RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 SNAP25P60880 206 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 IKQ13123 557 aaPredicted RBP17.83■□□□□ 0.44
FAM3D-204ENST00000489857 LRRFIP1Q32MZ4 808 aaKnown RBP17.83■□□□□ 0.44
FAM3D-204ENST00000489857 TKFCQ3LXA3 575 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 ZMYM1Q5SVZ6 1142 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 KCTD1Q719H9 257 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 RASGRP2Q7LDG7 609 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 TLK2Q86UE8 772 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 PI4K2BQ8TCG2 481 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 OTUD7AQ8TE49 926 aaPredicted RBP17.83■□□□□ 0.44
FAM3D-204ENST00000489857 TRERF1Q96PN7 1200 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 PRDM12Q9H4Q4 367 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 IL23AQ9NPF7 189 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 CXXC1Q9P0U4 656 aaPredicted RBP17.83■□□□□ 0.44
FAM3D-204ENST00000489857 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.83■□□□□ 0.44
FAM3D-204ENST00000489857 LRRC37A2A6NM11 1700 aa17.83■□□□□ 0.44
FAM3D-204ENST00000489857 TTC41PQ6P2S7 1318 aa17.82■□□□□ 0.44
FAM3D-204ENST00000489857 ASB14A6NK59 587 aa17.82■□□□□ 0.44
FAM3D-204ENST00000489857 PLA2G6O60733 806 aa17.82■□□□□ 0.44
FAM3D-204ENST00000489857 SLC3A2P08195 630 aaKnown RBP17.82■□□□□ 0.44
FAM3D-204ENST00000489857 ALAS1P13196 640 aa17.82■□□□□ 0.44
FAM3D-204ENST00000489857 FSCN1Q16658 493 aaKnown RBP17.82■□□□□ 0.44
FAM3D-204ENST00000489857 MUM1L1Q5H9M0 696 aa17.82■□□□□ 0.44
FAM3D-204ENST00000489857 TJAP1Q5JTD0 557 aa17.82■□□□□ 0.44
FAM3D-204ENST00000489857 TMEM63BQ5T3F8 832 aa17.82■□□□□ 0.44
FAM3D-204ENST00000489857 HERVK_113Q902F9 699 aa17.82■□□□□ 0.44
FAM3D-204ENST00000489857 INCENPQ9NQS7 918 aa17.82■□□□□ 0.44
FAM3D-204ENST00000489857 PDGFCQ9NRA1 345 aa17.82■□□□□ 0.44
FAM3D-204ENST00000489857 IL17RBQ9NRM6 502 aa17.82■□□□□ 0.44
FAM3D-204ENST00000489857 NMT2O60551 498 aa17.81■□□□□ 0.44
FAM3D-204ENST00000489857 CABYRO75952 493 aa17.81■□□□□ 0.44
FAM3D-204ENST00000489857 ITGA7Q13683 1181 aa17.81■□□□□ 0.44
FAM3D-204ENST00000489857 ADGRE1Q14246 886 aa17.81■□□□□ 0.44
FAM3D-204ENST00000489857 RCSD1Q6JBY9 416 aa17.81■□□□□ 0.44
FAM3D-204ENST00000489857 TAPT1Q6NXT6 567 aa17.81■□□□□ 0.44
FAM3D-204ENST00000489857 FBXO16Q8IX29 292 aaPredicted RBP17.81■□□□□ 0.44
FAM3D-204ENST00000489857 PPM1EQ8WY54 764 aa17.81■□□□□ 0.44
FAM3D-204ENST00000489857 GAS2L1Q99501 681 aaPredicted RBP17.81■□□□□ 0.44
FAM3D-204ENST00000489857 FSD1Q9BTV5 496 aa17.81■□□□□ 0.44
FAM3D-204ENST00000489857 HIPK3Q9H422 1215 aa17.81■□□□□ 0.44
FAM3D-204ENST00000489857 CYP39A1Q9NYL5 469 aa17.81■□□□□ 0.44
FAM3D-204ENST00000489857 PRR12Q9ULL5 1215 aa17.81■□□□□ 0.44
FAM3D-204ENST00000489857 STX8Q9UNK0 236 aa17.81■□□□□ 0.44
FAM3D-204ENST00000489857 DYNC1LI2O43237 492 aaPredicted RBP17.8■□□□□ 0.44
FAM3D-204ENST00000489857 CTDSPL2Q05D32 466 aa17.8■□□□□ 0.44
FAM3D-204ENST00000489857 EEPD1Q7L9B9 569 aa17.8■□□□□ 0.44
FAM3D-204ENST00000489857 PURBQ96QR8 312 aaKnown RBP17.8■□□□□ 0.44
FAM3D-204ENST00000489857 NOC4LQ9BVI4 516 aaKnown RBP17.8■□□□□ 0.44
FAM3D-204ENST00000489857 AP5M1Q9H0R1 490 aa17.8■□□□□ 0.44
FAM3D-204ENST00000489857 TRPV6Q9H1D0 765 aa17.8■□□□□ 0.44
FAM3D-204ENST00000489857 CHD9Q3L8U1 2897 aa17.79■□□□□ 0.44
FAM3D-204ENST00000489857 TSPY2A6NKD2 308 aa17.79■□□□□ 0.44
FAM3D-204ENST00000489857 ERC2O15083 957 aa17.79■□□□□ 0.44
FAM3D-204ENST00000489857 FGBP02675 491 aa17.79■□□□□ 0.44
FAM3D-204ENST00000489857 CCL23P55773 120 aa17.79■□□□□ 0.44
FAM3D-204ENST00000489857 PSMC6P62333 389 aa17.79■□□□□ 0.44
FAM3D-204ENST00000489857 RAB30Q15771 203 aa17.79■□□□□ 0.44
FAM3D-204ENST00000489857 AKNAD1Q5T1N1 836 aa17.79■□□□□ 0.44
FAM3D-204ENST00000489857 NSMFQ6X4W1 530 aa17.79■□□□□ 0.44
FAM3D-204ENST00000489857 WNT8AQ9H1J5 351 aa17.79■□□□□ 0.44
FAM3D-204ENST00000489857 NKX2-4Q9H2Z4 354 aa17.79■□□□□ 0.44
FAM3D-204ENST00000489857 YBX2Q9Y2T7 364 aaKnown RBP17.79■□□□□ 0.44
FAM3D-204ENST00000489857 B4GALT4O60513 344 aa17.78■□□□□ 0.44
FAM3D-204ENST00000489857 PPP4R3BQ5MIZ7 849 aa17.78■□□□□ 0.44
FAM3D-204ENST00000489857 IQSEC1Q6DN90 963 aa17.78■□□□□ 0.44
FAM3D-204ENST00000489857 OTOP2Q7RTS6 562 aa17.78■□□□□ 0.44
FAM3D-204ENST00000489857 MORC4Q8TE76 937 aa17.78■□□□□ 0.44
FAM3D-204ENST00000489857 VWCEQ96DN2 955 aa17.78■□□□□ 0.44
FAM3D-204ENST00000489857 MSRAQ9UJ68 235 aa17.78■□□□□ 0.44
FAM3D-204ENST00000489857 CCPG1Q9ULG6 757 aa17.78■□□□□ 0.44
FAM3D-204ENST00000489857 MTMR7Q9Y216 660 aa17.78■□□□□ 0.44
FAM3D-204ENST00000489857 Q9Y3F1 56 aa17.78■□□□□ 0.44
FAM3D-204ENST00000489857 PCDHB15Q9Y5E8 787 aa17.78■□□□□ 0.44
FAM3D-204ENST00000489857 ZEB2O60315 1214 aa17.77■□□□□ 0.44
FAM3D-204ENST00000489857 NOVP48745 357 aa17.77■□□□□ 0.44
FAM3D-204ENST00000489857 TTBK2Q6IQ55 1244 aa17.77■□□□□ 0.44
FAM3D-204ENST00000489857 MTIF3Q9H2K0 278 aaKnown RBP17.77■□□□□ 0.44
FAM3D-204ENST00000489857 VTA1Q9NP79 307 aa17.77■□□□□ 0.44
FAM3D-204ENST00000489857 LCTP09848 1927 aa17.76■□□□□ 0.43
FAM3D-204ENST00000489857 TNFRSF10AO00220 468 aa17.76■□□□□ 0.43
FAM3D-204ENST00000489857 ICAM1P05362 532 aa17.76■□□□□ 0.43
FAM3D-204ENST00000489857 CCDC96Q2M329 555 aa17.76■□□□□ 0.43
FAM3D-204ENST00000489857 VPS53Q5VIR6 699 aa17.76■□□□□ 0.43
FAM3D-204ENST00000489857 KIAA1211Q6ZU35 1233 aa17.76■□□□□ 0.43
FAM3D-204ENST00000489857 ATXN2LQ8WWM7 1075 aaKnown RBP17.76■□□□□ 0.43
FAM3D-204ENST00000489857 SEZ6LQ9BYH1 1024 aa17.76■□□□□ 0.43
FAM3D-204ENST00000489857 RANBP17Q9H2T7 1088 aaKnown RBP17.76■□□□□ 0.43
FAM3D-204ENST00000489857 ANAPC4Q9UJX5 808 aa17.76■□□□□ 0.43
FAM3D-204ENST00000489857 SALL3Q9BXA9 1300 aa17.75■□□□□ 0.43
FAM3D-204ENST00000489857 RANBP6O60518 1105 aaKnown RBP17.75■□□□□ 0.43
FAM3D-204ENST00000489857 MX1P20591 662 aa17.75■□□□□ 0.43
FAM3D-204ENST00000489857 SLC16A2P36021 539 aa17.75■□□□□ 0.43
FAM3D-204ENST00000489857 RABGGTBP53611 331 aa17.75■□□□□ 0.43
FAM3D-204ENST00000489857 BAATQ14032 418 aaPredicted RBP17.75■□□□□ 0.43
FAM3D-204ENST00000489857 CCDC85BQ15834 202 aaPredicted RBP17.75■□□□□ 0.43
FAM3D-204ENST00000489857 DUSP28Q4G0W2 176 aa17.75■□□□□ 0.43
FAM3D-204ENST00000489857 DCAF4Q8WV16 495 aa17.75■□□□□ 0.43
FAM3D-204ENST00000489857 SCLYQ96I15 445 aa17.75■□□□□ 0.43
FAM3D-204ENST00000489857 ALDH8A1Q9H2A2 487 aaPredicted RBP17.75■□□□□ 0.43
FAM3D-204ENST00000489857 SLC28A3Q9HAS3 691 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms