RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 KLHDC9Q8NEP7 349 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 SLF1Q9BQI6 1058 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 C1QTNF1Q9BXJ1 281 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 ARMT1Q9H993 441 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 IL1RAPL2Q9NP60 686 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 FBXO28Q9NVF7 368 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 FBXO40Q9UH90 709 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 TBX21Q9UL17 535 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 ZNF214Q9UL59 606 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
TNFRSF9-203ENST00000492571 USP17L12C9JPN9 530 aa11.68□□□□□ -0.54
TNFRSF9-203ENST00000492571 USP17L21D6R901 530 aa11.68□□□□□ -0.54
TNFRSF9-203ENST00000492571 CST5P28325 142 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF9-203ENST00000492571 C12orf60Q5U649 245 aa11.68□□□□□ -0.54
TNFRSF9-203ENST00000492571 ZSCAN25Q6NSZ9 544 aa11.68□□□□□ -0.54
TNFRSF9-203ENST00000492571 CLEC10AQ8IUN9 316 aa11.68□□□□□ -0.54
TNFRSF9-203ENST00000492571 CPXCR1Q8N123 301 aa11.68□□□□□ -0.54
TNFRSF9-203ENST00000492571 RHPN1Q8TCX5 695 aa11.68□□□□□ -0.54
TNFRSF9-203ENST00000492571 LENG1Q96BZ8 264 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF9-203ENST00000492571 SEZ6LQ9BYH1 1024 aa11.68□□□□□ -0.54
TNFRSF9-203ENST00000492571 PPP1R12CQ9BZL4 782 aa11.68□□□□□ -0.54
TNFRSF9-203ENST00000492571 MKNK2Q9HBH9 465 aa11.68□□□□□ -0.54
TNFRSF9-203ENST00000492571 LTBP2Q14767 1821 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 ZNF236Q9UL36 1845 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 RLFQ13129 1914 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 GRXCR1A8MXD5 290 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 C3orf80F5H4A9 247 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 ZEB2O60315 1214 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 CABYRO75952 493 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 MBD4O95243 580 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 SNAI1O95863 264 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 ACRP10323 421 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 CDK7P50613 346 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 GJA9P57773 515 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 SKIV2LQ15477 1246 aaKnown RBP11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 CCSAPQ6IQ19 270 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 C16orf86Q6ZW13 317 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 RPUSD2Q8IZ73 545 aaKnown RBP11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 KIF1BPQ96EK5 621 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 ZNF287Q9HBT7 754 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 IL23AQ9NPF7 189 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 FRMPD3Q5JV73 1810 aa11.67□□□□□ -0.54
TNFRSF9-203ENST00000492571 MYH1P12882 1939 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 FOCADQ5VW36 1801 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 TCRBV5S4A2TA0A5A2 114 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 F5H6K3 240 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 PRKAB2O43741 272 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 HMMRO75330 724 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 PLA2G5P39877 138 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 KLRC3Q07444 240 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 CCDC144BQ3MJ40 725 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 RASIP1Q5U651 963 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 CEP85Q6P2H3 762 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 C16orf59Q7L2K0 433 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 CHST13Q8NET6 341 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 HERVK_113Q902F9 699 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 KIFC2Q96AC6 838 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 AP5M1Q9H0R1 490 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 HIPK3Q9H422 1215 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 TSHZ2Q9NRE2 1034 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 PAG1Q9NWQ8 432 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 SLC4A7Q9Y6M7 1214 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 SLC4A4Q9Y6R1 1079 aa11.66□□□□□ -0.54
TNFRSF9-203ENST00000492571 SMAPO00193 183 aa11.65□□□□□ -0.54
TNFRSF9-203ENST00000492571 ATP2A1O14983 1001 aa11.65□□□□□ -0.54
TNFRSF9-203ENST00000492571 CYP2C18P33260 490 aa11.65□□□□□ -0.54
TNFRSF9-203ENST00000492571 ADD2P35612 726 aa11.65□□□□□ -0.54
TNFRSF9-203ENST00000492571 PPP2R2DQ66LE6 453 aa11.65□□□□□ -0.54
TNFRSF9-203ENST00000492571 OTOP2Q7RTS6 562 aa11.65□□□□□ -0.54
TNFRSF9-203ENST00000492571 FAM126BQ8IXS8 530 aa11.65□□□□□ -0.54
TNFRSF9-203ENST00000492571 MICALL1Q8N3F8 863 aa11.65□□□□□ -0.54
TNFRSF9-203ENST00000492571 NKX2-4Q9H2Z4 354 aa11.65□□□□□ -0.54
TNFRSF9-203ENST00000492571 CDHR5Q9HBB8 845 aa11.65□□□□□ -0.54
TNFRSF9-203ENST00000492571 ARPP21Q9UBL0 812 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF9-203ENST00000492571 ISY1Q9ULR0 285 aaKnown RBP11.65□□□□□ -0.54
TNFRSF9-203ENST00000492571 MUC3AQ02505 3323 aa11.65□□□□□ -0.54
TNFRSF9-203ENST00000492571 DNAJC25-GNG10A0A024R161 153 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 CYP2D7A0A087X1C5 515 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 MYADML2A6NDP7 307 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 ASB14A6NK59 587 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 ZBBXA8MT70 800 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 FDX1P10109 184 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 MS4A1P11836 297 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 OAZ1P54368 228 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 PRSS12P56730 875 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 TNFAIP2Q03169 654 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 UBE3CQ15386 1083 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 CTR9Q6PD62 1173 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 ARMCX2Q7L311 632 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 PACS2Q86VP3 889 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 ZNF444Q8N0Y2 327 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 REPS2Q8NFH8 660 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 UPF3AQ9H1J1 476 aaKnown RBP11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 BOLA2Q9H3K6 86 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 RAVER2Q9HCJ3 691 aaKnown RBP11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 CXXC1Q9P0U4 656 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 NYAP2Q9P242 653 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 CLIP2Q9UDT6 1046 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms