RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 ALX1Q15699 326 aa19.66■□□□□ 0.74
SRGAP3-209ENST00000490889 TKFCQ3LXA3 575 aa19.66■□□□□ 0.74
SRGAP3-209ENST00000490889 TMEM63BQ5T3F8 832 aa19.66■□□□□ 0.74
SRGAP3-209ENST00000490889 TTBK2Q6IQ55 1244 aa19.66■□□□□ 0.74
SRGAP3-209ENST00000490889 FAM126BQ8IXS8 530 aa19.66■□□□□ 0.74
SRGAP3-209ENST00000490889 HELLSQ9NRZ9 838 aa19.66■□□□□ 0.74
SRGAP3-209ENST00000490889 CYP39A1Q9NYL5 469 aa19.66■□□□□ 0.74
SRGAP3-209ENST00000490889 GNEQ9Y223 722 aaKnown RBP19.66■□□□□ 0.74
SRGAP3-209ENST00000490889 A0A0U1RQG5 324 aaPredicted RBP19.65■□□□□ 0.74
SRGAP3-209ENST00000490889 SLC16A2P36021 539 aa19.65■□□□□ 0.74
SRGAP3-209ENST00000490889 TNFAIP2Q03169 654 aa19.65■□□□□ 0.74
SRGAP3-209ENST00000490889 PPP4R3BQ5MIZ7 849 aa19.65■□□□□ 0.74
SRGAP3-209ENST00000490889 C16orf59Q7L2K0 433 aa19.65■□□□□ 0.74
SRGAP3-209ENST00000490889 ZNF589Q86UQ0 364 aaPredicted RBP19.65■□□□□ 0.74
SRGAP3-209ENST00000490889 VTI1AQ96AJ9 217 aa19.65■□□□□ 0.74
SRGAP3-209ENST00000490889 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.65■□□□□ 0.74
SRGAP3-209ENST00000490889 COL25A1Q9BXS0 654 aaPredicted RBP19.65■□□□□ 0.74
SRGAP3-209ENST00000490889 PDGFCQ9NRA1 345 aa19.65■□□□□ 0.74
SRGAP3-209ENST00000490889 SPTBN5Q9NRC6 3674 aaKnown RBP19.64■□□□□ 0.73
SRGAP3-209ENST00000490889 ASB14A6NK59 587 aa19.64■□□□□ 0.73
SRGAP3-209ENST00000490889 FGAP02671 866 aa19.64■□□□□ 0.73
SRGAP3-209ENST00000490889 SMPD1P17405 629 aa19.64■□□□□ 0.73
SRGAP3-209ENST00000490889 CCDC96Q2M329 555 aa19.64■□□□□ 0.73
SRGAP3-209ENST00000490889 MFSD5Q6N075 450 aa19.64■□□□□ 0.73
SRGAP3-209ENST00000490889 TAPT1Q6NXT6 567 aa19.64■□□□□ 0.73
SRGAP3-209ENST00000490889 CXCL17Q6UXB2 119 aa19.64■□□□□ 0.73
SRGAP3-209ENST00000490889 FBXO16Q8IX29 292 aaPredicted RBP19.64■□□□□ 0.73
SRGAP3-209ENST00000490889 RANBP17Q9H2T7 1088 aaKnown RBP19.64■□□□□ 0.73
SRGAP3-209ENST00000490889 CCPG1Q9ULG6 757 aa19.64■□□□□ 0.73
SRGAP3-209ENST00000490889 MROH7Q68CQ1 1323 aa19.64■□□□□ 0.73
SRGAP3-209ENST00000490889 CHD9Q3L8U1 2897 aa19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 ICAM1P05362 532 aa19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 HDAC1Q13547 482 aaPredicted RBP19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 RRP12Q5JTH9 1297 aaKnown RBP19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 NSMFQ6X4W1 530 aa19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 NOL8Q76FK4 1167 aaKnown RBP19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 EEPD1Q7L9B9 569 aa19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 TLK2Q86UE8 772 aa19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 MAFAQ8NHW3 353 aaPredicted RBP19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 DCAF4Q8WV16 495 aa19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 TMEM47Q9BQJ4 181 aa19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 PPP1R12CQ9BZL4 782 aa19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 TOMM22Q9NS69 142 aa19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 ZBTB47Q9UFB7 747 aaPredicted RBP19.63■□□□□ 0.73
SRGAP3-209ENST00000490889 GRIN2DO15399 1336 aa19.62■□□□□ 0.73
SRGAP3-209ENST00000490889 FRMPD2Q68DX3 1309 aaPredicted RBP19.62■□□□□ 0.73
SRGAP3-209ENST00000490889 CD4P01730 458 aa19.62■□□□□ 0.73
SRGAP3-209ENST00000490889 HSPD1P10809 573 aaKnown RBP19.62■□□□□ 0.73
SRGAP3-209ENST00000490889 CSF2RAP15509 400 aa19.62■□□□□ 0.73
SRGAP3-209ENST00000490889 NMIQ13287 307 aaPredicted RBP19.62■□□□□ 0.73
SRGAP3-209ENST00000490889 MCMDC2Q4G0Z9 681 aa19.62■□□□□ 0.73
SRGAP3-209ENST00000490889 TMEM240Q5SV17 173 aa19.62■□□□□ 0.73
SRGAP3-209ENST00000490889 BTNL9Q6UXG8 535 aa19.62■□□□□ 0.73
SRGAP3-209ENST00000490889 NFIBO00712 420 aa19.61■□□□□ 0.73
SRGAP3-209ENST00000490889 DYNC1LI2O43237 492 aaPredicted RBP19.61■□□□□ 0.73
SRGAP3-209ENST00000490889 ACRP10323 421 aa19.61■□□□□ 0.73
SRGAP3-209ENST00000490889 DNAJB2P25686 324 aa19.61■□□□□ 0.73
SRGAP3-209ENST00000490889 HAND2P61296 217 aa19.61■□□□□ 0.73
SRGAP3-209ENST00000490889 FSCN1Q16658 493 aaKnown RBP19.61■□□□□ 0.73
SRGAP3-209ENST00000490889 SLC43A3Q8NBI5 491 aa19.61■□□□□ 0.73
SRGAP3-209ENST00000490889 MORC4Q8TE76 937 aa19.61■□□□□ 0.73
SRGAP3-209ENST00000490889 LNPKQ9C0E8 428 aa19.61■□□□□ 0.73
SRGAP3-209ENST00000490889 GPCPD1Q9NPB8 672 aa19.61■□□□□ 0.73
SRGAP3-209ENST00000490889 ZMYM6O95789 1325 aa19.6■□□□□ 0.73
SRGAP3-209ENST00000490889 UMODL1Q5DID0 1318 aa19.6■□□□□ 0.73
SRGAP3-209ENST00000490889 TMEM265A0A087WTH1 108 aa19.6■□□□□ 0.73
SRGAP3-209ENST00000490889 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.6■□□□□ 0.73
SRGAP3-209ENST00000490889 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.6■□□□□ 0.73
SRGAP3-209ENST00000490889 TOP1P11387 765 aaKnown RBP19.6■□□□□ 0.73
SRGAP3-209ENST00000490889 CYP2C18P33260 490 aa19.6■□□□□ 0.73
SRGAP3-209ENST00000490889 PPIGQ13427 754 aaKnown RBP eCLIP19.6■□□□□ 0.73
SRGAP3-209ENST00000490889 BAATQ14032 418 aaPredicted RBP19.6■□□□□ 0.73
SRGAP3-209ENST00000490889 GRIN2CQ14957 1233 aa19.6■□□□□ 0.73
SRGAP3-209ENST00000490889 RASIP1Q5U651 963 aa19.6■□□□□ 0.73
SRGAP3-209ENST00000490889 SYDE2Q5VT97 1194 aa19.6■□□□□ 0.73
SRGAP3-209ENST00000490889 TCP11L1Q9NUJ3 509 aa19.6■□□□□ 0.73
SRGAP3-209ENST00000490889 GRXCR1A8MXD5 290 aa19.59■□□□□ 0.73
SRGAP3-209ENST00000490889 TLR3O15455 904 aaKnown RBP19.59■□□□□ 0.73
SRGAP3-209ENST00000490889 PDHBP11177 359 aa19.59■□□□□ 0.73
SRGAP3-209ENST00000490889 FOSL2P15408 326 aa19.59■□□□□ 0.73
SRGAP3-209ENST00000490889 ITGA7Q13683 1181 aa19.59■□□□□ 0.73
SRGAP3-209ENST00000490889 TBC1D10CQ8IV04 446 aa19.59■□□□□ 0.73
SRGAP3-209ENST00000490889 CCDC171Q6TFL3 1326 aa19.58■□□□□ 0.73
SRGAP3-209ENST00000490889 PBX2P40425 430 aa19.58■□□□□ 0.72
SRGAP3-209ENST00000490889 ALDH5A1P51649 535 aaPredicted RBP19.58■□□□□ 0.72
SRGAP3-209ENST00000490889 PSMC6P62333 389 aa19.58■□□□□ 0.72
SRGAP3-209ENST00000490889 IQSEC1Q6DN90 963 aa19.58■□□□□ 0.72
SRGAP3-209ENST00000490889 SLC30A10Q6XR72 485 aa19.58■□□□□ 0.72
SRGAP3-209ENST00000490889 KIAA1211Q6ZU35 1233 aa19.58■□□□□ 0.72
SRGAP3-209ENST00000490889 ZNF365Q70YC5 407 aa19.58■□□□□ 0.72
SRGAP3-209ENST00000490889 TMEM199Q8N511 208 aa19.58■□□□□ 0.72
SRGAP3-209ENST00000490889 CLEC4DQ8WXI8 215 aa19.58■□□□□ 0.72
SRGAP3-209ENST00000490889 AP5M1Q9H0R1 490 aa19.58■□□□□ 0.72
SRGAP3-209ENST00000490889 VTA1Q9NP79 307 aa19.58■□□□□ 0.72
SRGAP3-209ENST00000490889 TRIM6-TRIM34B2RNG4 842 aa19.57■□□□□ 0.72
SRGAP3-209ENST00000490889 CABYRO75952 493 aa19.57■□□□□ 0.72
SRGAP3-209ENST00000490889 TIFAQ96CG3 184 aa19.57■□□□□ 0.72
SRGAP3-209ENST00000490889 PBX4Q9BYU1 374 aa19.57■□□□□ 0.72
SRGAP3-209ENST00000490889 TRPV6Q9H1D0 765 aa19.57■□□□□ 0.72
SRGAP3-209ENST00000490889 Q9Y3F1 56 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms