RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 NOL8Q76FK4 1167 aaKnown RBP18.82■□□□□ 0.6
PLOD3-216ENST00000489927 ZNF576Q9H609 170 aa18.82■□□□□ 0.6
PLOD3-216ENST00000489927 ASB14A6NK59 587 aa18.81■□□□□ 0.6
PLOD3-216ENST00000489927 TLR3O15455 904 aaKnown RBP18.81■□□□□ 0.6
PLOD3-216ENST00000489927 CD4P01730 458 aa18.81■□□□□ 0.6
PLOD3-216ENST00000489927 PTGS1P23219 599 aa18.81■□□□□ 0.6
PLOD3-216ENST00000489927 MUM1L1Q5H9M0 696 aa18.81■□□□□ 0.6
PLOD3-216ENST00000489927 PPP4R3BQ5MIZ7 849 aa18.81■□□□□ 0.6
PLOD3-216ENST00000489927 RASIP1Q5U651 963 aa18.81■□□□□ 0.6
PLOD3-216ENST00000489927 RCSD1Q6JBY9 416 aa18.81■□□□□ 0.6
PLOD3-216ENST00000489927 CXCL17Q6UXB2 119 aa18.81■□□□□ 0.6
PLOD3-216ENST00000489927 TLK2Q86UE8 772 aa18.81■□□□□ 0.6
PLOD3-216ENST00000489927 TMEM199Q8N511 208 aa18.81■□□□□ 0.6
PLOD3-216ENST00000489927 TIFAQ96CG3 184 aa18.81■□□□□ 0.6
PLOD3-216ENST00000489927 PRR12Q9ULL5 1215 aa18.81■□□□□ 0.6
PLOD3-216ENST00000489927 GNEQ9Y223 722 aaKnown RBP18.81■□□□□ 0.6
PLOD3-216ENST00000489927 GRXCR1A8MXD5 290 aa18.8■□□□□ 0.6
PLOD3-216ENST00000489927 ACRP10323 421 aa18.8■□□□□ 0.6
PLOD3-216ENST00000489927 PBX2P40425 430 aa18.8■□□□□ 0.6
PLOD3-216ENST00000489927 SLC43A3Q8NBI5 491 aa18.8■□□□□ 0.6
PLOD3-216ENST00000489927 PDGFCQ9NRA1 345 aa18.8■□□□□ 0.6
PLOD3-216ENST00000489927 CYP39A1Q9NYL5 469 aa18.8■□□□□ 0.6
PLOD3-216ENST00000489927 SALL3Q9BXA9 1300 aa18.79■□□□□ 0.6
PLOD3-216ENST00000489927 RANBP6O60518 1105 aaKnown RBP18.79■□□□□ 0.6
PLOD3-216ENST00000489927 SMPD1P17405 629 aa18.79■□□□□ 0.6
PLOD3-216ENST00000489927 CYP2C18P33260 490 aa18.79■□□□□ 0.6
PLOD3-216ENST00000489927 FSCN1Q16658 493 aaKnown RBP18.79■□□□□ 0.6
PLOD3-216ENST00000489927 VPS53Q5VIR6 699 aa18.79■□□□□ 0.6
PLOD3-216ENST00000489927 PSRC1Q6PGN9 363 aaPredicted RBP18.79■□□□□ 0.6
PLOD3-216ENST00000489927 ZNF365Q70YC5 407 aa18.79■□□□□ 0.6
PLOD3-216ENST00000489927 EEPD1Q7L9B9 569 aa18.79■□□□□ 0.6
PLOD3-216ENST00000489927 USP38Q8NB14 1042 aa18.79■□□□□ 0.6
PLOD3-216ENST00000489927 PBX4Q9BYU1 374 aa18.79■□□□□ 0.6
PLOD3-216ENST00000489927 MTMR7Q9Y216 660 aa18.79■□□□□ 0.6
PLOD3-216ENST00000489927 LRRC37A2A6NM11 1700 aa18.79■□□□□ 0.6
PLOD3-216ENST00000489927 DYNC1LI2O43237 492 aaPredicted RBP18.78■□□□□ 0.6
PLOD3-216ENST00000489927 TMEM63BQ5T3F8 832 aa18.78■□□□□ 0.6
PLOD3-216ENST00000489927 TAPT1Q6NXT6 567 aa18.78■□□□□ 0.6
PLOD3-216ENST00000489927 FBXO16Q8IX29 292 aaPredicted RBP18.78■□□□□ 0.6
PLOD3-216ENST00000489927 PURBQ96QR8 312 aaKnown RBP18.78■□□□□ 0.6
PLOD3-216ENST00000489927 AP5M1Q9H0R1 490 aa18.78■□□□□ 0.6
PLOD3-216ENST00000489927 ANAPC4Q9UJX5 808 aa18.78■□□□□ 0.6
PLOD3-216ENST00000489927 CCPG1Q9ULG6 757 aa18.78■□□□□ 0.6
PLOD3-216ENST00000489927 CHD9Q3L8U1 2897 aa18.78■□□□□ 0.6
PLOD3-216ENST00000489927 GRIN2DO15399 1336 aa18.77■□□□□ 0.6
PLOD3-216ENST00000489927 CABYRO75952 493 aa18.77■□□□□ 0.6
PLOD3-216ENST00000489927 NOVP48745 357 aa18.77■□□□□ 0.6
PLOD3-216ENST00000489927 ITGA7Q13683 1181 aa18.77■□□□□ 0.6
PLOD3-216ENST00000489927 CCDC96Q2M329 555 aa18.77■□□□□ 0.6
PLOD3-216ENST00000489927 IQSEC1Q6DN90 963 aa18.77■□□□□ 0.6
PLOD3-216ENST00000489927 NSMFQ6X4W1 530 aa18.77■□□□□ 0.6
PLOD3-216ENST00000489927 HIPK3Q9H422 1215 aa18.77■□□□□ 0.6
PLOD3-216ENST00000489927 IL23AQ9NPF7 189 aa18.77■□□□□ 0.6
PLOD3-216ENST00000489927 UMODL1Q5DID0 1318 aa18.76■□□□□ 0.59
PLOD3-216ENST00000489927 MUC3AQ02505 3323 aa18.76■□□□□ 0.59
PLOD3-216ENST00000489927 ICAM1P05362 532 aa18.76■□□□□ 0.59
PLOD3-216ENST00000489927 DCAF4Q8WV16 495 aa18.76■□□□□ 0.59
PLOD3-216ENST00000489927 TRPV6Q9H1D0 765 aa18.76■□□□□ 0.59
PLOD3-216ENST00000489927 RANBP17Q9H2T7 1088 aaKnown RBP18.76■□□□□ 0.59
PLOD3-216ENST00000489927 CXXC1Q9P0U4 656 aaPredicted RBP18.76■□□□□ 0.59
PLOD3-216ENST00000489927 ORC4O43929 436 aa18.75■□□□□ 0.59
PLOD3-216ENST00000489927 ZEB2O60315 1214 aa18.75■□□□□ 0.59
PLOD3-216ENST00000489927 FGRP09769 529 aa18.75■□□□□ 0.59
PLOD3-216ENST00000489927 SLC16A2P36021 539 aa18.75■□□□□ 0.59
PLOD3-216ENST00000489927 PSMC6P62333 389 aa18.75■□□□□ 0.59
PLOD3-216ENST00000489927 TTBK2Q6IQ55 1244 aa18.75■□□□□ 0.59
PLOD3-216ENST00000489927 MORC4Q8TE76 937 aa18.75■□□□□ 0.59
PLOD3-216ENST00000489927 HERVK_113Q902F9 699 aa18.75■□□□□ 0.59
PLOD3-216ENST00000489927 VTA1Q9NP79 307 aa18.75■□□□□ 0.59
PLOD3-216ENST00000489927 Q9Y3F1 56 aa18.75■□□□□ 0.59
PLOD3-216ENST00000489927 B4GALT4O60513 344 aa18.74■□□□□ 0.59
PLOD3-216ENST00000489927 BAATQ14032 418 aaPredicted RBP18.74■□□□□ 0.59
PLOD3-216ENST00000489927 ALX1Q15699 326 aa18.74■□□□□ 0.59
PLOD3-216ENST00000489927 ANKRD45Q5TZF3 282 aa18.74■□□□□ 0.59
PLOD3-216ENST00000489927 KIAA1211Q6ZU35 1233 aa18.74■□□□□ 0.59
PLOD3-216ENST00000489927 EVI5LQ96CN4 794 aa18.74■□□□□ 0.59
PLOD3-216ENST00000489927 NOC4LQ9BVI4 516 aaKnown RBP18.74■□□□□ 0.59
PLOD3-216ENST00000489927 PRDM12Q9H4Q4 367 aa18.74■□□□□ 0.59
PLOD3-216ENST00000489927 TOMM22Q9NS69 142 aa18.74■□□□□ 0.59
PLOD3-216ENST00000489927 LCTP09848 1927 aa18.74■□□□□ 0.59
PLOD3-216ENST00000489927 NFIBO00712 420 aa18.73■□□□□ 0.59
PLOD3-216ENST00000489927 FGBP02675 491 aa18.73■□□□□ 0.59
PLOD3-216ENST00000489927 CCL23P55773 120 aa18.73■□□□□ 0.59
PLOD3-216ENST00000489927 RRP12Q5JTH9 1297 aaKnown RBP18.73■□□□□ 0.59
PLOD3-216ENST00000489927 SYDE2Q5VT97 1194 aa18.73■□□□□ 0.59
PLOD3-216ENST00000489927 BTNL9Q6UXG8 535 aa18.73■□□□□ 0.59
PLOD3-216ENST00000489927 SYMPKQ92797 1274 aaKnown RBP18.73■□□□□ 0.59
PLOD3-216ENST00000489927 GAS2L1Q99501 681 aaPredicted RBP18.73■□□□□ 0.59
PLOD3-216ENST00000489927 TMEM47Q9BQJ4 181 aa18.73■□□□□ 0.59
PLOD3-216ENST00000489927 SEZ6LQ9BYH1 1024 aa18.73■□□□□ 0.59
PLOD3-216ENST00000489927 WNT8AQ9H1J5 351 aa18.73■□□□□ 0.59
PLOD3-216ENST00000489927 HELLSQ9NRZ9 838 aa18.73■□□□□ 0.59
PLOD3-216ENST00000489927 FRMPD2Q68DX3 1309 aaPredicted RBP18.73■□□□□ 0.59
PLOD3-216ENST00000489927 FGAP02671 866 aa18.72■□□□□ 0.59
PLOD3-216ENST00000489927 TOP1P11387 765 aaKnown RBP18.72■□□□□ 0.59
PLOD3-216ENST00000489927 ALDH5A1P51649 535 aaPredicted RBP18.72■□□□□ 0.59
PLOD3-216ENST00000489927 RAB30Q15771 203 aa18.72■□□□□ 0.59
PLOD3-216ENST00000489927 DUSP28Q4G0W2 176 aa18.72■□□□□ 0.59
PLOD3-216ENST00000489927 OTOP2Q7RTS6 562 aa18.72■□□□□ 0.59
PLOD3-216ENST00000489927 FAM227BQ96M60 508 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms