RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 CUL5Q93034 780 aa13.18□□□□□ -0.3
CMSS1-205ENST00000489081 MS4A4AQ96JQ5 239 aa13.18□□□□□ -0.3
CMSS1-205ENST00000489081 FTOQ9C0B1 505 aaKnown RBP eCLIP13.18□□□□□ -0.3
CMSS1-205ENST00000489081 GLT8D2Q9H1C3 349 aa13.18□□□□□ -0.3
CMSS1-205ENST00000489081 PSTPIP2Q9H939 334 aa13.18□□□□□ -0.3
CMSS1-205ENST00000489081 GDPD2Q9HCC8 539 aa13.18□□□□□ -0.3
CMSS1-205ENST00000489081 HOXC10Q9NYD6 342 aa13.18□□□□□ -0.3
CMSS1-205ENST00000489081 CFAP45Q9UL16 551 aa13.18□□□□□ -0.3
CMSS1-205ENST00000489081 ABCB11O95342 1321 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 SPDYE16A6NNV3 312 aaPredicted RBP13.17□□□□□ -0.3
CMSS1-205ENST00000489081 OPLAHO14841 1288 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 FIBPO43427 364 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 TOMM70O94826 608 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 CLK2P49760 499 aaKnown RBP13.17□□□□□ -0.3
CMSS1-205ENST00000489081 TOB1P50616 345 aaPredicted RBP13.17□□□□□ -0.3
CMSS1-205ENST00000489081 GTF2A2P52657 109 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 RILPL1Q5EBL4 403 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 PIK3AP1Q6ZUJ8 805 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 KRT25Q7Z3Z0 450 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
CMSS1-205ENST00000489081 LEO1Q8WVC0 666 aaPredicted RBP13.17□□□□□ -0.3
CMSS1-205ENST00000489081 AGBL1Q96MI9 1066 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 SCAND2PQ9GZW5 306 aaPredicted RBP13.17□□□□□ -0.3
CMSS1-205ENST00000489081 RAVER2Q9HCJ3 691 aaKnown RBP13.17□□□□□ -0.3
CMSS1-205ENST00000489081 POLR3EQ9NVU0 708 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 RTEL1Q9NZ71 1219 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 PNMA2Q9UL42 364 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 CCPG1Q9ULG6 757 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 MRPL11Q9Y3B7 192 aaKnown RBP13.17□□□□□ -0.3
CMSS1-205ENST00000489081 CTDP1Q9Y5B0 961 aaPredicted RBP13.17□□□□□ -0.3
CMSS1-205ENST00000489081 CLIC4Q9Y696 253 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 LOC285556D6RIA3 1793 aa13.17□□□□□ -0.3
CMSS1-205ENST00000489081 PTPRFP10586 1907 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 CCDC194A0A1B0GVG4 234 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 ATP2A1O14983 1001 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 ZBTB48P10074 688 aaPredicted RBP13.16□□□□□ -0.3
CMSS1-205ENST00000489081 CETPP11597 493 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 NASPP49321 788 aaPredicted RBP13.16□□□□□ -0.3
CMSS1-205ENST00000489081 OAZ1P54368 228 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 UBE2SQ16763 222 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 CSPP1Q1MSJ5 1256 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 ANO1Q5XXA6 986 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 SAPCD2Q86UD0 394 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 TEX2Q8IWB9 1127 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 CPXCR1Q8N123 301 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 SPATA32Q96LK8 384 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 ASCC2Q9H1I8 757 aaPredicted RBP13.16□□□□□ -0.3
CMSS1-205ENST00000489081 LMBRD1Q9NUN5 540 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 TMEM260Q9NX78 707 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 BIN2Q9UBW5 565 aaPredicted RBP13.16□□□□□ -0.3
CMSS1-205ENST00000489081 RCOR1Q9UKL0 485 aa13.16□□□□□ -0.3
CMSS1-205ENST00000489081 NOL7Q9UMY1 257 aaKnown RBP13.16□□□□□ -0.3
CMSS1-205ENST00000489081 TRPM7Q96QT4 1865 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 MEIS2O14770 477 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 PRPF40AO75400 957 aaKnown RBP13.15□□□□□ -0.3
CMSS1-205ENST00000489081 YEATS4O95619 227 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 OSBPP22059 807 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 YY1P25490 414 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 IRX3P78415 501 aaPredicted RBP13.15□□□□□ -0.3
CMSS1-205ENST00000489081 CEBPZQ03701 1054 aaKnown RBP13.15□□□□□ -0.3
CMSS1-205ENST00000489081 MKRN3Q13064 507 aaKnown RBP13.15□□□□□ -0.3
CMSS1-205ENST00000489081 PABPC4Q13310 644 aaKnown RBP eCLIP13.15□□□□□ -0.3
CMSS1-205ENST00000489081 NBR1Q14596 966 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 TMEM132BQ14DG7 1078 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 NONOQ15233 471 aaKnown RBP eCLIP13.15□□□□□ -0.3
CMSS1-205ENST00000489081 JAKMIP3Q5VZ66 844 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 POTEEQ6S8J3 1075 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 LBX2Q6XYB7 198 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 RASAL3Q86YV0 1011 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 LINC00301Q8NCQ3 95 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 CLEC4DQ8WXI8 215 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 BRI3BPQ8WY22 251 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 P2RX7Q99572 595 aaKnown RBP13.15□□□□□ -0.3
CMSS1-205ENST00000489081 ZNF214Q9UL59 606 aaPredicted RBP13.15□□□□□ -0.3
CMSS1-205ENST00000489081 TLL2Q9Y6L7 1015 aa13.15□□□□□ -0.3
CMSS1-205ENST00000489081 ELP1O95163 1332 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 RLFQ13129 1914 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 CCL15-CCL14A0A0B4J2E2 113 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 PIK3CDO00329 1044 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 WNT7AO00755 349 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 ALAS1P13196 640 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 PTMSP20962 102 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 ZNF157P51786 506 aaPredicted RBP13.14□□□□□ -0.31
CMSS1-205ENST00000489081 FSTL1Q12841 308 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 AP3B2Q13367 1082 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 PTPAQ15257 358 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 SF3A1Q15459 793 aaKnown RBP13.14□□□□□ -0.31
CMSS1-205ENST00000489081 CCL15Q16663 113 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 MCTP2Q6DN12 878 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 RGMBQ6NW40 437 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 USP17L6PQ6QN14 398 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 MB21D1Q8N884 522 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 ZNF784Q8NCA9 323 aaPredicted RBP13.14□□□□□ -0.31
CMSS1-205ENST00000489081 SLC45A1Q9Y2W3 748 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 PCDHB6Q9Y5E3 794 aa13.14□□□□□ -0.31
CMSS1-205ENST00000489081 TESPA1A2RU30 521 aaPredicted RBP13.13□□□□□ -0.31
CMSS1-205ENST00000489081 TMEM88BA6NKF7 163 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 BTBD19C9JJ37 291 aa13.13□□□□□ -0.31
CMSS1-205ENST00000489081 GCOM1H8Y6P7 765 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms