RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SSU72P8A0A1W2PR75 194 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 MEIS3P2A8K0S8 358 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 NOTOA8MTQ0 251 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 TNFRSF10CO14798 259 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 FFAR3O14843 346 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 FKTNO75072 461 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 USP2O75604 605 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 EFEMP2O95967 443 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 CNR2P34972 360 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 FANCCQ00597 558 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 RAD51AP2Q09MP3 1159 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 GIMAP6Q6P9H5 292 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 USP48Q86UV5 1035 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 SIRT2Q8IXJ6 389 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 ZNF655Q8N720 491 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 DRC1Q96MC2 740 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 SLC6A18Q96N87 628 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 PPP1R1BQ9UD71 204 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 ZMYM5Q9UJ78 669 aa4.7□□□□□ -1.66
DEPDC1-204ENST00000489862 CADPSQ9ULU8 1353 aa4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 TMEM82A0PJX8 343 aa4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 MEIS1O00470 390 aa4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 SIGLEC6O43699 453 aa4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 RECKO95980 971 aa4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 SYPP08247 313 aa4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 CCNFP41002 786 aa4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 PCBP3P57721 371 aaKnown RBP4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 YBX1P67809 324 aaKnown RBP4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 LRRFIP1Q32MZ4 808 aaKnown RBP4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 BBS9Q3SYG4 887 aa4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 LINC00116Q8NCU8 138 aa4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 SREK1Q8WXA9 508 aaKnown RBP4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 KISS1RQ969F8 398 aaPredicted RBP4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 MKRN2Q9H000 416 aaKnown RBP4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 CRTAC1Q9NQ79 661 aa4.69□□□□□ -1.66
DEPDC1-204ENST00000489862 ACRP10323 421 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 POLR3GLQ9BT43 218 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 CHST7Q9NS84 486 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 GFOD1Q9NXC2 390 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 FBXL21Q9UKT6 434 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 C9IYK1 514 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 RACK1P63244 317 aaKnown RBP4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 CEP128Q6ZU80 1094 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 LDHDQ86WU2 507 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 IGDCC3Q8IVU1 814 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 MAP6Q96JE9 813 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 HHIPL1Q96JK4 782 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 ZNF747Q9BV97 191 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 ZNRF3Q9ULT6 936 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 HS3ST3A1Q9Y663 406 aa4.68□□□□□ -1.66
DEPDC1-204ENST00000489862 CTSKP43235 329 aa4.67□□□□□ -1.66
DEPDC1-204ENST00000489862 TMEM62Q0P6H9 643 aa4.67□□□□□ -1.66
DEPDC1-204ENST00000489862 AUHQ13825 339 aaKnown RBP4.67□□□□□ -1.66
DEPDC1-204ENST00000489862 SLC14A2Q15849 920 aa4.67□□□□□ -1.66
DEPDC1-204ENST00000489862 FBXW10Q5XX13 1052 aa4.67□□□□□ -1.66
DEPDC1-204ENST00000489862 NLRX1Q86UT6 975 aa4.67□□□□□ -1.66
DEPDC1-204ENST00000489862 RNF34Q969K3 372 aa4.67□□□□□ -1.66
DEPDC1-204ENST00000489862 C8orf37Q96NL8 207 aa4.67□□□□□ -1.66
DEPDC1-204ENST00000489862 METTL5Q9NRN9 209 aaKnown RBP4.67□□□□□ -1.66
DEPDC1-204ENST00000489862 PPT2Q9UMR5 302 aa4.67□□□□□ -1.66
DEPDC1-204ENST00000489862 PCDHB12Q9Y5F1 795 aa4.67□□□□□ -1.66
DEPDC1-204ENST00000489862 NRDCO43847 1150 aa4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 LMO1P25800 156 aa4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 KIR2DL1P43626 348 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 KIR2DL2P43627 348 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 KLF10Q13118 480 aa4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 KIR3DS1Q14943 382 aa4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 NAALADL2Q58DX5 795 aa4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 TDRD10Q5VZ19 366 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 INTS3Q68E01 1043 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 DDX1Q92499 740 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 FERD3LQ96RJ6 166 aa4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 PLCD4Q9BRC7 762 aa4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 SUCOQ9UBS9 1254 aaKnown RBP4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 TSC22D4Q9Y3Q8 395 aa4.66□□□□□ -1.66
DEPDC1-204ENST00000489862 SHOXO15266 292 aa4.65□□□□□ -1.66
DEPDC1-204ENST00000489862 BUB1BO60566 1050 aaPredicted RBP4.65□□□□□ -1.66
DEPDC1-204ENST00000489862 SDHBP21912 280 aa4.65□□□□□ -1.66
DEPDC1-204ENST00000489862 ZYXQ15942 572 aaKnown RBP4.65□□□□□ -1.66
DEPDC1-204ENST00000489862 C9orf131Q5VYM1 1079 aa4.65□□□□□ -1.66
DEPDC1-204ENST00000489862 CRTC3Q6UUV7 619 aa4.65□□□□□ -1.66
DEPDC1-204ENST00000489862 RUFY4Q6ZNE9 571 aa4.65□□□□□ -1.66
DEPDC1-204ENST00000489862 CCDC144CPQ8IYA2 1237 aa4.65□□□□□ -1.66
DEPDC1-204ENST00000489862 FAM86C1Q9NVL1 165 aa4.65□□□□□ -1.66
DEPDC1-204ENST00000489862 DDX41Q9UJV9 622 aaKnown RBP4.65□□□□□ -1.66
DEPDC1-204ENST00000489862 FADS2P1A8MWK0 482 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 IMPDH2P12268 514 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 RTP1P59025 263 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 DCAF15Q66K64 600 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 LIPIQ6XZB0 460 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 PPFIBP1Q86W92 1011 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 C7orf61Q8IZ16 206 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 FCRL2Q96LA5 508 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 DHRS1Q96LJ7 313 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 CDK5RAP1Q96SZ6 601 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 SPATA25Q9BR10 227 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 CDADC1Q9BWV3 514 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 WDR33Q9C0J8 1336 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 ZNF205O95201 554 aa4.64□□□□□ -1.67
DEPDC1-204ENST00000489862 TP53P04637 393 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms