RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 CPXCR1Q8N123 301 aa15.86■□□□□ 0.13
SMPD4-219ENST00000491128 WNK4Q96J92 1243 aa15.86■□□□□ 0.13
SMPD4-219ENST00000491128 FUCA2Q9BTY2 467 aa15.86■□□□□ 0.13
SMPD4-219ENST00000491128 AMNQ9BXJ7 453 aa15.86■□□□□ 0.13
SMPD4-219ENST00000491128 RIC8AQ9NPQ8 531 aa15.86■□□□□ 0.13
SMPD4-219ENST00000491128 PICK1Q9NRD5 415 aa15.86■□□□□ 0.13
SMPD4-219ENST00000491128 EMILIN3Q9NT22 766 aa15.86■□□□□ 0.13
SMPD4-219ENST00000491128 USP2O75604 605 aaPredicted RBP15.86■□□□□ 0.13
SMPD4-219ENST00000491128 ATP2C1P98194 919 aaPredicted RBP15.86■□□□□ 0.13
SMPD4-219ENST00000491128 SCYL3Q8IZE3 742 aa15.86■□□□□ 0.13
SMPD4-219ENST00000491128 C4orf32Q8N8J7 132 aa15.86■□□□□ 0.13
SMPD4-219ENST00000491128 SYMPKQ92797 1274 aaKnown RBP15.86■□□□□ 0.13
SMPD4-219ENST00000491128 CUL5Q93034 780 aa15.86■□□□□ 0.13
SMPD4-219ENST00000491128 PLIN2Q99541 437 aa15.86■□□□□ 0.13
SMPD4-219ENST00000491128 OPLAHO14841 1288 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 MRE11P49959 708 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 TYRO3Q06418 890 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 POTEDQ86YR6 584 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 STAMQ92783 540 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 AGBL1Q96MI9 1066 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 HPSEQ9Y251 543 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 SLC37A4O43826 429 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 VCAM1P19320 739 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 CASP1P29466 404 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 GALNT17Q6IS24 598 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 KRT25Q7Z3Z0 450 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 HOMER2Q9NSB8 354 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 SMCHD1A6NHR9 2005 aa15.85■□□□□ 0.13
SMPD4-219ENST00000491128 GLTPD2A6NH11 291 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 POTECB2RU33 542 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 MEIS2O14770 477 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 PEX10O60683 326 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 FLOT1O75955 427 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 PNOCQ13519 176 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 BTNL9Q6UXG8 535 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 NEK8Q86SG6 692 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 FCHSD1Q86WN1 690 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 CLMNQ96JQ2 1002 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 CFBP00751 764 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 UBXN2AP68543 259 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 VGLL4Q14135 290 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-219ENST00000491128 DHX58Q96C10 678 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 DNAJC25Q9H1X3 360 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 RPAP3Q9H6T3 665 aaPredicted RBP15.84■□□□□ 0.13
SMPD4-219ENST00000491128 SH2D4AQ9H788 454 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 RTN4Q9NQC3 1192 aaKnown RBP15.84■□□□□ 0.13
SMPD4-219ENST00000491128 SERTAD1Q9UHV2 236 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 ZNF112Q9UJU3 913 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 CLEC11AQ9Y240 323 aa15.84■□□□□ 0.13
SMPD4-219ENST00000491128 ESYT2A0FGR8 921 aa15.83■□□□□ 0.13
SMPD4-219ENST00000491128 TRAPPC10P48553 1259 aa15.83■□□□□ 0.13
SMPD4-219ENST00000491128 MRPL12P52815 198 aaKnown RBP15.83■□□□□ 0.13
SMPD4-219ENST00000491128 TTLL12Q14166 644 aaPredicted RBP15.83■□□□□ 0.13
SMPD4-219ENST00000491128 SUPT20HL1Q3ZLR7 823 aa15.83■□□□□ 0.13
SMPD4-219ENST00000491128 ANO6Q4KMQ2 910 aa15.83■□□□□ 0.13
SMPD4-219ENST00000491128 ZNF280CQ8ND82 737 aa15.83■□□□□ 0.13
SMPD4-219ENST00000491128 ZNF408Q9H9D4 720 aa15.83■□□□□ 0.13
SMPD4-219ENST00000491128 DICER1Q9UPY3 1922 aaKnown RBP15.83■□□□□ 0.13
SMPD4-219ENST00000491128 LETM1O95202 739 aaPredicted RBP15.83■□□□□ 0.12
SMPD4-219ENST00000491128 CLK2P49760 499 aaKnown RBP15.83■□□□□ 0.12
SMPD4-219ENST00000491128 L1TD1Q5T7N2 865 aaKnown RBP15.83■□□□□ 0.12
SMPD4-219ENST00000491128 ZNF526Q8TF50 670 aaPredicted RBP15.83■□□□□ 0.12
SMPD4-219ENST00000491128 KIAA1683Q9H0B3 1180 aa15.83■□□□□ 0.12
SMPD4-219ENST00000491128 CCDC192P0DO97 292 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 BACE1P56817 501 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 PLCB2Q00722 1185 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 MAP1SQ66K74 1059 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-219ENST00000491128 SASS6Q6UVJ0 657 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 CNNM3Q8NE01 707 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 CHURC1Q8WUH1 139 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 RAVER2Q9HCJ3 691 aaKnown RBP15.82■□□□□ 0.12
SMPD4-219ENST00000491128 hCG_1984214I3L0E3 225 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 TRAF5O00463 557 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 PRR29P0C7W0 189 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 TECP42680 631 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 TXKP42681 527 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 AFMP43652 599 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 ZNF713Q8N859 430 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-219ENST00000491128 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.82■□□□□ 0.12
SMPD4-219ENST00000491128 TAF1DQ9H5J8 278 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-219ENST00000491128 FAM13BQ9NYF5 915 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 NEMFO60524 1076 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 SLC30A10Q6XR72 485 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 C11orf57Q6ZUT1 292 aaPredicted RBP15.82■□□□□ 0.12
SMPD4-219ENST00000491128 LUZP1Q86V48 1076 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 LDHDQ86WU2 507 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 ELP3Q9H9T3 547 aa15.82■□□□□ 0.12
SMPD4-219ENST00000491128 KARSQ15046 597 aaKnown RBP15.81■□□□□ 0.12
SMPD4-219ENST00000491128 RBM43Q6ZSC3 357 aaKnown RBP15.81■□□□□ 0.12
SMPD4-219ENST00000491128 CDCA5Q96FF9 252 aa15.81■□□□□ 0.12
SMPD4-219ENST00000491128 FEM1BQ9UK73 627 aa15.81■□□□□ 0.12
SMPD4-219ENST00000491128 SNCAIPQ9Y6H5 919 aa15.81■□□□□ 0.12
SMPD4-219ENST00000491128 GRIN3BO60391 1043 aa15.81■□□□□ 0.12
SMPD4-219ENST00000491128 DTHD1Q6ZMT9 781 aa15.81■□□□□ 0.12
SMPD4-219ENST00000491128 KRBA2Q6ZNG9 492 aa15.81■□□□□ 0.12
SMPD4-219ENST00000491128 CYP2W1Q8TAV3 490 aa15.81■□□□□ 0.12
SMPD4-219ENST00000491128 HOOK2Q96ED9 719 aa15.81■□□□□ 0.12
SMPD4-219ENST00000491128 L3MBTL3Q96JM7 780 aaPredicted RBP15.81■□□□□ 0.12
SMPD4-219ENST00000491128 SLF1Q9BQI6 1058 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms