RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 TTYH3Q9C0H2 523 aa18.08■□□□□ 0.48
SEMA4D-220ENST00000492386 MAGEC2Q9UBF1 373 aaPredicted RBP18.08■□□□□ 0.48
SEMA4D-220ENST00000492386 SAP30BPQ9UHR5 308 aaKnown RBP18.08■□□□□ 0.48
SEMA4D-220ENST00000492386 GUCA1BQ9UMX6 200 aa18.08■□□□□ 0.48
SEMA4D-220ENST00000492386 B4DLN1 442 aa18.08■□□□□ 0.48
SEMA4D-220ENST00000492386 PES1O00541 588 aaKnown RBP18.08■□□□□ 0.48
SEMA4D-220ENST00000492386 OR52Z1P0C646 297 aa18.08■□□□□ 0.48
SEMA4D-220ENST00000492386 ST5P78524 1137 aa18.08■□□□□ 0.48
SEMA4D-220ENST00000492386 MEA1Q16626 185 aa18.08■□□□□ 0.48
SEMA4D-220ENST00000492386 TRIM9Q9C026 710 aa18.08■□□□□ 0.48
SEMA4D-220ENST00000492386 HAUS4Q9H6D7 363 aa18.08■□□□□ 0.48
SEMA4D-220ENST00000492386 LEMD3Q9Y2U8 911 aa18.08■□□□□ 0.48
SEMA4D-220ENST00000492386 BTAF1O14981 1849 aa18.07■□□□□ 0.48
SEMA4D-220ENST00000492386 RASSF10A6NK89 507 aa18.07■□□□□ 0.48
SEMA4D-220ENST00000492386 PSMD14O00487 310 aa18.07■□□□□ 0.48
SEMA4D-220ENST00000492386 RHOXF2BP0C7M4 288 aa18.07■□□□□ 0.48
SEMA4D-220ENST00000492386 KRT25Q7Z3Z0 450 aa18.07■□□□□ 0.48
SEMA4D-220ENST00000492386 CSGALNACT2Q8N6G5 542 aa18.07■□□□□ 0.48
SEMA4D-220ENST00000492386 NOA1Q8NC60 698 aaKnown RBP18.07■□□□□ 0.48
SEMA4D-220ENST00000492386 RHOXF2Q9BQY4 288 aa18.07■□□□□ 0.48
SEMA4D-220ENST00000492386 TUBGCP2Q9BSJ2 902 aa18.07■□□□□ 0.48
SEMA4D-220ENST00000492386 RTFDC1Q9BY42 306 aaPredicted RBP18.07■□□□□ 0.48
SEMA4D-220ENST00000492386 ABCB6Q9NP58 842 aa18.07■□□□□ 0.48
SEMA4D-220ENST00000492386 NAPAP54920 295 aa18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 NFIXQ14938 502 aa18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 NCAPH2Q6IBW4 605 aa18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 TRAPPC11Q7Z392 1133 aa18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 P2RX5Q93086 422 aa18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 C7orf25Q9BPX7 421 aa18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 EXOC1Q9NV70 894 aa18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 L1RE1Q9UN81 338 aa18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 CCNT1O60563 726 aaKnown RBP18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 CCNE1P24864 410 aa18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 VSNL1P62760 191 aa18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 NONOQ15233 471 aaKnown RBP eCLIP18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 LETM2Q2VYF4 491 aa18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 ANKRD40Q6AI12 368 aa18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 HDXQ7Z353 690 aa18.06■□□□□ 0.48
SEMA4D-220ENST00000492386 ERLIN1O75477 346 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 PDE4DQ08499 809 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 STK4Q13043 487 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 GRAPQ13588 217 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 ZNF662Q6ZS27 426 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 GRAPLQ8TC17 118 aaPredicted RBP18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 ARHGEF1Q92888 912 aaKnown RBP18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 GPR101Q96P66 508 aaPredicted RBP18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 AGPAT5Q9NUQ2 364 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 TFR2Q9UP52 801 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 SMCO2A6NFE2 343 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 LDHCP07864 332 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 CDK8P49336 464 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 KLK7P49862 253 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 TSR1Q2NL82 804 aaKnown RBP18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 MSL3Q8N5Y2 521 aaKnown RBP18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 EEF2KMTQ96G04 330 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 EYA3Q99504 573 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 MMTAG2Q9BU76 263 aaKnown RBP18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 SUGCTQ9HAC7 445 aa18.05■□□□□ 0.48
SEMA4D-220ENST00000492386 BICDL2A1A5D9 508 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 C16orf86Q6ZW13 317 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 ZNF804AQ7Z570 1209 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 NEK8Q86SG6 692 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 RETREG2Q8NC44 543 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 NEDD1Q8NHV4 660 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 CNOT6LQ96LI5 555 aaKnown RBP18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 C6orf50Q9HD87 102 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 RTCBQ9Y3I0 505 aaKnown RBP18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 FCER1AP12319 257 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 ASIC1P78348 528 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 MCM6Q14566 821 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 MIIPQ5JXC2 388 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 CCDC122Q5T0U0 273 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 USP17L2Q6R6M4 530 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 NEK11Q8NG66 645 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 NUP58Q9BVL2 599 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 ZNF287Q9HBT7 754 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 PDE11AQ9HCR9 933 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 HDAC6Q9UBN7 1215 aa18.04■□□□□ 0.48
SEMA4D-220ENST00000492386 ENC1O14682 589 aa18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 ATP1A1P05023 1023 aaKnown RBP18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 GNA11P29992 359 aa18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 BTDP43251 543 aa18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 GYS2P54840 703 aa18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 KRT83P78385 493 aa18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 TBC1D8BQ0IIM8 1120 aa18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 C15orf52Q6ZUT6 534 aaKnown RBP18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 ZSCAN29Q8IWY8 852 aaPredicted RBP18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 CCDC47Q96A33 483 aaKnown RBP18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 TAF1LQ8IZX4 1826 aa18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 TUBBP07437 444 aa18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 TRIM21P19474 475 aaKnown RBP18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 TECP42680 631 aa18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 ZBED6P86452 979 aa18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 PAPD7Q5XG87 772 aaKnown RBP18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 FAM114A1Q8IWE2 563 aa18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 RRP36Q96EU6 259 aaKnown RBP18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 CALCOCO1Q9P1Z2 691 aa18.03■□□□□ 0.48
SEMA4D-220ENST00000492386 RCCD1A6NED2 376 aa18.02■□□□□ 0.48
SEMA4D-220ENST00000492386 NKRFO15226 690 aaKnown RBP eCLIP18.02■□□□□ 0.48
SEMA4D-220ENST00000492386 COBLL1Q53SF7 1204 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms