RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ATP11AP98196 1134 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 APBA1Q02410 837 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 ANKRD20A2Q5SQ80 823 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 ANKRD20A1Q5TYW2 823 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 RNF220Q5VTB9 566 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 ANKRD20A3Q5VUR7 823 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 IWS1Q96ST2 819 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 SIL1Q9H173 461 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 MRPL44Q9H9J2 332 aaKnown RBP7.58□□□□□ -1.2
VPS13B-205ENST00000493587 SH2B1Q9NRF2 756 aaPredicted RBP7.58□□□□□ -1.2
VPS13B-205ENST00000493587 STAP2Q9UGK3 403 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 CEP131Q9UPN4 1083 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 ZNF510Q9Y2H8 683 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 THRAP3Q9Y2W1 955 aaKnown RBP7.58□□□□□ -1.2
VPS13B-205ENST00000493587 MGRN1O60291 552 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 HIP1RO75146 1068 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 FAM107AO95990 144 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 RFC5P40937 340 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 PDE1AP54750 535 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 KLC1Q07866 573 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 FAM133BQ5BKY9 247 aaKnown RBP7.58□□□□□ -1.2
VPS13B-205ENST00000493587 CFAP58Q5T655 872 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 GKAP1Q5VSY0 366 aaPredicted RBP7.58□□□□□ -1.2
VPS13B-205ENST00000493587 GRAMD4Q6IC98 578 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 PPFIBP1Q86W92 1011 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 RASEFQ8IZ41 740 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 TEX9Q8N6V9 391 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 CLMNQ96JQ2 1002 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 MPHOSPH6Q99547 160 aaKnown RBP7.58□□□□□ -1.2
VPS13B-205ENST00000493587 SLF1Q9BQI6 1058 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 CYP46A1Q9Y6A2 500 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 LTBP1Q14766 1721 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 TIAM2Q8IVF5 1701 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 HNRNPRO43390 633 aaKnown RBP7.58□□□□□ -1.2
VPS13B-205ENST00000493587 STX10O60499 249 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 ATP2A2P16615 1042 aaKnown RBP7.58□□□□□ -1.2
VPS13B-205ENST00000493587 RPL13P26373 211 aaKnown RBP7.58□□□□□ -1.2
VPS13B-205ENST00000493587 MTF1Q14872 753 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 LONRF3Q496Y0 759 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 ZNF394Q53GI3 561 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 OLFML2BQ68BL8 750 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 NCCRP1Q6ZVX7 275 aaPredicted RBP7.58□□□□□ -1.2
VPS13B-205ENST00000493587 SMC1BQ8NDV3 1235 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.58□□□□□ -1.2
VPS13B-205ENST00000493587 NECTIN2Q92692 538 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 KAZALD1Q96I82 304 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 OSBPL7Q9BZF2 842 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 ZNF180Q9UJW8 692 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 BARX2Q9UMQ3 279 aaPredicted RBP7.58□□□□□ -1.2
VPS13B-205ENST00000493587 STK24Q9Y6E0 443 aa7.58□□□□□ -1.2
VPS13B-205ENST00000493587 TMEM232C9JQI7 657 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 SLC3A2P08195 630 aaKnown RBP7.57□□□□□ -1.2
VPS13B-205ENST00000493587 GNAT2P19087 354 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 LMNB1P20700 586 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 SERPINB4P48594 390 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 PSMD7P51665 324 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 USP14P54578 494 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 BPIFB4P59827 614 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 FAAH2Q6GMR7 532 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 WDR93Q6P2C0 686 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 LARP1Q6PKG0 1096 aaKnown RBP7.57□□□□□ -1.2
VPS13B-205ENST00000493587 OLFM4Q6UX06 510 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 PTF1AQ7RTS3 328 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 NEK9Q8TD19 979 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 ZNF653Q96CK0 615 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 MOV10L1Q9BXT6 1211 aaKnown RBP7.57□□□□□ -1.2
VPS13B-205ENST00000493587 LGR6Q9HBX8 967 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 SCOCQ9UIL1 159 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 PHF24Q9UPV7 400 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 N6AMT1Q9Y5N5 214 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 FOCADQ5VW36 1801 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 TRIM43BA6NCK2 446 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 A6NHS1 94 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 PDE6CP51160 858 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 CRELD2Q6UXH1 353 aaPredicted RBP7.57□□□□□ -1.2
VPS13B-205ENST00000493587 ANKS4BQ8N8V4 417 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 ZBTB8BQ8NAP8 495 aaPredicted RBP7.57□□□□□ -1.2
VPS13B-205ENST00000493587 ANKRD24Q8TF21 1146 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 DPF2Q92785 391 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 HIC2Q96JB3 615 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 TTC14Q96N46 770 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 AGAP3Q96P47 875 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 RPS6KC1Q96S38 1066 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 SH3GL2Q99962 352 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 OCEL1Q9H607 264 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 GPCPD1Q9NPB8 672 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 SLC5A4Q9NY91 659 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 CEP126Q9P2H0 1117 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 TUBGCP4Q9UGJ1 667 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 R3HDM2Q9Y2K5 976 aaKnown RBP7.57□□□□□ -1.2
VPS13B-205ENST00000493587 DDX60LQ5H9U9 1706 aaKnown RBP7.57□□□□□ -1.2
VPS13B-205ENST00000493587 SOWAHDA6NJG2 315 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 GNAT3A8MTJ3 354 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 AGPSO00116 658 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 TROVE2P10155 538 aaKnown RBP eCLIP7.57□□□□□ -1.2
VPS13B-205ENST00000493587 XRCC4Q13426 336 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 TSNAXIP1Q2TAA8 658 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 PUS10Q3MIT2 529 aaKnown RBP7.57□□□□□ -1.2
VPS13B-205ENST00000493587 CAPN12Q6ZSI9 719 aa7.57□□□□□ -1.2
VPS13B-205ENST00000493587 STAG2Q8N3U4 1231 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms