RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 SYT1P21579 422 aa10.81□□□□□ -0.68
CSTF1-206ENST00000493039 OSBPP22059 807 aa10.81□□□□□ -0.68
CSTF1-206ENST00000493039 PABPC4Q13310 644 aaKnown RBP eCLIP10.81□□□□□ -0.683e-8■■■■■ 34.7
CSTF1-206ENST00000493039 ALG1Q9BT22 464 aa10.81□□□□□ -0.68
CSTF1-206ENST00000493039 ZCCHC17Q9NP64 241 aaKnown RBP10.81□□□□□ -0.68
CSTF1-206ENST00000493039 PCDHA1Q9Y5I3 950 aa10.81□□□□□ -0.68
CSTF1-206ENST00000493039 HSP90AA1P07900 732 aaKnown RBP10.8□□□□□ -0.68
CSTF1-206ENST00000493039 MAP2K2P36507 400 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 SREBF2Q12772 1141 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 HEATR3Q7Z4Q2 680 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 TBC1D5Q92609 795 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 AMNQ9BXJ7 453 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 KCNJ14Q9UNX9 436 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 CENPFP49454 3210 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 ZBED4O75132 1171 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 FDX1P10109 184 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 FOSBP53539 338 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 AKAP17AQ02040 695 aaKnown RBP10.8□□□□□ -0.68
CSTF1-206ENST00000493039 GUCY1B3Q02153 619 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 USH1GQ495M9 461 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 FBXO11Q86XK2 927 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 PLCD3Q8N3E9 789 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 FBXO18Q8NFZ0 1043 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 CLEC4DQ8WXI8 215 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 RBM27Q9P2N5 1060 aaKnown RBP10.8□□□□□ -0.68
CSTF1-206ENST00000493039 SEC63Q9UGP8 760 aaKnown RBP10.8□□□□□ -0.68
CSTF1-206ENST00000493039 PNMA3Q9UL41 463 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 RABGAP1Q9Y3P9 1069 aa10.8□□□□□ -0.68
CSTF1-206ENST00000493039 STAT3P40763 770 aa10.79□□□□□ -0.68
CSTF1-206ENST00000493039 OAZ1P54368 228 aa10.79□□□□□ -0.68
CSTF1-206ENST00000493039 CRHR2Q13324 411 aa10.79□□□□□ -0.68
CSTF1-206ENST00000493039 TAF1CQ15572 869 aaPredicted RBP10.79□□□□□ -0.68
CSTF1-206ENST00000493039 MUM1L1Q5H9M0 696 aa10.79□□□□□ -0.68
CSTF1-206ENST00000493039 LARP1BQ659C4 914 aaKnown RBP10.79□□□□□ -0.68
CSTF1-206ENST00000493039 C17orf99Q6UX52 265 aa10.79□□□□□ -0.68
CSTF1-206ENST00000493039 ANKRD13CQ8N6S4 541 aa10.79□□□□□ -0.68
CSTF1-206ENST00000493039 MB21D1Q8N884 522 aa10.79□□□□□ -0.68
CSTF1-206ENST00000493039 PARK7Q99497 189 aaKnown RBP10.79□□□□□ -0.68
CSTF1-206ENST00000493039 PAGR1Q9BTK6 254 aa10.79□□□□□ -0.68
CSTF1-206ENST00000493039 PHF20Q9BVI0 1012 aa10.79□□□□□ -0.68
CSTF1-206ENST00000493039 MOV10L1Q9BXT6 1211 aaKnown RBP10.79□□□□□ -0.68
CSTF1-206ENST00000493039 SPATC1LQ9H0A9 340 aa10.79□□□□□ -0.68
CSTF1-206ENST00000493039 ZDHHC9Q9Y397 364 aa10.79□□□□□ -0.68
CSTF1-206ENST00000493039 HTTP42858 3142 aa10.79□□□□□ -0.68
CSTF1-206ENST00000493039 CA12O43570 354 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 TLR2O60603 784 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 BCRP11274 1271 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 NBR1Q14596 966 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 KRT40Q6A162 431 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 SNRNP48Q6IEG0 339 aaKnown RBP10.78□□□□□ -0.68
CSTF1-206ENST00000493039 FAM184AQ8NB25 1140 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 OXER1Q8TDS5 423 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 SMCR8Q8TEV9 937 aaPredicted RBP10.78□□□□□ -0.68
CSTF1-206ENST00000493039 TEX13BQ9BXU2 312 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 ZMYND12Q9H0C1 365 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 PORCNQ9H237 461 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 MORF4L1Q9UBU8 362 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 CCPG1Q9ULG6 757 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 A0A0G2JMZ2 1700 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 M0R2N6 131 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 NFIBO00712 420 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 ERVK-9P63128 1117 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 ERVK-24P63145 666 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 RIOX2Q8IUF8 465 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 C8orf76Q96K31 380 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 SH3GLB2Q9NR46 395 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 CPA4Q9UI42 421 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 MTMR6Q9Y217 621 aa10.78□□□□□ -0.68
CSTF1-206ENST00000493039 MEIS2O14770 477 aa10.77□□□□□ -0.68
CSTF1-206ENST00000493039 ALAS1P13196 640 aa10.77□□□□□ -0.68
CSTF1-206ENST00000493039 GCLCP48506 637 aaPredicted RBP10.77□□□□□ -0.68
CSTF1-206ENST00000493039 PLS1Q14651 629 aa10.77□□□□□ -0.68
CSTF1-206ENST00000493039 NOM1Q5C9Z4 860 aaKnown RBP10.77□□□□□ -0.68
CSTF1-206ENST00000493039 WASF1Q92558 559 aa10.77□□□□□ -0.68
CSTF1-206ENST00000493039 HOMER2Q9NSB8 354 aa10.77□□□□□ -0.68
CSTF1-206ENST00000493039 RNF186Q9NXI6 227 aa10.77□□□□□ -0.68
CSTF1-206ENST00000493039 COL11A1P12107 1806 aaPredicted RBP10.77□□□□□ -0.69
CSTF1-206ENST00000493039 SMCO2A6NFE2 343 aa10.77□□□□□ -0.69
CSTF1-206ENST00000493039 KIF28PB7ZC32 967 aa10.77□□□□□ -0.69
CSTF1-206ENST00000493039 hCG_1984214I3L0E3 225 aa10.77□□□□□ -0.69
CSTF1-206ENST00000493039 STX6O43752 255 aa10.77□□□□□ -0.69
CSTF1-206ENST00000493039 MMP1P03956 469 aa10.77□□□□□ -0.69
CSTF1-206ENST00000493039 NAPAP54920 295 aa10.77□□□□□ -0.69
CSTF1-206ENST00000493039 CAP1Q01518 475 aa10.77□□□□□ -0.69
CSTF1-206ENST00000493039 EARS2Q5JPH6 523 aaKnown RBP10.77□□□□□ -0.69
CSTF1-206ENST00000493039 USP17L6PQ6QN14 398 aa10.77□□□□□ -0.69
CSTF1-206ENST00000493039 REM2Q8IYK8 340 aaPredicted RBP10.77□□□□□ -0.69
CSTF1-206ENST00000493039 ZNF713Q8N859 430 aaPredicted RBP10.77□□□□□ -0.69
CSTF1-206ENST00000493039 GPRC5AQ8NFJ5 357 aa10.77□□□□□ -0.69
CSTF1-206ENST00000493039 TRERF1Q96PN7 1200 aa10.77□□□□□ -0.69
CSTF1-206ENST00000493039 ESYT2A0FGR8 921 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 BTBD18B2RXH4 712 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 TRPA1O75762 1119 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 TBC1D8O95759 1140 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 ERCC3P19447 782 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 NR5A1Q13285 461 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 FAM110CQ1W6H9 321 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 RASGRP4Q8TDF6 673 aa10.76□□□□□ -0.69
CSTF1-206ENST00000493039 GTF3C2Q8WUA4 911 aaPredicted RBP10.76□□□□□ -0.69
CSTF1-206ENST00000493039 TNFRSF25Q93038 417 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms