RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 KLHL10Q6JEL2 608 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 TMC4Q7Z404 712 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 OR8K1Q8NGG5 319 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 NELFBQ8WX92 580 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 EXOC4Q96A65 974 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 EPSTI1Q96J88 318 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 UBXN6Q9BZV1 441 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 MED4Q9NPJ6 270 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 ZNF446Q9NWS9 450 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
RFC4-214ENST00000494047 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.89□□□□□ -0.35
RFC4-214ENST00000494047 LUC7L2Q9Y383 392 aaKnown RBP12.89□□□□□ -0.35
RFC4-214ENST00000494047 TACC3Q9Y6A5 838 aa12.89□□□□□ -0.35
RFC4-214ENST00000494047 XDHP47989 1333 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 TARSL2A2RTX5 802 aaKnown RBP12.88□□□□□ -0.35
RFC4-214ENST00000494047 GYPCP04921 128 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 ATP2B1P20020 1258 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 CASP14P31944 242 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 CYP2C19P33261 490 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 GYG1P46976 350 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 PPP4CP60510 307 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 MECOMQ03112 1051 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 GRIN1Q05586 938 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 NAA30Q147X3 362 aaPredicted RBP12.88□□□□□ -0.35
RFC4-214ENST00000494047 DPY19L2Q6NUT2 758 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 CNNM4Q6P4Q7 775 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 PIK3AP1Q6ZUJ8 805 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 ADSSL1Q8N142 457 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 CCDC82Q8N4S0 544 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 GOLGA6L1Q8N7Z2 621 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 PNMA1Q8ND90 353 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 RASSF8Q8NHQ8 419 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 WDR24Q96S15 920 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 PSMD1Q99460 953 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 DNAJC7Q99615 494 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 VIPAS39Q9H9C1 493 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 BARHL2Q9NY43 387 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 STK17AQ9UEE5 414 aa12.88□□□□□ -0.35
RFC4-214ENST00000494047 PSMD14O00487 310 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 C1QTNF8P60827 252 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 SEPT2Q15019 361 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 ZNF174Q15697 407 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 HSP90B2PQ58FF3 399 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 FKBP15Q5T1M5 1219 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 PPP1R18Q6NYC8 613 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 WDR93Q6P2C0 686 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 ZNF804AQ7Z570 1209 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 ADGRA1Q86SQ6 560 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 SRBD1Q8N5C6 995 aaKnown RBP12.87□□□□□ -0.35
RFC4-214ENST00000494047 CCDC155Q8N6L0 562 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 GIMAP8Q8ND71 665 aaPredicted RBP12.87□□□□□ -0.35
RFC4-214ENST00000494047 GLT8D2Q9H1C3 349 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 NUCKS1Q9H1E3 243 aaKnown RBP12.87□□□□□ -0.35
RFC4-214ENST00000494047 VPS33BQ9H267 617 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 C6orf50Q9HD87 102 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 LUC7LQ9NQ29 371 aaKnown RBP12.87□□□□□ -0.35
RFC4-214ENST00000494047 KBTBD4Q9NVX7 518 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 CAPN11Q9UMQ6 739 aa12.87□□□□□ -0.35
RFC4-214ENST00000494047 GLTPD2A6NH11 291 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 SOWAHDA6NJG2 315 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 PPEF1O14829 653 aaPredicted RBP12.86□□□□□ -0.35
RFC4-214ENST00000494047 CLSTN1O94985 981 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 LDHBP07195 334 aaKnown RBP12.86□□□□□ -0.35
RFC4-214ENST00000494047 TSPY3P0CV98 308 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 TSPY8P0CW00 308 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 KRT9P35527 623 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 UBXN1Q04323 297 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 ITIH3Q06033 890 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 MUM1L1Q5H9M0 696 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 ZNF569Q5MCW4 686 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 C12orf60Q5U649 245 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 CCDC84Q86UT8 332 aaPredicted RBP12.86□□□□□ -0.35
RFC4-214ENST00000494047 ZNF444Q8N0Y2 327 aaPredicted RBP12.86□□□□□ -0.35
RFC4-214ENST00000494047 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 ZNF526Q8TF50 670 aaPredicted RBP12.86□□□□□ -0.35
RFC4-214ENST00000494047 CALML4Q96GE6 196 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 EDEM3Q9BZQ6 932 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 MKNK2Q9HBH9 465 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 INCENPQ9NQS7 918 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 SEC63Q9UGP8 760 aaKnown RBP12.86□□□□□ -0.35
RFC4-214ENST00000494047 MYO3BQ8WXR4 1341 aa12.86□□□□□ -0.35
RFC4-214ENST00000494047 MYH8P13535 1937 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 A0A087X0B3 334 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 MAP2K7O14733 419 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 NDUFA10O95299 355 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 TBC1D8O95759 1140 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 IVLP07476 585 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
RFC4-214ENST00000494047 MCM7P33993 719 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 SMC1AQ14683 1233 aaKnown RBP12.85□□□□□ -0.35
RFC4-214ENST00000494047 MEA1Q16626 185 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 LONRF2Q1L5Z9 754 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 TMEM266Q2M3C6 531 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 TRIM47Q96LD4 638 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 MED15Q96RN5 788 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 PARD6BQ9BYG5 372 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 ZMYND12Q9H0C1 365 aa12.85□□□□□ -0.35
RFC4-214ENST00000494047 MRPL44Q9H9J2 332 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms