RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 PHLDB3Q6NSJ2 640 aa5.87□□□□□ -1.47
SYCP1-208ENST00000493377 PHACTR4Q8IZ21 702 aa5.87□□□□□ -1.47
SYCP1-208ENST00000493377 TSPAN17Q96FV3 270 aa5.87□□□□□ -1.47
SYCP1-208ENST00000493377 RPL6Q02878 288 aaKnown RBP5.86□□□□□ -1.47
SYCP1-208ENST00000493377 LDLRAD3Q86YD5 345 aa5.86□□□□□ -1.47
SYCP1-208ENST00000493377 NEU4Q8WWR8 484 aaPredicted RBP5.86□□□□□ -1.47
SYCP1-208ENST00000493377 CSRNP2Q9H175 543 aa5.86□□□□□ -1.47
SYCP1-208ENST00000493377 ANTXR1Q9H6X2 564 aa5.86□□□□□ -1.47
SYCP1-208ENST00000493377 PDLIM7Q9NR12 457 aa5.86□□□□□ -1.47
SYCP1-208ENST00000493377 TMEM88BA6NKF7 163 aa5.85□□□□□ -1.47
SYCP1-208ENST00000493377 ZNF205O95201 554 aa5.85□□□□□ -1.47
SYCP1-208ENST00000493377 PRAMEF1O95521 474 aa5.85□□□□□ -1.47
SYCP1-208ENST00000493377 ZC3H6P61129 1189 aaKnown RBP5.85□□□□□ -1.47
SYCP1-208ENST00000493377 PTH1RQ03431 593 aa5.85□□□□□ -1.47
SYCP1-208ENST00000493377 PRKD1Q15139 912 aaPredicted RBP5.85□□□□□ -1.47
SYCP1-208ENST00000493377 TSNAXIP1Q2TAA8 658 aa5.85□□□□□ -1.47
SYCP1-208ENST00000493377 HS1BP3Q53T59 392 aa5.85□□□□□ -1.47
SYCP1-208ENST00000493377 Q8TCH9 128 aa5.85□□□□□ -1.47
SYCP1-208ENST00000493377 PCDHB5Q9Y5E4 795 aa5.85□□□□□ -1.47
SYCP1-208ENST00000493377 SIGLEC6O43699 453 aa5.84□□□□□ -1.47
SYCP1-208ENST00000493377 ONECUT2O95948 504 aa5.84□□□□□ -1.47
SYCP1-208ENST00000493377 NRN1LQ496H8 165 aa5.84□□□□□ -1.47
SYCP1-208ENST00000493377 RETREG2Q8NC44 543 aa5.84□□□□□ -1.47
SYCP1-208ENST00000493377 TMEM52Q8NDY8 209 aa5.84□□□□□ -1.47
SYCP1-208ENST00000493377 AGAP2Q99490 1192 aa5.84□□□□□ -1.47
SYCP1-208ENST00000493377 PCDH18Q9HCL0 1135 aa5.84□□□□□ -1.47
SYCP1-208ENST00000493377 CORINQ9Y5Q5 1042 aa5.84□□□□□ -1.47
SYCP1-208ENST00000493377 BMP8BP34820 402 aa5.83□□□□□ -1.48
SYCP1-208ENST00000493377 PPP2CBP62714 309 aa5.83□□□□□ -1.48
SYCP1-208ENST00000493377 PPP2CAP67775 309 aa5.83□□□□□ -1.48
SYCP1-208ENST00000493377 NBPF9Q3BBW0 867 aa5.83□□□□□ -1.48
SYCP1-208ENST00000493377 LSM12Q3MHD2 195 aaKnown RBP5.83□□□□□ -1.48
SYCP1-208ENST00000493377 SLFN13Q68D06 897 aa5.83□□□□□ -1.48
SYCP1-208ENST00000493377 AEBP1Q8IUX7 1158 aa5.83□□□□□ -1.48
SYCP1-208ENST00000493377 GIPC1O14908 333 aa5.82□□□□□ -1.48
SYCP1-208ENST00000493377 CYP2C8P10632 490 aa5.82□□□□□ -1.48
SYCP1-208ENST00000493377 CORO7P57737 925 aa5.82□□□□□ -1.48
SYCP1-208ENST00000493377 HLA-DQA1Q5Y7H0 255 aa5.82□□□□□ -1.48
SYCP1-208ENST00000493377 JAMLQ86YT9 394 aa5.82□□□□□ -1.48
SYCP1-208ENST00000493377 RBCK1Q9BYM8 510 aa5.82□□□□□ -1.48
SYCP1-208ENST00000493377 MIR1-1HGQ9H1L0 117 aa5.82□□□□□ -1.48
SYCP1-208ENST00000493377 JADE2Q9NQC1 790 aa5.82□□□□□ -1.48
SYCP1-208ENST00000493377 KRTAP10-6P60371 365 aaPredicted RBP5.81□□□□□ -1.48
SYCP1-208ENST00000493377 TRIM26Q12899 539 aaPredicted RBP5.81□□□□□ -1.48
SYCP1-208ENST00000493377 ARHGEF18Q6ZSZ5 1173 aa5.81□□□□□ -1.48
SYCP1-208ENST00000493377 MRGPRGQ86SM5 289 aa5.81□□□□□ -1.48
SYCP1-208ENST00000493377 DDX11Q96FC9 970 aa5.81□□□□□ -1.48
SYCP1-208ENST00000493377 C11orf84Q9BUA3 381 aaPredicted RBP5.81□□□□□ -1.48
SYCP1-208ENST00000493377 OSBPL7Q9BZF2 842 aa5.81□□□□□ -1.48
SYCP1-208ENST00000493377 AP5S1Q9NUS5 200 aa5.81□□□□□ -1.48
SYCP1-208ENST00000493377 PNMA6FA0A0J9YX94 578 aa5.8□□□□□ -1.48
SYCP1-208ENST00000493377 SNW1Q13573 536 aaKnown RBP5.8□□□□□ -1.48
SYCP1-208ENST00000493377 SLC9A5Q14940 896 aa5.8□□□□□ -1.48
SYCP1-208ENST00000493377 PCSK4Q6UW60 755 aa5.8□□□□□ -1.48
SYCP1-208ENST00000493377 KYQ8NBH2 561 aa5.8□□□□□ -1.48
SYCP1-208ENST00000493377 GORASP1Q9BQQ3 440 aa5.8□□□□□ -1.48
SYCP1-208ENST00000493377 DMRT1Q9Y5R6 373 aa5.8□□□□□ -1.48
SYCP1-208ENST00000493377 GBP1P32455 592 aa5.79□□□□□ -1.48
SYCP1-208ENST00000493377 MRPS21P82921 87 aaKnown RBP5.79□□□□□ -1.48
SYCP1-208ENST00000493377 ENOX2Q16206 610 aaKnown RBP5.79□□□□□ -1.48
SYCP1-208ENST00000493377 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.79□□□□□ -1.48
SYCP1-208ENST00000493377 BCAS3Q9H6U6 928 aa5.79□□□□□ -1.48
SYCP1-208ENST00000493377 CHST7Q9NS84 486 aa5.79□□□□□ -1.48
SYCP1-208ENST00000493377 AGMOQ6ZNB7 445 aa5.78□□□□□ -1.48
SYCP1-208ENST00000493377 TTLL6Q8N841 843 aa5.78□□□□□ -1.48
SYCP1-208ENST00000493377 NAT16Q8N8M0 369 aa5.78□□□□□ -1.48
SYCP1-208ENST00000493377 GLI4P10075 376 aa5.77□□□□□ -1.49
SYCP1-208ENST00000493377 VAV1P15498 845 aa5.77□□□□□ -1.49
SYCP1-208ENST00000493377 USP39Q53GS9 565 aaKnown RBP5.77□□□□□ -1.49
SYCP1-208ENST00000493377 PRR31Q5SQ13 230 aa5.77□□□□□ -1.49
SYCP1-208ENST00000493377 DIEXFQ68CQ4 756 aaKnown RBP5.77□□□□□ -1.49
SYCP1-208ENST00000493377 PKN3Q6P5Z2 889 aa5.77□□□□□ -1.49
SYCP1-208ENST00000493377 FBF1Q8TES7 1133 aa5.77□□□□□ -1.49
SYCP1-208ENST00000493377 KIF2CQ99661 725 aa5.77□□□□□ -1.49
SYCP1-208ENST00000493377 CHURC1-FNTBB4DL54 471 aa5.76□□□□□ -1.49
SYCP1-208ENST00000493377 DDX3XO00571 662 aaKnown RBP eCLIP5.76□□□□□ -1.49
SYCP1-208ENST00000493377 KLHL3Q9UH77 587 aa5.76□□□□□ -1.49
SYCP1-208ENST00000493377 ADH4P08319 380 aa5.75□□□□□ -1.49
SYCP1-208ENST00000493377 TACR1P25103 407 aa5.75□□□□□ -1.49
SYCP1-208ENST00000493377 NBPF12Q5TAG4 269 aaPredicted RBP5.75□□□□□ -1.49
SYCP1-208ENST00000493377 ZKSCAN2Q63HK3 967 aa5.75□□□□□ -1.49
SYCP1-208ENST00000493377 CYP2R1Q6VVX0 501 aa5.75□□□□□ -1.49
SYCP1-208ENST00000493377 MBD6Q96DN6 1003 aa5.75□□□□□ -1.49
SYCP1-208ENST00000493377 PEX11GQ96HA9 241 aa5.75□□□□□ -1.49
SYCP1-208ENST00000493377 MEGF9Q9H1U4 602 aa5.75□□□□□ -1.49
SYCP1-208ENST00000493377 FAM8A1Q9UBU6 413 aa5.75□□□□□ -1.49
SYCP1-208ENST00000493377 NUDT5Q9UKK9 219 aa5.75□□□□□ -1.49
SYCP1-208ENST00000493377 MINPP1Q9UNW1 487 aa5.75□□□□□ -1.49
SYCP1-208ENST00000493377 TTF2Q9UNY4 1162 aaKnown RBP5.75□□□□□ -1.49
SYCP1-208ENST00000493377 PROB1E7EW31 1015 aa5.74□□□□□ -1.49
SYCP1-208ENST00000493377 RGS13O14921 159 aa5.74□□□□□ -1.49
SYCP1-208ENST00000493377 C8BP07358 591 aa5.74□□□□□ -1.49
SYCP1-208ENST00000493377 CTSKP43235 329 aa5.74□□□□□ -1.49
SYCP1-208ENST00000493377 DAB2P98082 770 aa5.74□□□□□ -1.49
SYCP1-208ENST00000493377 CABP7Q86V35 215 aa5.74□□□□□ -1.49
SYCP1-208ENST00000493377 NLGN2Q8NFZ4 835 aa5.74□□□□□ -1.49
SYCP1-208ENST00000493377 PRR36Q9H6K5 1346 aa5.74□□□□□ -1.49
SYCP1-208ENST00000493377 ZBTB7AO95365 584 aa5.73□□□□□ -1.49
SYCP1-208ENST00000493377 RTP2Q5QGT7 225 aa5.73□□□□□ -1.49
SYCP1-208ENST00000493377 ADOQ96SZ5 270 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms