RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 TBX21Q9UL17 535 aa28.21■■■□□ 2.11
TTC3-224ENST00000494243 DLL1O00548 723 aa28.2■■■□□ 2.1
TTC3-224ENST00000494243 ICAM1P05362 532 aa28.2■■■□□ 2.1
TTC3-224ENST00000494243 TOP1P11387 765 aaKnown RBP28.2■■■□□ 2.1
TTC3-224ENST00000494243 SLC16A2P36021 539 aa28.2■■■□□ 2.1
TTC3-224ENST00000494243 TNFAIP2Q03169 654 aa28.2■■■□□ 2.1
TTC3-224ENST00000494243 CCDC96Q2M329 555 aa28.2■■■□□ 2.1
TTC3-224ENST00000494243 ZNF697Q5TEC3 545 aa28.2■■■□□ 2.1
TTC3-224ENST00000494243 RANBP17Q9H2T7 1088 aaKnown RBP28.2■■■□□ 2.1
TTC3-224ENST00000494243 CCPG1Q9ULG6 757 aa28.2■■■□□ 2.1
TTC3-224ENST00000494243 FPGSQ05932 587 aa28.19■■■□□ 2.1
TTC3-224ENST00000494243 AAMPQ13685 434 aa28.19■■■□□ 2.1
TTC3-224ENST00000494243 PURBQ96QR8 312 aaKnown RBP28.19■■■□□ 2.1
TTC3-224ENST00000494243 GNEQ9Y223 722 aaKnown RBP28.19■■■□□ 2.1
TTC3-224ENST00000494243 CCDC171Q6TFL3 1326 aa28.18■■■□□ 2.1
TTC3-224ENST00000494243 TRIM6-TRIM34B2RNG4 842 aa28.18■■■□□ 2.1
TTC3-224ENST00000494243 ARVCFO00192 962 aa28.18■■■□□ 2.1
TTC3-224ENST00000494243 TIMP1P01033 207 aa28.18■■■□□ 2.1
TTC3-224ENST00000494243 HAND2P61296 217 aa28.18■■■□□ 2.1
TTC3-224ENST00000494243 BEX3Q00994 111 aa28.18■■■□□ 2.1
TTC3-224ENST00000494243 SEMA6BQ9H3T3 888 aa28.18■■■□□ 2.1
TTC3-224ENST00000494243 A0A0U1RQG5 324 aaPredicted RBP28.17■■■□□ 2.1
TTC3-224ENST00000494243 PTGS1P23219 599 aa28.17■■■□□ 2.1
TTC3-224ENST00000494243 SYDE2Q5VT97 1194 aa28.17■■■□□ 2.1
TTC3-224ENST00000494243 B4GALNT3Q6L9W6 998 aa28.17■■■□□ 2.1
TTC3-224ENST00000494243 TAPT1Q6NXT6 567 aa28.17■■■□□ 2.1
TTC3-224ENST00000494243 RILPL2Q969X0 211 aa28.17■■■□□ 2.1
TTC3-224ENST00000494243 VTI1AQ96AJ9 217 aa28.17■■■□□ 2.1
TTC3-224ENST00000494243 RNPC3Q96LT9 517 aaKnown RBP28.17■■■□□ 2.1
TTC3-224ENST00000494243 PDGFCQ9NRA1 345 aa28.17■■■□□ 2.1
TTC3-224ENST00000494243 LRRC37A2A6NM11 1700 aa28.17■■■□□ 2.1
TTC3-224ENST00000494243 MROH7Q68CQ1 1323 aa28.17■■■□□ 2.1
TTC3-224ENST00000494243 FRMPD2Q68DX3 1309 aaPredicted RBP28.17■■■□□ 2.1
TTC3-224ENST00000494243 LCTP09848 1927 aa28.16■■■□□ 2.1
TTC3-224ENST00000494243 IGHDP01880 384 aa28.16■■■□□ 2.1
TTC3-224ENST00000494243 SMPD1P17405 629 aa28.16■■■□□ 2.1
TTC3-224ENST00000494243 NSMFQ6X4W1 530 aa28.16■■■□□ 2.1
TTC3-224ENST00000494243 PLEKHM2Q8IWE5 1019 aa28.16■■■□□ 2.1
TTC3-224ENST00000494243 MORC4Q8TE76 937 aa28.16■■■□□ 2.1
TTC3-224ENST00000494243 TTYH1Q9H313 450 aaPredicted RBP28.16■■■□□ 2.1
TTC3-224ENST00000494243 RWDD1Q9H446 243 aaPredicted RBP28.16■■■□□ 2.1
TTC3-224ENST00000494243 GPCPD1Q9NPB8 672 aa28.16■■■□□ 2.1
TTC3-224ENST00000494243 PDHBP11177 359 aa28.15■■■□□ 2.1
TTC3-224ENST00000494243 SDSP20132 328 aa28.15■■■□□ 2.1
TTC3-224ENST00000494243 AKNAD1Q5T1N1 836 aa28.15■■■□□ 2.1
TTC3-224ENST00000494243 TMEM63BQ5T3F8 832 aa28.15■■■□□ 2.1
TTC3-224ENST00000494243 NOL8Q76FK4 1167 aaKnown RBP28.15■■■□□ 2.1
TTC3-224ENST00000494243 TBC1D10CQ8IV04 446 aa28.15■■■□□ 2.1
TTC3-224ENST00000494243 FAM126BQ8IXS8 530 aa28.15■■■□□ 2.1
TTC3-224ENST00000494243 CDX2Q99626 313 aaPredicted RBP28.15■■■□□ 2.1
TTC3-224ENST00000494243 OSBPL3Q9H4L5 887 aa28.15■■■□□ 2.1
TTC3-224ENST00000494243 BAATQ14032 418 aaPredicted RBP28.14■■■□□ 2.1
TTC3-224ENST00000494243 IQSEC1Q6DN90 963 aa28.14■■■□□ 2.1
TTC3-224ENST00000494243 MFSD5Q6N075 450 aa28.14■■■□□ 2.1
TTC3-224ENST00000494243 MFSD6Q6ZSS7 791 aa28.14■■■□□ 2.1
TTC3-224ENST00000494243 EEPD1Q7L9B9 569 aa28.14■■■□□ 2.1
TTC3-224ENST00000494243 TLK2Q86UE8 772 aa28.14■■■□□ 2.1
TTC3-224ENST00000494243 CHD1LQ86WJ1 897 aa28.14■■■□□ 2.1
TTC3-224ENST00000494243 TTC14Q96N46 770 aa28.14■■■□□ 2.1
TTC3-224ENST00000494243 NFIBO00712 420 aa28.13■■■□□ 2.09
TTC3-224ENST00000494243 PCP11498 1178 aaKnown RBP28.13■■■□□ 2.09
TTC3-224ENST00000494243 NUCB1Q02818 461 aa28.13■■■□□ 2.09
TTC3-224ENST00000494243 CXCL17Q6UXB2 119 aa28.13■■■□□ 2.09
TTC3-224ENST00000494243 C16orf59Q7L2K0 433 aa28.13■■■□□ 2.09
TTC3-224ENST00000494243 FBXO16Q8IX29 292 aaPredicted RBP28.13■■■□□ 2.09
TTC3-224ENST00000494243 SLC43A3Q8NBI5 491 aa28.13■■■□□ 2.09
TTC3-224ENST00000494243 DYNC1LI2O43237 492 aaPredicted RBP28.12■■■□□ 2.09
TTC3-224ENST00000494243 CD4P01730 458 aa28.12■■■□□ 2.09
TTC3-224ENST00000494243 SNHG28P0DPA3 235 aa28.12■■■□□ 2.09
TTC3-224ENST00000494243 ZNF543Q08ER8 600 aa28.12■■■□□ 2.09
TTC3-224ENST00000494243 FSCN1Q16658 493 aaKnown RBP28.12■■■□□ 2.09
TTC3-224ENST00000494243 CLEC4DQ8WXI8 215 aa28.11■■■□□ 2.09
TTC3-224ENST00000494243 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.11■■■□□ 2.092e-19■□□□□ 11.3
TTC3-224ENST00000494243 AP5M1Q9H0R1 490 aa28.11■■■□□ 2.09
TTC3-224ENST00000494243 VTA1Q9NP79 307 aa28.11■■■□□ 2.09
TTC3-224ENST00000494243 Q9Y3F1 56 aa28.11■■■□□ 2.09
TTC3-224ENST00000494243 GRIN2DO15399 1336 aa28.11■■■□□ 2.09
TTC3-224ENST00000494243 MFAP1P55081 439 aaKnown RBP28.1■■■□□ 2.09
TTC3-224ENST00000494243 YTHDC1Q96MU7 727 aaKnown RBP28.1■■■□□ 2.09
TTC3-224ENST00000494243 NEDD4P46934 1319 aa28.1■■■□□ 2.09
TTC3-224ENST00000494243 CABYRO75952 493 aa28.09■■■□□ 2.09
TTC3-224ENST00000494243 CSF2RAP15509 400 aa28.09■■■□□ 2.09
TTC3-224ENST00000494243 ALDH5A1P51649 535 aaPredicted RBP28.09■■■□□ 2.09
TTC3-224ENST00000494243 KIAA1211Q6ZU35 1233 aa28.09■■■□□ 2.09
TTC3-224ENST00000494243 EXOC6Q8TAG9 804 aa28.09■■■□□ 2.09
TTC3-224ENST00000494243 RNF41Q9H4P4 317 aaPredicted RBP28.09■■■□□ 2.09
TTC3-224ENST00000494243 ADD3Q9UEY8 706 aaKnown RBP28.09■■■□□ 2.09
TTC3-224ENST00000494243 A0A0C4DFX4 3053 aa28.09■■■□□ 2.09
TTC3-224ENST00000494243 TLR3O15455 904 aaKnown RBP28.08■■■□□ 2.09
TTC3-224ENST00000494243 ITGA7Q13683 1181 aa28.08■■■□□ 2.09
TTC3-224ENST00000494243 TMEM240Q5SV17 173 aa28.08■■■□□ 2.09
TTC3-224ENST00000494243 ESR2Q92731 530 aa28.08■■■□□ 2.09
TTC3-224ENST00000494243 ZKSCAN3Q9BRR0 538 aa28.08■■■□□ 2.09
TTC3-224ENST00000494243 PPP1R12CQ9BZL4 782 aa28.08■■■□□ 2.09
TTC3-224ENST00000494243 LOC102724159A0A0B4J2E5 919 aa28.07■■■□□ 2.08
TTC3-224ENST00000494243 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.07■■■□□ 2.08
TTC3-224ENST00000494243 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.07■■■□□ 2.08
TTC3-224ENST00000494243 PTPDC1A2A3K4 754 aa28.07■■■□□ 2.08
TTC3-224ENST00000494243 PPIGQ13427 754 aaKnown RBP eCLIP28.07■■■□□ 2.087e-7■□□□□ 10
TTC3-224ENST00000494243 PWP2Q15269 919 aaKnown RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms