RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 CTGFP29279 349 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 SYKP43405 635 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 NDUFA8P51970 172 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 GTF2IP78347 998 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 PFKFB3Q16875 520 aaPredicted RBP13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 FAM47AQ5JRC9 791 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 KANK3Q6NY19 840 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 PNMA1Q8ND90 353 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 PPM1EQ8WY54 764 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 OPTNQ96CV9 577 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 MS4A4AQ96JQ5 239 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 GMLQ99445 158 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 BPIFA3Q9BQP9 254 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 TTYH1Q9H313 450 aaPredicted RBP13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 CBX8Q9HC52 389 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 RRAGDQ9NQL2 400 aaPredicted RBP13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 FAM13BQ9NYF5 915 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 JAG2Q9Y219 1238 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 ZKSCAN5Q9Y2L8 839 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 SRPRBQ9Y5M8 271 aaKnown RBP13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 OTOFQ9HC10 1997 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 GOLGA6L19H0YKK7 550 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 ZNF500O60304 480 aaPredicted RBP13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 PFKFB1P16118 471 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 RASA1P20936 1047 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 IREB2P48200 963 aaKnown RBP13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 NOVP48745 357 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 CDK8P49336 464 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 GRIK5Q16478 980 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 CEP57L1Q8IYX8 460 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 OGFOD1Q8N543 542 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 SRBD1Q8N5C6 995 aaKnown RBP13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 SLAIN1Q8ND83 568 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 ELP3Q9H9T3 547 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 IL17RBQ9NRM6 502 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 SWAP70Q9UH65 585 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 KCNJ14Q9UNX9 436 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 DAGLAQ9Y4D2 1042 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 FLT1P17948 1338 aa13.64□□□□□ -0.23
SRGAP3-210ENST00000491467 PLIN4Q96Q06 1357 aa13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 GREB1LQ9C091 1923 aaPredicted RBP13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 TRIM75PA6NK02 468 aa13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 SMIM22K7EJ46 135 aa13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 TOB1P50616 345 aaPredicted RBP13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 MRPS5P82675 430 aaKnown RBP13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 SARM1Q6SZW1 724 aa13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 MAPKAPK5Q8IW41 473 aa13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 ANKRD13AQ8IZ07 590 aa13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 CCDC82Q8N4S0 544 aa13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 FERMT2Q96AC1 680 aa13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 PYM1Q9BRP8 204 aaKnown RBP13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 EPHX3Q9H6B9 360 aa13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 THEGQ9P2T0 379 aa13.63□□□□□ -0.23
SRGAP3-210ENST00000491467 BAZ2BQ9UIF8 2168 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 PALM3A6NDB9 673 aaPredicted RBP13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 SMTNL1A8MU46 457 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 hCG_1984214I3L0E3 225 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 PLEKHA8P1O95397 391 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 TOP1P11387 765 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 MARCKSP29966 332 aaPredicted RBP13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 CDC25BP30305 580 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 PLCD1P51178 756 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 GTF2A2P52657 109 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 NLRP12P59046 1061 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 DHX8Q14562 1220 aaKnown RBP13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 IQCB1Q15051 598 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 ZNF713Q8N859 430 aaPredicted RBP13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 CCDC148Q8NFR7 591 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 CCDC12Q8WUD4 166 aaPredicted RBP13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 DYNLL2Q96FJ2 89 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 NECAB3Q96P71 396 aaPredicted RBP13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 SPZ1Q9BXG8 430 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 CRISPLD2Q9H0B8 497 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 CABP5Q9NP86 173 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 TUBE1Q9UJT0 475 aa13.62□□□□□ -0.23
SRGAP3-210ENST00000491467 BECN2A8MW95 431 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 MYO1BO43795 1136 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 NMT2O60551 498 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 NLRP5P59047 1200 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 TPM4P67936 248 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 PRKCZQ05513 592 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 STRIP1Q5VSL9 837 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 SHC4Q6S5L8 630 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 CMTR1Q8N1G2 835 aaKnown RBP13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 DAGLBQ8NCG7 672 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 TNFRSF25Q93038 417 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 TEKT1Q969V4 418 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 DEFB129Q9H1M3 183 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 DNAJC25Q9H1X3 360 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 C11orf49Q9H6J7 331 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 VPS54Q9P1Q0 977 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 FBXO2Q9UK22 296 aaPredicted RBP13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 KCNH3Q9ULD8 1083 aa13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 TTF2Q9UNY4 1162 aaKnown RBP13.61□□□□□ -0.23
SRGAP3-210ENST00000491467 USP17L3A6NCW0 530 aa13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 USP17L4A6NCW7 530 aa13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 ADCY3O60266 1144 aa13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 INHAP05111 366 aa13.6□□□□□ -0.23
SRGAP3-210ENST00000491467 GABPAQ06546 454 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms