RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 PLS1Q14651 629 aa10.93□□□□□ -0.66
SRRM1-217ENST00000490543 SKIV2LQ15477 1246 aaKnown RBP10.93□□□□□ -0.66
SRRM1-217ENST00000490543 TTC6Q86TZ1 520 aa10.93□□□□□ -0.66
SRRM1-217ENST00000490543 SHCBP1Q8NEM2 672 aa10.93□□□□□ -0.66
SRRM1-217ENST00000490543 CLUAP1Q96AJ1 413 aa10.93□□□□□ -0.66
SRRM1-217ENST00000490543 MAML3Q96JK9 1138 aa10.93□□□□□ -0.66
SRRM1-217ENST00000490543 TANGO6Q9C0B7 1094 aa10.93□□□□□ -0.66
SRRM1-217ENST00000490543 CCDC8Q9H0W5 538 aaPredicted RBP10.93□□□□□ -0.66
SRRM1-217ENST00000490543 HOXC10Q9NYD6 342 aa10.93□□□□□ -0.66
SRRM1-217ENST00000490543 PHF24Q9UPV7 400 aa10.93□□□□□ -0.66
SRRM1-217ENST00000490543 TACC3Q9Y6A5 838 aa10.93□□□□□ -0.66
SRRM1-217ENST00000490543 KIAA0355O15063 1070 aa10.92□□□□□ -0.66
SRRM1-217ENST00000490543 SURF6O75683 361 aaKnown RBP10.92□□□□□ -0.66
SRRM1-217ENST00000490543 BCAR3O75815 825 aa10.92□□□□□ -0.66
SRRM1-217ENST00000490543 PGK1P00558 417 aa10.92□□□□□ -0.66
SRRM1-217ENST00000490543 CLTBP09497 229 aa10.92□□□□□ -0.66
SRRM1-217ENST00000490543 TAL1P17542 331 aaPredicted RBP10.92□□□□□ -0.66
SRRM1-217ENST00000490543 GABPAQ06546 454 aa10.92□□□□□ -0.66
SRRM1-217ENST00000490543 OS9Q13438 667 aaPredicted RBP10.92□□□□□ -0.66
SRRM1-217ENST00000490543 NCAPG2Q86XI2 1143 aa10.92□□□□□ -0.66
SRRM1-217ENST00000490543 SSH3Q8TE77 659 aa10.92□□□□□ -0.66
SRRM1-217ENST00000490543 EAF2Q96CJ1 260 aaPredicted RBP10.92□□□□□ -0.66
SRRM1-217ENST00000490543 ATG4CQ96DT6 458 aa10.92□□□□□ -0.66
SRRM1-217ENST00000490543 TMEM265A0A087WTH1 108 aa10.91□□□□□ -0.66
SRRM1-217ENST00000490543 MPHOSPH10O00566 681 aaKnown RBP10.91□□□□□ -0.66
SRRM1-217ENST00000490543 PQBP1O60828 265 aaKnown RBP10.91□□□□□ -0.66
SRRM1-217ENST00000490543 PGK2P07205 417 aa10.91□□□□□ -0.66
SRRM1-217ENST00000490543 RAG1P15918 1043 aa10.91□□□□□ -0.66
SRRM1-217ENST00000490543 VARSP26640 1264 aaKnown RBP10.91□□□□□ -0.66
SRRM1-217ENST00000490543 ATP8B2P98198 1209 aa10.91□□□□□ -0.66
SRRM1-217ENST00000490543 CLEC10AQ8IUN9 316 aa10.91□□□□□ -0.66
SRRM1-217ENST00000490543 SIAH1Q8IUQ4 282 aa10.91□□□□□ -0.66
SRRM1-217ENST00000490543 SPICE1Q8N0Z3 855 aa10.91□□□□□ -0.66
SRRM1-217ENST00000490543 LENG1Q96BZ8 264 aaPredicted RBP10.91□□□□□ -0.66
SRRM1-217ENST00000490543 RIOK1Q9BRS2 568 aaKnown RBP10.91□□□□□ -0.66
SRRM1-217ENST00000490543 MROH8Q9H579 483 aa10.91□□□□□ -0.66
SRRM1-217ENST00000490543 ZNF576Q9H609 170 aa10.91□□□□□ -0.66
SRRM1-217ENST00000490543 XPNPEP3Q9NQH7 507 aa10.91□□□□□ -0.66
SRRM1-217ENST00000490543 GMPR2Q9P2T1 348 aaKnown RBP10.91□□□□□ -0.66
SRRM1-217ENST00000490543 ZNFX1Q9P2E3 1918 aaKnown RBP10.91□□□□□ -0.66
SRRM1-217ENST00000490543 ZNF236Q9UL36 1845 aa10.91□□□□□ -0.66
SRRM1-217ENST00000490543 MUC3AQ02505 3323 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.9□□□□□ -0.66
SRRM1-217ENST00000490543 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.9□□□□□ -0.66
SRRM1-217ENST00000490543 A0A1W2PQ45 241 aaPredicted RBP10.9□□□□□ -0.66
SRRM1-217ENST00000490543 A0A1W2PQY0 241 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 GRXCR1A8MXD5 290 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 IGSF3O75054 1194 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 FLOT1O75955 427 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 POLR3DP05423 398 aaPredicted RBP10.9□□□□□ -0.66
SRRM1-217ENST00000490543 CYP2D6P10635 497 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 RARBP10826 455 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 FPGSQ05932 587 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 FAAP100Q0VG06 881 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 C16orf59Q7L2K0 433 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 ABRAQ8N0Z2 381 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 SLC44A5Q8NCS7 719 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 PPM1EQ8WY54 764 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 FRAT1Q92837 279 aaPredicted RBP10.9□□□□□ -0.66
SRRM1-217ENST00000490543 ZNF775Q96BV0 537 aaPredicted RBP10.9□□□□□ -0.66
SRRM1-217ENST00000490543 C1orf115Q9H7X2 142 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 TMEM39AQ9NV64 488 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 SLC5A4Q9NY91 659 aa10.9□□□□□ -0.66
SRRM1-217ENST00000490543 SMIM22K7EJ46 135 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 ZNF865P0CJ78 1059 aaPredicted RBP10.89□□□□□ -0.67
SRRM1-217ENST00000490543 FCER1AP12319 257 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 MAP3K12Q12852 859 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 TMEM132BQ14DG7 1078 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 CERS3Q8IU89 383 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 TMEM57Q8N5G2 664 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 MB21D1Q8N884 522 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 FOXJ1Q92949 421 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 TIFAQ96CG3 184 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 DYNLL2Q96FJ2 89 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.89□□□□□ -0.672e-23■■■■□ 20.2
SRRM1-217ENST00000490543 TINF2Q9BSI4 451 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.89□□□□□ -0.67
SRRM1-217ENST00000490543 MCM9Q9NXL9 1143 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 NOP58Q9Y2X3 529 aaKnown RBP10.89□□□□□ -0.67
SRRM1-217ENST00000490543 WASF2Q9Y6W5 498 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 BDP1A6H8Y1 2624 aa10.89□□□□□ -0.67
SRRM1-217ENST00000490543 A0A0G2JMZ2 1700 aa10.88□□□□□ -0.67
SRRM1-217ENST00000490543 MAGEB6P1A0A0J9YX57 407 aa10.88□□□□□ -0.67
SRRM1-217ENST00000490543 IPO8O15397 1037 aaKnown RBP10.88□□□□□ -0.67
SRRM1-217ENST00000490543 ADAMTS4O75173 837 aa10.88□□□□□ -0.67
SRRM1-217ENST00000490543 AKR1B1P15121 316 aa10.88□□□□□ -0.67
SRRM1-217ENST00000490543 ZNF792Q3KQV3 632 aa10.88□□□□□ -0.67
SRRM1-217ENST00000490543 ANKRD33Q7Z3H0 272 aa10.88□□□□□ -0.67
SRRM1-217ENST00000490543 RNF180Q86T96 592 aa10.88□□□□□ -0.67
SRRM1-217ENST00000490543 SDR42E1Q8WUS8 393 aa10.88□□□□□ -0.67
SRRM1-217ENST00000490543 FBXO28Q9NVF7 368 aa10.88□□□□□ -0.67
SRRM1-217ENST00000490543 TIMP1P01033 207 aa10.87□□□□□ -0.67
SRRM1-217ENST00000490543 ACLYP53396 1101 aa10.87□□□□□ -0.67
SRRM1-217ENST00000490543 CTDSPL2Q05D32 466 aa10.87□□□□□ -0.67
SRRM1-217ENST00000490543 TMEM179Q6ZVK1 233 aa10.87□□□□□ -0.67
SRRM1-217ENST00000490543 TOX2Q96NM4 488 aa10.87□□□□□ -0.67
SRRM1-217ENST00000490543 MMP19Q99542 508 aa10.87□□□□□ -0.67
SRRM1-217ENST00000490543 PBX4Q9BYU1 374 aa10.87□□□□□ -0.67
SRRM1-217ENST00000490543 PRDM12Q9H4Q4 367 aa10.87□□□□□ -0.67
SRRM1-217ENST00000490543 VCPKMTQ9H867 229 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms