RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 MFSD6Q6ZSS7 791 aa9.77□□□□□ -0.85
APP-216ENST00000491395 NOL8Q76FK4 1167 aaKnown RBP9.77□□□□□ -0.85
APP-216ENST00000491395 EEPD1Q7L9B9 569 aa9.77□□□□□ -0.85
APP-216ENST00000491395 ANKRD33Q7Z3H0 272 aa9.77□□□□□ -0.85
APP-216ENST00000491395 SLC17A8Q8NDX2 589 aa9.77□□□□□ -0.85
APP-216ENST00000491395 NUP133Q8WUM0 1156 aa9.77□□□□□ -0.85
APP-216ENST00000491395 VTI1AQ96AJ9 217 aa9.77□□□□□ -0.85
APP-216ENST00000491395 TOX2Q96NM4 488 aa9.77□□□□□ -0.85
APP-216ENST00000491395 UPF3AQ9H1J1 476 aaKnown RBP9.77□□□□□ -0.85
APP-216ENST00000491395 OSBPL3Q9H4L5 887 aa9.77□□□□□ -0.85
APP-216ENST00000491395 SPC25Q9HBM1 224 aa9.77□□□□□ -0.85
APP-216ENST00000491395 PDGFCQ9NRA1 345 aa9.77□□□□□ -0.85
APP-216ENST00000491395 CYP39A1Q9NYL5 469 aa9.77□□□□□ -0.85
APP-216ENST00000491395 ZMYM6O95789 1325 aa9.77□□□□□ -0.85
APP-216ENST00000491395 SMCHD1A6NHR9 2005 aa9.77□□□□□ -0.85
APP-216ENST00000491395 DCDC2CA8MYV0 355 aa9.76□□□□□ -0.85
APP-216ENST00000491395 ASGR1P07306 291 aa9.76□□□□□ -0.85
APP-216ENST00000491395 RAG1P15918 1043 aa9.76□□□□□ -0.85
APP-216ENST00000491395 SMPD1P17405 629 aa9.76□□□□□ -0.85
APP-216ENST00000491395 CDK7P50613 346 aa9.76□□□□□ -0.85
APP-216ENST00000491395 TNFAIP2Q03169 654 aa9.76□□□□□ -0.85
APP-216ENST00000491395 BAATQ14032 418 aaPredicted RBP9.76□□□□□ -0.85
APP-216ENST00000491395 CWC27Q6UX04 472 aaKnown RBP9.76□□□□□ -0.85
APP-216ENST00000491395 PCSK9Q8NBP7 692 aaKnown RBP9.76□□□□□ -0.85
APP-216ENST00000491395 GLT1D1Q96MS3 346 aa9.76□□□□□ -0.85
APP-216ENST00000491395 FAM161BQ96MY7 647 aa9.76□□□□□ -0.85
APP-216ENST00000491395 ZKSCAN3Q9BRR0 538 aa9.76□□□□□ -0.85
APP-216ENST00000491395 RANBP17Q9H2T7 1088 aaKnown RBP9.76□□□□□ -0.85
APP-216ENST00000491395 COL11A1P12107 1806 aaPredicted RBP9.76□□□□□ -0.85
APP-216ENST00000491395 ELP1O95163 1332 aa9.76□□□□□ -0.85
APP-216ENST00000491395 FRMPD3Q5JV73 1810 aa9.75□□□□□ -0.85
APP-216ENST00000491395 NFIBO00712 420 aa9.75□□□□□ -0.85
APP-216ENST00000491395 ZNF213O14771 459 aa9.75□□□□□ -0.85
APP-216ENST00000491395 DYNC1LI2O43237 492 aaPredicted RBP9.75□□□□□ -0.85
APP-216ENST00000491395 PDHBP11177 359 aa9.75□□□□□ -0.85
APP-216ENST00000491395 MFAP1P55081 439 aaKnown RBP9.75□□□□□ -0.85
APP-216ENST00000491395 NKX3-2P78367 333 aa9.75□□□□□ -0.85
APP-216ENST00000491395 ZNF543Q08ER8 600 aa9.75□□□□□ -0.85
APP-216ENST00000491395 FAM109BQ6ICB4 259 aaPredicted RBP9.75□□□□□ -0.85
APP-216ENST00000491395 TAPT1Q6NXT6 567 aa9.75□□□□□ -0.85
APP-216ENST00000491395 FBXO16Q8IX29 292 aaPredicted RBP9.75□□□□□ -0.85
APP-216ENST00000491395 ESR2Q92731 530 aa9.75□□□□□ -0.85
APP-216ENST00000491395 TTC14Q96N46 770 aa9.75□□□□□ -0.85
APP-216ENST00000491395 GUCD1Q96NT3 240 aa9.75□□□□□ -0.85
APP-216ENST00000491395 AP5M1Q9H0R1 490 aa9.75□□□□□ -0.85
APP-216ENST00000491395 RNF41Q9H4P4 317 aaPredicted RBP9.75□□□□□ -0.85
APP-216ENST00000491395 DIAPH3Q9NSV4 1193 aa9.75□□□□□ -0.85
APP-216ENST00000491395 TBX21Q9UL17 535 aa9.75□□□□□ -0.85
APP-216ENST00000491395 GNEQ9Y223 722 aaKnown RBP9.75□□□□□ -0.85
APP-216ENST00000491395 STXBP5LQ9Y2K9 1186 aa9.75□□□□□ -0.85
APP-216ENST00000491395 ZNFX1Q9P2E3 1918 aaKnown RBP9.75□□□□□ -0.85
APP-216ENST00000491395 NEDD4P46934 1319 aa9.75□□□□□ -0.85
APP-216ENST00000491395 A0A0U1RQG5 324 aaPredicted RBP9.74□□□□□ -0.85
APP-216ENST00000491395 ARVCFO00192 962 aa9.74□□□□□ -0.85
APP-216ENST00000491395 KDM4AO75164 1064 aa9.74□□□□□ -0.85
APP-216ENST00000491395 TIMP1P01033 207 aa9.74□□□□□ -0.85
APP-216ENST00000491395 GOLGA8HP0CJ92 632 aa9.74□□□□□ -0.85
APP-216ENST00000491395 SNHG28P0DPA3 235 aa9.74□□□□□ -0.85
APP-216ENST00000491395 PCP11498 1178 aaKnown RBP9.74□□□□□ -0.85
APP-216ENST00000491395 FPGSQ05932 587 aa9.74□□□□□ -0.85
APP-216ENST00000491395 IQSEC1Q6DN90 963 aa9.74□□□□□ -0.85
APP-216ENST00000491395 CXCL17Q6UXB2 119 aa9.74□□□□□ -0.85
APP-216ENST00000491395 MORC4Q8TE76 937 aa9.74□□□□□ -0.85
APP-216ENST00000491395 CLEC4DQ8WXI8 215 aa9.74□□□□□ -0.85
APP-216ENST00000491395 UBA5Q9GZZ9 404 aa9.74□□□□□ -0.85
APP-216ENST00000491395 CPVLQ9H3G5 476 aa9.74□□□□□ -0.85
APP-216ENST00000491395 SUPT16HQ9Y5B9 1047 aaKnown RBP9.74□□□□□ -0.85
APP-216ENST00000491395 DNAH12Q6ZR08 3092 aa9.74□□□□□ -0.85
APP-216ENST00000491395 PTPDC1A2A3K4 754 aa9.73□□□□□ -0.85
APP-216ENST00000491395 CALML3P27482 149 aa9.73□□□□□ -0.85
APP-216ENST00000491395 PDE4AP27815 886 aa9.73□□□□□ -0.85
APP-216ENST00000491395 SMAD3P84022 425 aaKnown RBP9.73□□□□□ -0.85
APP-216ENST00000491395 FSCN1Q16658 493 aaKnown RBP9.73□□□□□ -0.85
APP-216ENST00000491395 ZNF697Q5TEC3 545 aa9.73□□□□□ -0.85
APP-216ENST00000491395 MFSD5Q6N075 450 aa9.73□□□□□ -0.85
APP-216ENST00000491395 SLC30A10Q6XR72 485 aa9.73□□□□□ -0.85
APP-216ENST00000491395 KIAA1211Q6ZU35 1233 aa9.73□□□□□ -0.85
APP-216ENST00000491395 C16orf59Q7L2K0 433 aa9.73□□□□□ -0.85
APP-216ENST00000491395 TLK2Q86UE8 772 aa9.73□□□□□ -0.85
APP-216ENST00000491395 DGKHQ86XP1 1220 aa9.73□□□□□ -0.85
APP-216ENST00000491395 FAM126BQ8IXS8 530 aa9.73□□□□□ -0.85
APP-216ENST00000491395 RNPC3Q96LT9 517 aaKnown RBP9.73□□□□□ -0.85
APP-216ENST00000491395 SEMA6BQ9H3T3 888 aa9.73□□□□□ -0.85
APP-216ENST00000491395 VTA1Q9NP79 307 aa9.73□□□□□ -0.85
APP-216ENST00000491395 ADD3Q9UEY8 706 aaKnown RBP9.73□□□□□ -0.85
APP-216ENST00000491395 GRIN2DO15399 1336 aa9.73□□□□□ -0.85
APP-216ENST00000491395 CUL9Q8IWT3 2517 aa9.73□□□□□ -0.85
APP-216ENST00000491395 MYH4Q9Y623 1939 aa9.72□□□□□ -0.85
APP-216ENST00000491395 B4E1Z4 1266 aa9.72□□□□□ -0.85
APP-216ENST00000491395 HIP1O00291 1037 aa9.72□□□□□ -0.85
APP-216ENST00000491395 CD4P01730 458 aa9.72□□□□□ -0.85
APP-216ENST00000491395 ALDH5A1P51649 535 aaPredicted RBP9.72□□□□□ -0.85
APP-216ENST00000491395 PSMC6P62333 389 aa9.72□□□□□ -0.85
APP-216ENST00000491395 RNF207Q6ZRF8 634 aa9.72□□□□□ -0.85
APP-216ENST00000491395 SLC43A3Q8NBI5 491 aa9.72□□□□□ -0.85
APP-216ENST00000491395 PNMA1Q8ND90 353 aa9.72□□□□□ -0.85
APP-216ENST00000491395 ANKS1AQ92625 1134 aa9.72□□□□□ -0.85
APP-216ENST00000491395 ZSCAN10Q96SZ4 725 aaPredicted RBP9.72□□□□□ -0.85
APP-216ENST00000491395 CDX2Q99626 313 aaPredicted RBP9.72□□□□□ -0.85
APP-216ENST00000491395 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms