RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 RAG1P15918 1043 aa18.53■□□□□ 0.56
SMPD4-220ENST00000491319 SDSP20132 328 aa18.53■□□□□ 0.56
SMPD4-220ENST00000491319 FAAP100Q0VG06 881 aa18.53■□□□□ 0.56
SMPD4-220ENST00000491319 NSMFQ6X4W1 530 aa18.53■□□□□ 0.56
SMPD4-220ENST00000491319 PCSK9Q8NBP7 692 aaKnown RBP18.53■□□□□ 0.56
SMPD4-220ENST00000491319 SLC17A8Q8NDX2 589 aa18.53■□□□□ 0.56
SMPD4-220ENST00000491319 EXOC6Q8TAG9 804 aa18.53■□□□□ 0.56
SMPD4-220ENST00000491319 GLT1D1Q96MS3 346 aa18.53■□□□□ 0.56
SMPD4-220ENST00000491319 SPC25Q9HBM1 224 aa18.53■□□□□ 0.56
SMPD4-220ENST00000491319 TCP11L1Q9NUJ3 509 aa18.53■□□□□ 0.56
SMPD4-220ENST00000491319 TMEM39AQ9NV64 488 aa18.53■□□□□ 0.56
SMPD4-220ENST00000491319 CYP39A1Q9NYL5 469 aa18.53■□□□□ 0.56
SMPD4-220ENST00000491319 NEDD4P46934 1319 aa18.52■□□□□ 0.56
SMPD4-220ENST00000491319 ASB14A6NK59 587 aa18.52■□□□□ 0.56
SMPD4-220ENST00000491319 ICAM1P05362 532 aa18.52■□□□□ 0.56
SMPD4-220ENST00000491319 PTGS1P23219 599 aa18.52■□□□□ 0.56
SMPD4-220ENST00000491319 EPHB4P54760 987 aa18.52■□□□□ 0.56
SMPD4-220ENST00000491319 NUCB1Q02818 461 aa18.52■□□□□ 0.56
SMPD4-220ENST00000491319 AKNAD1Q5T1N1 836 aa18.52■□□□□ 0.56
SMPD4-220ENST00000491319 SYDE2Q5VT97 1194 aa18.52■□□□□ 0.56
SMPD4-220ENST00000491319 FAM109BQ6ICB4 259 aaPredicted RBP18.52■□□□□ 0.56
SMPD4-220ENST00000491319 BTNL9Q6UXG8 535 aa18.52■□□□□ 0.56
SMPD4-220ENST00000491319 FAM161BQ96MY7 647 aa18.52■□□□□ 0.56
SMPD4-220ENST00000491319 TOX2Q96NM4 488 aa18.52■□□□□ 0.56
SMPD4-220ENST00000491319 GUCD1Q96NT3 240 aa18.52■□□□□ 0.56
SMPD4-220ENST00000491319 PURBQ96QR8 312 aaKnown RBP18.52■□□□□ 0.56
SMPD4-220ENST00000491319 GPCPD1Q9NPB8 672 aa18.52■□□□□ 0.56
SMPD4-220ENST00000491319 ELP1O95163 1332 aa18.51■□□□□ 0.55
SMPD4-220ENST00000491319 DCDC2CA8MYV0 355 aa18.51■□□□□ 0.55
SMPD4-220ENST00000491319 PDHBP11177 359 aa18.51■□□□□ 0.55
SMPD4-220ENST00000491319 BEX3Q00994 111 aa18.51■□□□□ 0.55
SMPD4-220ENST00000491319 TNFAIP2Q03169 654 aa18.51■□□□□ 0.55
SMPD4-220ENST00000491319 GNASQ5JWF2 1037 aa18.51■□□□□ 0.55
SMPD4-220ENST00000491319 MFSD6Q6ZSS7 791 aa18.51■□□□□ 0.55
SMPD4-220ENST00000491319 FBXO16Q8IX29 292 aaPredicted RBP18.51■□□□□ 0.55
SMPD4-220ENST00000491319 OSBPL3Q9H4L5 887 aa18.51■□□□□ 0.55
SMPD4-220ENST00000491319 GBF1Q92538 1859 aa18.51■□□□□ 0.55
SMPD4-220ENST00000491319 MROH7Q68CQ1 1323 aa18.5■□□□□ 0.55
SMPD4-220ENST00000491319 NFIBO00712 420 aa18.5■□□□□ 0.55
SMPD4-220ENST00000491319 MFAP1P55081 439 aaKnown RBP18.5■□□□□ 0.55
SMPD4-220ENST00000491319 FPGSQ05932 587 aa18.5■□□□□ 0.55
SMPD4-220ENST00000491319 ZNF697Q5TEC3 545 aa18.5■□□□□ 0.55
SMPD4-220ENST00000491319 CWC27Q6UX04 472 aaKnown RBP18.5■□□□□ 0.55
SMPD4-220ENST00000491319 NOL8Q76FK4 1167 aaKnown RBP18.5■□□□□ 0.55
SMPD4-220ENST00000491319 EEPD1Q7L9B9 569 aa18.5■□□□□ 0.55
SMPD4-220ENST00000491319 TLK2Q86UE8 772 aa18.5■□□□□ 0.55
SMPD4-220ENST00000491319 VTI1AQ96AJ9 217 aa18.5■□□□□ 0.55
SMPD4-220ENST00000491319 PDGFCQ9NRA1 345 aa18.5■□□□□ 0.55
SMPD4-220ENST00000491319 TBX21Q9UL17 535 aa18.5■□□□□ 0.55
SMPD4-220ENST00000491319 GNEQ9Y223 722 aaKnown RBP18.5■□□□□ 0.55
SMPD4-220ENST00000491319 A0A0U1RQG5 324 aaPredicted RBP18.49■□□□□ 0.55
SMPD4-220ENST00000491319 PCP11498 1178 aaKnown RBP18.49■□□□□ 0.55
SMPD4-220ENST00000491319 CDK7P50613 346 aa18.49■□□□□ 0.55
SMPD4-220ENST00000491319 NKX3-2P78367 333 aa18.49■□□□□ 0.55
SMPD4-220ENST00000491319 ZNF543Q08ER8 600 aa18.49■□□□□ 0.55
SMPD4-220ENST00000491319 RNPC3Q96LT9 517 aaKnown RBP18.49■□□□□ 0.55
SMPD4-220ENST00000491319 ZKSCAN3Q9BRR0 538 aa18.49■□□□□ 0.55
SMPD4-220ENST00000491319 CDH23Q9H251 3354 aa18.49■□□□□ 0.55
SMPD4-220ENST00000491319 KIAA1217Q5T5P2 1943 aa18.49■□□□□ 0.55
SMPD4-220ENST00000491319 ARVCFO00192 962 aa18.48■□□□□ 0.55
SMPD4-220ENST00000491319 SMPD1P17405 629 aa18.48■□□□□ 0.55
SMPD4-220ENST00000491319 BAATQ14032 418 aaPredicted RBP18.48■□□□□ 0.55
SMPD4-220ENST00000491319 TMEM63BQ5T3F8 832 aa18.48■□□□□ 0.55
SMPD4-220ENST00000491319 TAPT1Q6NXT6 567 aa18.48■□□□□ 0.55
SMPD4-220ENST00000491319 RNF41Q9H4P4 317 aaPredicted RBP18.48■□□□□ 0.55
SMPD4-220ENST00000491319 DIAPH3Q9NSV4 1193 aa18.48■□□□□ 0.55
SMPD4-220ENST00000491319 PTPDC1A2A3K4 754 aa18.47■□□□□ 0.55
SMPD4-220ENST00000491319 TIMP1P01033 207 aa18.47■□□□□ 0.55
SMPD4-220ENST00000491319 SNHG28P0DPA3 235 aa18.47■□□□□ 0.55
SMPD4-220ENST00000491319 ALDH5A1P51649 535 aaPredicted RBP18.47■□□□□ 0.55
SMPD4-220ENST00000491319 SMAD3P84022 425 aaKnown RBP18.47■□□□□ 0.55
SMPD4-220ENST00000491319 FSCN1Q16658 493 aaKnown RBP18.47■□□□□ 0.55
SMPD4-220ENST00000491319 CXCL17Q6UXB2 119 aa18.47■□□□□ 0.55
SMPD4-220ENST00000491319 SLC30A10Q6XR72 485 aa18.47■□□□□ 0.55
SMPD4-220ENST00000491319 FAM126BQ8IXS8 530 aa18.47■□□□□ 0.55
SMPD4-220ENST00000491319 MORC4Q8TE76 937 aa18.47■□□□□ 0.55
SMPD4-220ENST00000491319 ESR2Q92731 530 aa18.47■□□□□ 0.55
SMPD4-220ENST00000491319 TTC14Q96N46 770 aa18.47■□□□□ 0.55
SMPD4-220ENST00000491319 ZNF213O14771 459 aa18.46■□□□□ 0.55
SMPD4-220ENST00000491319 CLEC4DQ8WXI8 215 aa18.46■□□□□ 0.55
SMPD4-220ENST00000491319 AP5M1Q9H0R1 490 aa18.46■□□□□ 0.55
SMPD4-220ENST00000491319 VTA1Q9NP79 307 aa18.46■□□□□ 0.55
SMPD4-220ENST00000491319 MYO9BQ13459 2157 aa18.46■□□□□ 0.55
SMPD4-220ENST00000491319 SCN10AQ9Y5Y9 1956 aa18.46■□□□□ 0.55
SMPD4-220ENST00000491319 EYSQ5T1H1 3165 aa18.46■□□□□ 0.55
SMPD4-220ENST00000491319 DYNC1LI2O43237 492 aaPredicted RBP18.45■□□□□ 0.54
SMPD4-220ENST00000491319 KDM4AO75164 1064 aa18.45■□□□□ 0.54
SMPD4-220ENST00000491319 GOLGA8HP0CJ92 632 aa18.45■□□□□ 0.54
SMPD4-220ENST00000491319 CALML3P27482 149 aa18.45■□□□□ 0.54
SMPD4-220ENST00000491319 IQSEC1Q6DN90 963 aa18.45■□□□□ 0.54
SMPD4-220ENST00000491319 PPP1R12CQ9BZL4 782 aa18.45■□□□□ 0.54
SMPD4-220ENST00000491319 TTYH1Q9H313 450 aaPredicted RBP18.45■□□□□ 0.54
SMPD4-220ENST00000491319 CPVLQ9H3G5 476 aa18.45■□□□□ 0.54
SMPD4-220ENST00000491319 ADD3Q9UEY8 706 aaKnown RBP18.45■□□□□ 0.54
SMPD4-220ENST00000491319 WDR19Q8NEZ3 1342 aa18.45■□□□□ 0.54
SMPD4-220ENST00000491319 SCN5AQ14524 2016 aa18.44■□□□□ 0.54
SMPD4-220ENST00000491319 UNC80Q8N2C7 3258 aa18.44■□□□□ 0.54
SMPD4-220ENST00000491319 B4E1Z4 1266 aa18.44■□□□□ 0.54
SMPD4-220ENST00000491319 TLR3O15455 904 aaKnown RBP18.44■□□□□ 0.54
SMPD4-220ENST00000491319 MFSD5Q6N075 450 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms