RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TMEM179Q6ZVK1 233 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 DGLUCYQ7Z3D6 616 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 MAGEB6Q8N7X4 407 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 TEX13BQ9BXU2 312 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 VCPKMTQ9H867 229 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 SNRKQ9NRH2 765 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 ADAMTS5Q9UNA0 930 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 NOD1Q9Y239 953 aa14.03□□□□□ -0.16
HDAC6-233ENST00000489352 MED19A0JLT2 244 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-233ENST00000489352 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
HDAC6-233ENST00000489352 CYP7A1P22680 504 aa14.02□□□□□ -0.17
HDAC6-233ENST00000489352 ZXDAP98168 799 aa14.02□□□□□ -0.17
HDAC6-233ENST00000489352 CLUL1Q15846 466 aa14.02□□□□□ -0.17
HDAC6-233ENST00000489352 CCDC144CPQ8IYA2 1237 aa14.02□□□□□ -0.17
HDAC6-233ENST00000489352 COPRSQ9NQ92 184 aa14.02□□□□□ -0.17
HDAC6-233ENST00000489352 GPHNQ9NQX3 736 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-233ENST00000489352 ZNF214Q9UL59 606 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-233ENST00000489352 TMX2Q9Y320 296 aa14.02□□□□□ -0.17
HDAC6-233ENST00000489352 TPRP12270 2363 aaKnown RBP14.01□□□□□ -0.17
HDAC6-233ENST00000489352 DNAJC25-GNG10A0A024R161 153 aa14.01□□□□□ -0.17
HDAC6-233ENST00000489352 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-233ENST00000489352 GJB5O95377 273 aa14.01□□□□□ -0.17
HDAC6-233ENST00000489352 PLCD1P51178 756 aa14.01□□□□□ -0.17
HDAC6-233ENST00000489352 NUBP1P53384 320 aa14.01□□□□□ -0.17
HDAC6-233ENST00000489352 VCPP55072 806 aaKnown RBP14.01□□□□□ -0.17
HDAC6-233ENST00000489352 TCEAL5Q5H9L2 206 aa14.01□□□□□ -0.17
HDAC6-233ENST00000489352 FAM117BQ6P1L5 589 aa14.01□□□□□ -0.17
HDAC6-233ENST00000489352 WDR63Q8IWG1 891 aa14.01□□□□□ -0.17
HDAC6-233ENST00000489352 ADSSL1Q8N142 457 aa14.01□□□□□ -0.17
HDAC6-233ENST00000489352 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.01□□□□□ -0.17
HDAC6-233ENST00000489352 NKD2Q969F2 451 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-233ENST00000489352 NSUN3Q9H649 340 aaKnown RBP14.01□□□□□ -0.17
HDAC6-233ENST00000489352 FBXO28Q9NVF7 368 aa14.01□□□□□ -0.17
HDAC6-233ENST00000489352 PPP1R9AQ9ULJ8 1098 aa14.01□□□□□ -0.17
HDAC6-233ENST00000489352 SALL2Q9Y467 1007 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-233ENST00000489352 VPS13AQ96RL7 3174 aa14□□□□□ -0.17
HDAC6-233ENST00000489352 PTPRCP08575 1304 aa14□□□□□ -0.17
HDAC6-233ENST00000489352 ICA1Q05084 483 aa14□□□□□ -0.17
HDAC6-233ENST00000489352 TTC39AQ5SRH9 613 aa14□□□□□ -0.17
HDAC6-233ENST00000489352 CCDC155Q8N6L0 562 aa14□□□□□ -0.17
HDAC6-233ENST00000489352 MIGA1Q8NAN2 632 aa14□□□□□ -0.17
HDAC6-233ENST00000489352 CNTNAP3BQ96NU0 1288 aa14□□□□□ -0.17
HDAC6-233ENST00000489352 C17orf80Q9BSJ5 609 aa14□□□□□ -0.17
HDAC6-233ENST00000489352 CNTNAP3Q9BZ76 1288 aa14□□□□□ -0.17
HDAC6-233ENST00000489352 POLR3EQ9NVU0 708 aa14□□□□□ -0.17
HDAC6-233ENST00000489352 ASTN1O14525 1302 aa13.99□□□□□ -0.17
HDAC6-233ENST00000489352 MBTPS2O43462 519 aa13.99□□□□□ -0.17
HDAC6-233ENST00000489352 DEFB103AP81534 67 aa13.99□□□□□ -0.17
HDAC6-233ENST00000489352 SIGLEC14Q08ET2 396 aa13.99□□□□□ -0.17
HDAC6-233ENST00000489352 LRRFIP1Q32MZ4 808 aaKnown RBP13.99□□□□□ -0.17
HDAC6-233ENST00000489352 RPAINQ86UA6 219 aa13.99□□□□□ -0.17
HDAC6-233ENST00000489352 CPXCR1Q8N123 301 aa13.99□□□□□ -0.17
HDAC6-233ENST00000489352 GOPCQ9HD26 462 aa13.99□□□□□ -0.17
HDAC6-233ENST00000489352 FBXO40Q9UH90 709 aa13.99□□□□□ -0.17
HDAC6-233ENST00000489352 GNEQ9Y223 722 aaKnown RBP13.99□□□□□ -0.17
HDAC6-233ENST00000489352 INSL6Q9Y581 213 aa13.99□□□□□ -0.17
HDAC6-233ENST00000489352 NAV1Q8NEY1 1877 aa13.99□□□□□ -0.17
HDAC6-233ENST00000489352 GVINP1Q7Z2Y8 2422 aa13.99□□□□□ -0.17
HDAC6-233ENST00000489352 ZNF292O60281 2723 aa13.99□□□□□ -0.17
HDAC6-233ENST00000489352 NLRC5Q86WI3 1866 aa13.98□□□□□ -0.17
HDAC6-233ENST00000489352 IGSF3O75054 1194 aa13.98□□□□□ -0.17
HDAC6-233ENST00000489352 NBL1P41271 181 aa13.98□□□□□ -0.17
HDAC6-233ENST00000489352 GPM6BQ13491 265 aa13.98□□□□□ -0.17
HDAC6-233ENST00000489352 CCDC158Q5M9N0 1113 aa13.98□□□□□ -0.17
HDAC6-233ENST00000489352 MCTP2Q6DN12 878 aa13.98□□□□□ -0.17
HDAC6-233ENST00000489352 CNKSR3Q6P9H4 555 aa13.98□□□□□ -0.17
HDAC6-233ENST00000489352 SAMD11Q96NU1 681 aa13.98□□□□□ -0.17
HDAC6-233ENST00000489352 Q9Y3F1 56 aa13.98□□□□□ -0.17
HDAC6-233ENST00000489352 MYO7AQ13402 2215 aa13.97□□□□□ -0.17
HDAC6-233ENST00000489352 ABHD14A-ACY1A0A1B0GW23 586 aa13.97□□□□□ -0.17
HDAC6-233ENST00000489352 ASB14A6NK59 587 aa13.97□□□□□ -0.17
HDAC6-233ENST00000489352 GALR2O43603 387 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-233ENST00000489352 EFCAB14O75071 495 aa13.97□□□□□ -0.17
HDAC6-233ENST00000489352 ZBED4O75132 1171 aa13.97□□□□□ -0.17
HDAC6-233ENST00000489352 MYL3P08590 195 aa13.97□□□□□ -0.17
HDAC6-233ENST00000489352 SMPD1P17405 629 aa13.97□□□□□ -0.17
HDAC6-233ENST00000489352 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-233ENST00000489352 SMAD4Q13485 552 aaKnown RBP13.97□□□□□ -0.17
HDAC6-233ENST00000489352 IKBKEQ14164 716 aa13.97□□□□□ -0.17
HDAC6-233ENST00000489352 IQSEC1Q6DN90 963 aa13.97□□□□□ -0.17
HDAC6-233ENST00000489352 RIPK3Q9Y572 518 aa13.97□□□□□ -0.17
HDAC6-233ENST00000489352 CHD8Q9HCK8 2581 aa13.97□□□□□ -0.17
HDAC6-233ENST00000489352 DNAH14Q0VDD8 3507 aa13.96□□□□□ -0.17
HDAC6-233ENST00000489352 IDH1O75874 414 aaKnown RBP13.96□□□□□ -0.17
HDAC6-233ENST00000489352 CYP2E1P05181 493 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-233ENST00000489352 EPC2Q52LR7 807 aa13.96□□□□□ -0.17
HDAC6-233ENST00000489352 BRDTQ58F21 947 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-233ENST00000489352 FAM83BQ5T0W9 1011 aa13.96□□□□□ -0.17
HDAC6-233ENST00000489352 REPS2Q8NFH8 660 aa13.96□□□□□ -0.17
HDAC6-233ENST00000489352 SLF1Q9BQI6 1058 aa13.96□□□□□ -0.17
HDAC6-233ENST00000489352 KATNBL1Q9H079 304 aa13.96□□□□□ -0.17
HDAC6-233ENST00000489352 ALG13Q9NP73 1137 aaKnown RBP13.96□□□□□ -0.17
HDAC6-233ENST00000489352 MCM9Q9NXL9 1143 aa13.96□□□□□ -0.17
HDAC6-233ENST00000489352 ACACBO00763 2458 aa13.96□□□□□ -0.18
HDAC6-233ENST00000489352 DMXL1Q9Y485 3027 aa13.96□□□□□ -0.18
HDAC6-233ENST00000489352 NCOR2Q9Y618 2525 aa13.95□□□□□ -0.18
HDAC6-233ENST00000489352 H3BNC9 293 aa13.95□□□□□ -0.18
HDAC6-233ENST00000489352 PARNO95453 639 aaKnown RBP13.95□□□□□ -0.18
HDAC6-233ENST00000489352 CPT1AP50416 773 aa13.95□□□□□ -0.18
HDAC6-233ENST00000489352 DDX10Q13206 875 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms