Q9GZY4 146 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 FHOD1Q9Y613 1164 aa13.94□□□□□ -0.18
PHF3-205ENST00000494284 CCP110O43303 1012 aa13.93□□□□□ -0.18
PHF3-205ENST00000494284 MFAP3LO75121 409 aa13.93□□□□□ -0.18
PHF3-205ENST00000494284 H2AFXP16104 143 aaPredicted RBP13.93□□□□□ -0.18
PHF3-205ENST00000494284 TRAPPC10P48553 1259 aa13.93□□□□□ -0.18
PHF3-205ENST00000494284 SOGA3Q5TF21 947 aa13.93□□□□□ -0.18
PHF3-205ENST00000494284 TMCO3Q6UWJ1 677 aa13.93□□□□□ -0.18
PHF3-205ENST00000494284 C2CD5Q86YS7 1000 aa13.93□□□□□ -0.18
PHF3-205ENST00000494284 KIFC2Q96AC6 838 aa13.93□□□□□ -0.18
PHF3-205ENST00000494284 SPZ1Q9BXG8 430 aa13.93□□□□□ -0.18
PHF3-205ENST00000494284 TDRD3Q9H7E2 651 aaKnown RBP13.93□□□□□ -0.18
PHF3-205ENST00000494284 SLC39A2Q9NP94 309 aa13.93□□□□□ -0.18
PHF3-205ENST00000494284 LTBP1Q14766 1721 aa13.93□□□□□ -0.18
PHF3-205ENST00000494284 RHOXF2BP0C7M4 288 aa13.93□□□□□ -0.18
PHF3-205ENST00000494284 PNMA6AP0CW24 399 aaPredicted RBP13.93□□□□□ -0.18
PHF3-205ENST00000494284 KRT9P35527 623 aa13.93□□□□□ -0.18
PHF3-205ENST00000494284 LONP1P36776 959 aaKnown RBP13.93□□□□□ -0.18
PHF3-205ENST00000494284 GNAQP50148 359 aa13.93□□□□□ -0.18
PHF3-205ENST00000494284 RRP1BQ14684 758 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms