RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 RLFQ13129 1914 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 FAM205CA6NFA0 338 aa16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 CXCL11O14625 94 aa16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 TOB1P50616 345 aaPredicted RBP16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 MRPL12P52815 198 aaKnown RBP16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 PPIL2Q13356 520 aa16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 PAXIP1Q6ZW49 1069 aaPredicted RBP16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 OPTNQ96CV9 577 aa16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 PSTPIP2Q9H939 334 aa16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 FDX1P10109 184 aa16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 TRAPPC10P48553 1259 aa16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 UBE2HP62256 183 aa16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 STK38Q15208 465 aa16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 SF3A1Q15459 793 aaKnown RBP16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 NOM1Q5C9Z4 860 aaKnown RBP16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 CCDC174Q6PII3 467 aa16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 KRT25Q7Z3Z0 450 aa16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 LINC00301Q8NCQ3 95 aa16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 SLC10A4Q96EP9 437 aa16.1■□□□□ 0.17
PDZRN3-210ENST00000492909 A0A0G2JLL6 359 aaPredicted RBP16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 USP17L15C9J2P7 530 aa16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 USP17L13C9JLJ4 530 aa16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 USP17L11C9JVI0 530 aa16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 USP17L18D6R9N7 530 aa16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 USP17L22D6RA61 530 aa16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 USP17L17D6RBQ6 530 aa16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 USP17L19D6RCP7 530 aa16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 USP17L20D6RJB6 530 aa16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 GADD45BO75293 160 aaPredicted RBP16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 USP17L24Q0WX57 530 aa16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 CYP4F22Q6NT55 531 aa16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 PRRT2Q7Z6L0 340 aaPredicted RBP16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 KCNG4Q8TDN1 519 aa16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 BIN2Q9UBW5 565 aaPredicted RBP16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 KCNH4Q9UQ05 1017 aa16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 COL11A1P12107 1806 aaPredicted RBP16.09■□□□□ 0.17
PDZRN3-210ENST00000492909 GOLGA6L4A6NEF3 574 aa16.08■□□□□ 0.17
PDZRN3-210ENST00000492909 SPTLC2O15270 562 aa16.08■□□□□ 0.17
PDZRN3-210ENST00000492909 MBD3O95983 291 aa16.08■□□□□ 0.17
PDZRN3-210ENST00000492909 ATP2B1P20020 1258 aa16.08■□□□□ 0.17
PDZRN3-210ENST00000492909 ZNF445P59923 1031 aa16.08■□□□□ 0.17
PDZRN3-210ENST00000492909 SLC39A14Q15043 492 aa16.08■□□□□ 0.17
PDZRN3-210ENST00000492909 DEFB115Q30KQ5 88 aa16.08■□□□□ 0.17
PDZRN3-210ENST00000492909 CATSPERGQ6ZRH7 1159 aa16.08■□□□□ 0.17
PDZRN3-210ENST00000492909 PROCA1Q8NCQ7 364 aaPredicted RBP16.08■□□□□ 0.17
PDZRN3-210ENST00000492909 SLC38A10Q9HBR0 1119 aa16.08■□□□□ 0.17
PDZRN3-210ENST00000492909 CTDP1Q9Y5B0 961 aaPredicted RBP16.08■□□□□ 0.17
PDZRN3-210ENST00000492909 RASSF10A6NK89 507 aa16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 ZBED4O75132 1171 aa16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 ICAM1P05362 532 aa16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 ME1P48163 572 aa16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 ZNF157P51786 506 aaPredicted RBP16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 MKRN3Q13064 507 aaKnown RBP16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 COG2Q14746 738 aa16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 NONOQ15233 471 aaKnown RBP eCLIP16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 JAKMIP3Q5VZ66 844 aa16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 RGMBQ6NW40 437 aa16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 GADL1Q6ZQY3 521 aa16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 PNMA2Q9UL42 364 aa16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 CEP131Q9UPN4 1083 aa16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 PCDHB6Q9Y5E3 794 aa16.08■□□□□ 0.16
PDZRN3-210ENST00000492909 MYPNQ86TC9 1320 aa16.07■□□□□ 0.16
PDZRN3-210ENST00000492909 VWA5AO00534 786 aa16.07■□□□□ 0.16
PDZRN3-210ENST00000492909 DSG3P32926 999 aa16.07■□□□□ 0.16
PDZRN3-210ENST00000492909 CLK2P49760 499 aaKnown RBP16.07■□□□□ 0.16
PDZRN3-210ENST00000492909 PTPAQ15257 358 aa16.07■□□□□ 0.16
PDZRN3-210ENST00000492909 INF2Q27J81 1249 aa16.07■□□□□ 0.16
PDZRN3-210ENST00000492909 TTC38Q5R3I4 469 aa16.07■□□□□ 0.16
PDZRN3-210ENST00000492909 TEX2Q8IWB9 1127 aa16.07■□□□□ 0.16
PDZRN3-210ENST00000492909 JMYQ8N9B5 988 aa16.07■□□□□ 0.16
PDZRN3-210ENST00000492909 ATG4CQ96DT6 458 aa16.07■□□□□ 0.16
PDZRN3-210ENST00000492909 TMEM260Q9NX78 707 aa16.07■□□□□ 0.16
PDZRN3-210ENST00000492909 CCPG1Q9ULG6 757 aa16.07■□□□□ 0.16
PDZRN3-210ENST00000492909 MRPL11Q9Y3B7 192 aaKnown RBP16.07■□□□□ 0.16
PDZRN3-210ENST00000492909 ZNF536O15090 1300 aa16.06■□□□□ 0.16
PDZRN3-210ENST00000492909 ABCB11O95342 1321 aa16.06■□□□□ 0.16
PDZRN3-210ENST00000492909 BMP15O95972 392 aa16.06■□□□□ 0.16
PDZRN3-210ENST00000492909 UBE2SQ16763 222 aa16.06■□□□□ 0.16
PDZRN3-210ENST00000492909 TPRNQ4KMQ1 711 aa16.06■□□□□ 0.16
PDZRN3-210ENST00000492909 TREML2Q5T2D2 321 aa16.06■□□□□ 0.16
PDZRN3-210ENST00000492909 GPT2Q8TD30 523 aa16.06■□□□□ 0.16
PDZRN3-210ENST00000492909 PGBD1Q96JS3 809 aa16.06■□□□□ 0.16
PDZRN3-210ENST00000492909 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.06■□□□□ 0.16
PDZRN3-210ENST00000492909 HOXC10Q9NYD6 342 aa16.06■□□□□ 0.16
PDZRN3-210ENST00000492909 MEIS2O14770 477 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 PPP6R2O75170 966 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 TAL1P17542 331 aaPredicted RBP16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 VEGFBP49765 207 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 SNAPC2Q13487 334 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 MCTP2Q6DN12 878 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 USP17L6PQ6QN14 398 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 FASTKD5Q7L8L6 764 aaKnown RBP16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 CPXCR1Q8N123 301 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 CAPNS2Q96L46 248 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 AGBL1Q96MI9 1066 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 ZIC5Q96T25 663 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 ADAMTS5Q9UNA0 930 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 MYH7BA7E2Y1 1941 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 FAM155AB1AL88 458 aaPredicted RBP16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 OPLAHO14841 1288 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms