RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 MRPS5P82675 430 aaKnown RBP9.82□□□□□ -0.84
USP39-216ENST00000490193 GNASQ5JWF2 1037 aa9.82□□□□□ -0.84
USP39-216ENST00000490193 ZSCAN25Q6NSZ9 544 aa9.82□□□□□ -0.84
USP39-216ENST00000490193 GIMAP6Q6P9H5 292 aa9.82□□□□□ -0.84
USP39-216ENST00000490193 CCDC129Q6ZRS4 1044 aa9.82□□□□□ -0.84
USP39-216ENST00000490193 CHST13Q8NET6 341 aa9.82□□□□□ -0.84
USP39-216ENST00000490193 ADAMTS19Q8TE59 1207 aa9.82□□□□□ -0.84
USP39-216ENST00000490193 MKL1Q969V6 931 aa9.82□□□□□ -0.84
USP39-216ENST00000490193 NUP88Q99567 741 aaPredicted RBP9.82□□□□□ -0.84
USP39-216ENST00000490193 MTIF3Q9H2K0 278 aaKnown RBP9.82□□□□□ -0.84
USP39-216ENST00000490193 BOLA2Q9H3K6 86 aa9.82□□□□□ -0.84
USP39-216ENST00000490193 MSRAQ9UJ68 235 aa9.82□□□□□ -0.84
USP39-216ENST00000490193 SLC4A4Q9Y6R1 1079 aa9.82□□□□□ -0.84
USP39-216ENST00000490193 RAD21O60216 631 aa9.81□□□□□ -0.84
USP39-216ENST00000490193 HMMRO75330 724 aa9.81□□□□□ -0.84
USP39-216ENST00000490193 CABYRO75952 493 aa9.81□□□□□ -0.84
USP39-216ENST00000490193 CHGBP05060 677 aa9.81□□□□□ -0.84
USP39-216ENST00000490193 FDX1P10109 184 aa9.81□□□□□ -0.84
USP39-216ENST00000490193 ACRP10323 421 aa9.81□□□□□ -0.84
USP39-216ENST00000490193 ARMCX2Q7L311 632 aa9.81□□□□□ -0.84
USP39-216ENST00000490193 SIRT2Q8IXJ6 389 aa9.81□□□□□ -0.84
USP39-216ENST00000490193 ANKRD35Q8N283 1001 aa9.81□□□□□ -0.84
USP39-216ENST00000490193 PPP1R12CQ9BZL4 782 aa9.81□□□□□ -0.84
USP39-216ENST00000490193 PUS7LQ9H0K6 701 aaKnown RBP9.81□□□□□ -0.84
USP39-216ENST00000490193 ZSWIM6Q9HCJ5 1215 aa9.81□□□□□ -0.84
USP39-216ENST00000490193 CXXC1Q9P0U4 656 aaPredicted RBP9.81□□□□□ -0.84
USP39-216ENST00000490193 LCTP09848 1927 aa9.81□□□□□ -0.84
USP39-216ENST00000490193 ASTN1O14525 1302 aa9.81□□□□□ -0.84
USP39-216ENST00000490193 PLIN4Q96Q06 1357 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 FGBP02675 491 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 CYP2C18P33260 490 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 CCDC144CPQ8IYA2 1237 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 CPXCR1Q8N123 301 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 FAM133AQ8N9E0 248 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 GMCL1P1Q8NEA9 526 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 PANK1Q8TE04 598 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 PPM1EQ8WY54 764 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 VTI1AQ96AJ9 217 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 STRBPQ96SI9 672 aaKnown RBP9.8□□□□□ -0.84
USP39-216ENST00000490193 UHRF1Q96T88 793 aaPredicted RBP9.8□□□□□ -0.84
USP39-216ENST00000490193 NKX2-4Q9H2Z4 354 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 HIPK3Q9H422 1215 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 SLC28A3Q9HAS3 691 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 RAVER2Q9HCJ3 691 aaKnown RBP9.8□□□□□ -0.84
USP39-216ENST00000490193 FEM1BQ9UK73 627 aa9.8□□□□□ -0.84
USP39-216ENST00000490193 GNEQ9Y223 722 aaKnown RBP9.8□□□□□ -0.84
USP39-216ENST00000490193 YBX2Q9Y2T7 364 aaKnown RBP9.8□□□□□ -0.84
USP39-216ENST00000490193 TCF20Q9UGU0 1960 aaKnown RBP9.79□□□□□ -0.84
USP39-216ENST00000490193 GSG1L2A8MUP6 293 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 APBB1O00213 710 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 MS4A1P11836 297 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 TNFAIP2Q03169 654 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 KIFC2Q96AC6 838 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 NOC4LQ9BVI4 516 aaKnown RBP9.79□□□□□ -0.84
USP39-216ENST00000490193 ACAD9Q9H845 621 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 MKNK2Q9HBH9 465 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 ZBTB40Q9NUA8 1239 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 MTMR4Q9NYA4 1195 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 CLIP2Q9UDT6 1046 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 Q9Y3F1 56 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 CTDP1Q9Y5B0 961 aaPredicted RBP9.79□□□□□ -0.84
USP39-216ENST00000490193 GRIN2DO15399 1336 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 UMODL1Q5DID0 1318 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 TANC1Q9C0D5 1861 aa9.79□□□□□ -0.84
USP39-216ENST00000490193 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.78□□□□□ -0.84
USP39-216ENST00000490193 ASB14A6NK59 587 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 BMP1P13497 986 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 POU3F3P20264 500 aaPredicted RBP9.78□□□□□ -0.84
USP39-216ENST00000490193 IGFBP4P22692 258 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 BEX3Q00994 111 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 CNTN2Q02246 1040 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 ITGA7Q13683 1181 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 CCDC85BQ15834 202 aaPredicted RBP9.78□□□□□ -0.84
USP39-216ENST00000490193 FSCN1Q16658 493 aaKnown RBP9.78□□□□□ -0.84
USP39-216ENST00000490193 TKFCQ3LXA3 575 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 CXCL17Q6UXB2 119 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 TLK2Q86UE8 772 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 RPUSD2Q8IZ73 545 aaKnown RBP9.78□□□□□ -0.84
USP39-216ENST00000490193 ZNF687Q8N1G0 1237 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 VWCEQ96DN2 955 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 CEP95Q96GE4 821 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 WNT8AQ9H1J5 351 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 ZNF287Q9HBT7 754 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 A1CFQ9NQ94 594 aaKnown RBP9.78□□□□□ -0.84
USP39-216ENST00000490193 PCDHA11Q9Y5I1 949 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 ZNF536O15090 1300 aa9.78□□□□□ -0.84
USP39-216ENST00000490193 SOWAHBA6NEL2 793 aa9.77□□□□□ -0.85
USP39-216ENST00000490193 ZEB2O60315 1214 aa9.77□□□□□ -0.85
USP39-216ENST00000490193 B4GALT4O60513 344 aa9.77□□□□□ -0.85
USP39-216ENST00000490193 PLA2G6O60733 806 aa9.77□□□□□ -0.85
USP39-216ENST00000490193 TTLL1O95922 423 aa9.77□□□□□ -0.85
USP39-216ENST00000490193 PFKMP08237 780 aa9.77□□□□□ -0.85
USP39-216ENST00000490193 BMP3P12645 472 aa9.77□□□□□ -0.85
USP39-216ENST00000490193 SLC4A3P48751 1232 aa9.77□□□□□ -0.85
USP39-216ENST00000490193 AAK1Q2M2I8 961 aa9.77□□□□□ -0.85
USP39-216ENST00000490193 IQSEC1Q6DN90 963 aa9.77□□□□□ -0.85
USP39-216ENST00000490193 OTOP2Q7RTS6 562 aa9.77□□□□□ -0.85
USP39-216ENST00000490193 FAM160B2Q86V87 743 aa9.77□□□□□ -0.85
USP39-216ENST00000490193 KBTBD3Q8NAB2 608 aa9.77□□□□□ -0.85
USP39-216ENST00000490193 IL27Q8NEV9 243 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms