RNA–Protein interactions for RNA: ENST00000493212.1

PHTF1-212, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 956 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-212ENST00000493212 TICAM2Q86XR7 235 aa24.49■■□□□ 1.51
PHTF1-212ENST00000493212 FAM126BQ8IXS8 530 aa24.49■■□□□ 1.51
PHTF1-212ENST00000493212 CRBNQ96SW2 442 aa24.49■■□□□ 1.51
PHTF1-212ENST00000493212 CYP39A1Q9NYL5 469 aa24.49■■□□□ 1.51
PHTF1-212ENST00000493212 CCDC174Q6PII3 467 aa24.48■■□□□ 1.51
PHTF1-212ENST00000493212 BTNL9Q6UXG8 535 aa24.48■■□□□ 1.51
PHTF1-212ENST00000493212 SLC43A3Q8NBI5 491 aa24.48■■□□□ 1.51
PHTF1-212ENST00000493212 DCAF4Q8WV16 495 aa24.48■■□□□ 1.51
PHTF1-212ENST00000493212 FAM227BQ96M60 508 aa24.48■■□□□ 1.51
PHTF1-212ENST00000493212 RANBP17Q9H2T7 1088 aaKnown RBP24.48■■□□□ 1.51
PHTF1-212ENST00000493212 DDX49Q9Y6V7 483 aaKnown RBP24.48■■□□□ 1.51
PHTF1-212ENST00000493212 ZMYM6O95789 1325 aa24.47■■□□□ 1.51
PHTF1-212ENST00000493212 A0A0D9SFI3 127 aa24.47■■□□□ 1.51
PHTF1-212ENST00000493212 FGAP02671 866 aa24.47■■□□□ 1.51
PHTF1-212ENST00000493212 ICAM1P05362 532 aa24.47■■□□□ 1.51
PHTF1-212ENST00000493212 BEX3Q00994 111 aa24.47■■□□□ 1.51
PHTF1-212ENST00000493212 C16orf59Q7L2K0 433 aa24.47■■□□□ 1.51
PHTF1-212ENST00000493212 MORC4Q8TE76 937 aa24.47■■□□□ 1.51
PHTF1-212ENST00000493212 PRUNE2Q8WUY3 3088 aa24.47■■□□□ 1.51
PHTF1-212ENST00000493212 CD4P01730 458 aa24.46■■□□□ 1.51
PHTF1-212ENST00000493212 MCMDC2Q4G0Z9 681 aa24.46■■□□□ 1.51
PHTF1-212ENST00000493212 TAPT1Q6NXT6 567 aa24.46■■□□□ 1.51
PHTF1-212ENST00000493212 MYLIPQ8WY64 445 aa24.46■■□□□ 1.51
PHTF1-212ENST00000493212 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.46■■□□□ 1.51
PHTF1-212ENST00000493212 TCP11L1Q9NUJ3 509 aa24.46■■□□□ 1.51
PHTF1-212ENST00000493212 CCPG1Q9ULG6 757 aa24.46■■□□□ 1.51
PHTF1-212ENST00000493212 SMPD1P17405 629 aa24.45■■□□□ 1.5
PHTF1-212ENST00000493212 RASIP1Q5U651 963 aa24.45■■□□□ 1.5
PHTF1-212ENST00000493212 TTBK2Q6IQ55 1244 aa24.45■■□□□ 1.5
PHTF1-212ENST00000493212 TLK2Q86UE8 772 aa24.45■■□□□ 1.5
PHTF1-212ENST00000493212 ZNF589Q86UQ0 364 aaPredicted RBP24.45■■□□□ 1.5
PHTF1-212ENST00000493212 VTI1AQ96AJ9 217 aa24.45■■□□□ 1.5
PHTF1-212ENST00000493212 COL25A1Q9BXS0 654 aaPredicted RBP24.45■■□□□ 1.5
PHTF1-212ENST00000493212 PDGFCQ9NRA1 345 aa24.45■■□□□ 1.5
PHTF1-212ENST00000493212 ZBTB47Q9UFB7 747 aaPredicted RBP24.45■■□□□ 1.5
PHTF1-212ENST00000493212 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.44■■□□□ 1.5
PHTF1-212ENST00000493212 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.44■■□□□ 1.5
PHTF1-212ENST00000493212 HSPD1P10809 573 aaKnown RBP24.44■■□□□ 1.5
PHTF1-212ENST00000493212 PTGS1P23219 599 aa24.44■■□□□ 1.5
PHTF1-212ENST00000493212 PPIGQ13427 754 aaKnown RBP eCLIP24.44■■□□□ 1.52e-6■■□□□ 11.7
PHTF1-212ENST00000493212 TMEM240Q5SV17 173 aa24.44■■□□□ 1.5
PHTF1-212ENST00000493212 MAFAQ8NHW3 353 aaPredicted RBP24.44■■□□□ 1.5
PHTF1-212ENST00000493212 PURBQ96QR8 312 aaKnown RBP24.44■■□□□ 1.5
PHTF1-212ENST00000493212 TMEM47Q9BQJ4 181 aa24.44■■□□□ 1.5
PHTF1-212ENST00000493212 MTMR7Q9Y216 660 aa24.44■■□□□ 1.5
PHTF1-212ENST00000493212 Q9Y3F1 56 aa24.44■■□□□ 1.5
PHTF1-212ENST00000493212 VCANP13611 3396 aa24.43■■□□□ 1.5
PHTF1-212ENST00000493212 GRIN2DO15399 1336 aa24.43■■□□□ 1.5
PHTF1-212ENST00000493212 CABYRO75952 493 aa24.43■■□□□ 1.5
PHTF1-212ENST00000493212 TOP1P11387 765 aaKnown RBP24.43■■□□□ 1.5
PHTF1-212ENST00000493212 CSF2RAP15509 400 aa24.43■■□□□ 1.5
PHTF1-212ENST00000493212 DNAJB2P25686 324 aa24.43■■□□□ 1.5
PHTF1-212ENST00000493212 SLC16A2P36021 539 aa24.43■■□□□ 1.5
PHTF1-212ENST00000493212 FSCN1Q16658 493 aaKnown RBP24.43■■□□□ 1.5
PHTF1-212ENST00000493212 CCDC96Q2M329 555 aa24.43■■□□□ 1.5
PHTF1-212ENST00000493212 TMEM63BQ5T3F8 832 aa24.43■■□□□ 1.5
PHTF1-212ENST00000493212 IQSEC1Q6DN90 963 aa24.43■■□□□ 1.5
PHTF1-212ENST00000493212 CXCL17Q6UXB2 119 aa24.43■■□□□ 1.5
PHTF1-212ENST00000493212 FBXO16Q8IX29 292 aaPredicted RBP24.43■■□□□ 1.5
PHTF1-212ENST00000493212 TLR3O15455 904 aaKnown RBP24.42■■□□□ 1.5
PHTF1-212ENST00000493212 SYDE2Q5VT97 1194 aa24.42■■□□□ 1.5
PHTF1-212ENST00000493212 NSMFQ6X4W1 530 aa24.42■■□□□ 1.5
PHTF1-212ENST00000493212 NOL8Q76FK4 1167 aaKnown RBP24.42■■□□□ 1.5
PHTF1-212ENST00000493212 VTA1Q9NP79 307 aa24.42■■□□□ 1.5
PHTF1-212ENST00000493212 DYNC1LI2O43237 492 aaPredicted RBP24.41■■□□□ 1.5
PHTF1-212ENST00000493212 PDHBP11177 359 aa24.41■■□□□ 1.5
PHTF1-212ENST00000493212 NMIQ13287 307 aaPredicted RBP24.41■■□□□ 1.5
PHTF1-212ENST00000493212 BAATQ14032 418 aaPredicted RBP24.41■■□□□ 1.5
PHTF1-212ENST00000493212 RRP12Q5JTH9 1297 aaKnown RBP24.41■■□□□ 1.5
PHTF1-212ENST00000493212 EEPD1Q7L9B9 569 aa24.41■■□□□ 1.5
PHTF1-212ENST00000493212 TMEM199Q8N511 208 aa24.41■■□□□ 1.5
PHTF1-212ENST00000493212 PPP1R12CQ9BZL4 782 aa24.41■■□□□ 1.5
PHTF1-212ENST00000493212 TOMM22Q9NS69 142 aa24.41■■□□□ 1.5
PHTF1-212ENST00000493212 LOC102724159A0A0B4J2E5 919 aa24.4■■□□□ 1.5
PHTF1-212ENST00000493212 NFIBO00712 420 aa24.4■■□□□ 1.5
PHTF1-212ENST00000493212 SNHG28P0DPA3 235 aa24.4■■□□□ 1.5
PHTF1-212ENST00000493212 ITGA7Q13683 1181 aa24.4■■□□□ 1.5
PHTF1-212ENST00000493212 PWP2Q15269 919 aaKnown RBP24.4■■□□□ 1.5
PHTF1-212ENST00000493212 AP5M1Q9H0R1 490 aa24.4■■□□□ 1.5
PHTF1-212ENST00000493212 FRMPD2Q68DX3 1309 aaPredicted RBP24.39■■□□□ 1.5
PHTF1-212ENST00000493212 CCDC171Q6TFL3 1326 aa24.39■■□□□ 1.5
PHTF1-212ENST00000493212 PCP11498 1178 aaKnown RBP24.39■■□□□ 1.49
PHTF1-212ENST00000493212 FOSL2P15408 326 aa24.39■■□□□ 1.49
PHTF1-212ENST00000493212 CYP2C18P33260 490 aa24.39■■□□□ 1.49
PHTF1-212ENST00000493212 ALDH5A1P51649 535 aaPredicted RBP24.39■■□□□ 1.49
PHTF1-212ENST00000493212 GRIN2CQ14957 1233 aa24.39■■□□□ 1.49
PHTF1-212ENST00000493212 SMC5Q8IY18 1101 aa24.39■■□□□ 1.49
PHTF1-212ENST00000493212 CLEC4DQ8WXI8 215 aa24.39■■□□□ 1.49
PHTF1-212ENST00000493212 TTC14Q96N46 770 aa24.39■■□□□ 1.49
PHTF1-212ENST00000493212 SEZ6LQ9BYH1 1024 aa24.39■■□□□ 1.49
PHTF1-212ENST00000493212 CHD9Q3L8U1 2897 aa24.38■■□□□ 1.49
PHTF1-212ENST00000493212 HAND2P61296 217 aa24.38■■□□□ 1.49
PHTF1-212ENST00000493212 ZNF543Q08ER8 600 aa24.38■■□□□ 1.49
PHTF1-212ENST00000493212 DUSP28Q4G0W2 176 aa24.38■■□□□ 1.49
PHTF1-212ENST00000493212 AKNAD1Q5T1N1 836 aa24.38■■□□□ 1.49
PHTF1-212ENST00000493212 PSRC1Q6PGN9 363 aaPredicted RBP24.38■■□□□ 1.49
PHTF1-212ENST00000493212 ZNF365Q70YC5 407 aa24.38■■□□□ 1.49
PHTF1-212ENST00000493212 TBC1D10CQ8IV04 446 aa24.38■■□□□ 1.49
PHTF1-212ENST00000493212 LNPKQ9C0E8 428 aa24.38■■□□□ 1.49
PHTF1-212ENST00000493212 GPCPD1Q9NPB8 672 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms