RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 FAM161BQ96MY7 647 aa12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 PURBQ96QR8 312 aaKnown RBP12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 ACAD9Q9H845 621 aa12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 FBXO40Q9UH90 709 aa12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 FAM184BQ9ULE4 1060 aa12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 PRR12Q9ULL5 1215 aa12.98□□□□□ -0.33
TMEM39A-211ENST00000491685 GBF1Q92538 1859 aa12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 CTAGE5O15320 804 aa12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 DUSP11O75319 330 aaKnown RBP12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 CDC45O75419 566 aa12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 FGAP02671 866 aa12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 FGRP09769 529 aa12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 ALAS1P13196 640 aa12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 SLC16A2P36021 539 aa12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 HAND2P61296 217 aa12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 ALX1Q15699 326 aa12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 KCNA10Q16322 511 aa12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 RRP12Q5JTH9 1297 aaKnown RBP12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 TBC1D10CQ8IV04 446 aa12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 UPF3AQ9H1J1 476 aaKnown RBP12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 MUC3AQ02505 3323 aa12.97□□□□□ -0.33
TMEM39A-211ENST00000491685 MYH6P13533 1939 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 FRMPD2Q68DX3 1309 aaPredicted RBP12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 CCDC171Q6TFL3 1326 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 RAD50Q92878 1312 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 KIAA0355O15063 1070 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 PLA2G6O60733 806 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 C6orf222P0C671 652 aaPredicted RBP12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 HSPD1P10809 573 aaKnown RBP12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 CST5P28325 142 aaPredicted RBP12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 FAAP100Q0VG06 881 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 CCDC96Q2M329 555 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 TMEM63BQ5T3F8 832 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 RCSD1Q6JBY9 416 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 MAFAQ8NHW3 353 aaPredicted RBP12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 CHURC1Q8WUH1 139 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 TRERF1Q96PN7 1200 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 TSEN34Q9BSV6 310 aaKnown RBP12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 ABHD16BQ9H3Z7 469 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 STARD7Q9NQZ5 370 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 TOMM22Q9NS69 142 aa12.96□□□□□ -0.33
TMEM39A-211ENST00000491685 ZMYM6O95789 1325 aa12.95□□□□□ -0.34
TMEM39A-211ENST00000491685 NEDD4P46934 1319 aa12.95□□□□□ -0.34
TMEM39A-211ENST00000491685 MOXD2PA6NHM9 499 aa12.95□□□□□ -0.34
TMEM39A-211ENST00000491685 ASGR1P07306 291 aa12.95□□□□□ -0.34
TMEM39A-211ENST00000491685 FDX1P10109 184 aa12.95□□□□□ -0.34
TMEM39A-211ENST00000491685 GJA9P57773 515 aa12.95□□□□□ -0.34
TMEM39A-211ENST00000491685 BEX3Q00994 111 aa12.95□□□□□ -0.34
TMEM39A-211ENST00000491685 ANKRD33Q7Z3H0 272 aa12.95□□□□□ -0.34
TMEM39A-211ENST00000491685 CDX2Q99626 313 aaPredicted RBP12.95□□□□□ -0.34
TMEM39A-211ENST00000491685 TMEM47Q9BQJ4 181 aa12.95□□□□□ -0.34
TMEM39A-211ENST00000491685 RANBP17Q9H2T7 1088 aaKnown RBP12.95□□□□□ -0.34
TMEM39A-211ENST00000491685 CYP39A1Q9NYL5 469 aa12.95□□□□□ -0.34
TMEM39A-211ENST00000491685 ZNF213O14771 459 aa12.94□□□□□ -0.34
TMEM39A-211ENST00000491685 EEPD1Q7L9B9 569 aa12.94□□□□□ -0.34
TMEM39A-211ENST00000491685 SKAP1Q86WV1 359 aa12.94□□□□□ -0.34
TMEM39A-211ENST00000491685 FBXO16Q8IX29 292 aaPredicted RBP12.94□□□□□ -0.34
TMEM39A-211ENST00000491685 DCAF4Q8WV16 495 aa12.94□□□□□ -0.34
TMEM39A-211ENST00000491685 DSCC1Q9BVC3 393 aa12.94□□□□□ -0.34
TMEM39A-211ENST00000491685 GPCPD1Q9NPB8 672 aa12.94□□□□□ -0.34
TMEM39A-211ENST00000491685 PDGFCQ9NRA1 345 aa12.94□□□□□ -0.34
TMEM39A-211ENST00000491685 TMEM39AQ9NV64 488 aa12.94□□□□□ -0.34
TMEM39A-211ENST00000491685 TBX21Q9UL17 535 aa12.94□□□□□ -0.34
TMEM39A-211ENST00000491685 CCPG1Q9ULG6 757 aa12.94□□□□□ -0.34
TMEM39A-211ENST00000491685 TTC28Q96AY4 2481 aa12.94□□□□□ -0.34
TMEM39A-211ENST00000491685 NFIBO00712 420 aa12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 ICAM1P05362 532 aa12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 TOP1P11387 765 aaKnown RBP12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 RAG1P15918 1043 aa12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 SMPD1P17405 629 aa12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 CDK7P50613 346 aa12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 TKFCQ3LXA3 575 aa12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 SYDE2Q5VT97 1194 aa12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 BTNL9Q6UXG8 535 aa12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 NSMFQ6X4W1 530 aa12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 NUP133Q8WUM0 1156 aa12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 SYMPKQ92797 1274 aaKnown RBP12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 ZKSCAN3Q9BRR0 538 aa12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 TTYH1Q9H313 450 aaPredicted RBP12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 GNEQ9Y223 722 aaKnown RBP12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 U3KPZ7 1027 aaPredicted RBP12.93□□□□□ -0.34
TMEM39A-211ENST00000491685 SGSM2O43147 1006 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 REC8O95072 547 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 PDHBP11177 359 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 NT5C2P49902 561 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 NKX3-2P78367 333 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 TNFAIP2Q03169 654 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 FPGSQ05932 587 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 IMMTQ16891 758 aaKnown RBP12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 GNASQ5JWF2 1037 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 AKNAD1Q5T1N1 836 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 TAPT1Q6NXT6 567 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 SLC30A10Q6XR72 485 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 TLK2Q86UE8 772 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 FAM126BQ8IXS8 530 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 RNPC3Q96LT9 517 aaKnown RBP12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 GLT1D1Q96MS3 346 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 TOX2Q96NM4 488 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 ESYT1Q9BSJ8 1104 aa12.92□□□□□ -0.34
TMEM39A-211ENST00000491685 IL25Q9H293 177 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms