RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 JAG2Q9Y219 1238 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 DAGLAQ9Y4D2 1042 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 PCDHB6Q9Y5E3 794 aa7.54□□□□□ -1.2
HDLBP-243ENST00000488923 TAF1P21675 1872 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 LTBP1Q14766 1721 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 CCDC194A0A1B0GVG4 234 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 ESYT2A0FGR8 921 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 KLRF2D3W0D1 207 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 SLFN14P0C7P3 912 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 HOXA7P31268 230 aaPredicted RBP7.53□□□□□ -1.2
HDLBP-243ENST00000488923 PRPHP41219 470 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 PLCD1P51178 756 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 SUZ12Q15022 739 aaKnown RBP7.53□□□□□ -1.2
HDLBP-243ENST00000488923 DPCR1Q3MIW9 517 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 GPATCH4Q5T3I0 446 aaKnown RBP7.53□□□□□ -1.2
HDLBP-243ENST00000488923 MCTP2Q6DN12 878 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 C2CD5Q86YS7 1000 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 TEX2Q8IWB9 1127 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 DHX40Q8IX18 779 aaKnown RBP7.53□□□□□ -1.2
HDLBP-243ENST00000488923 CMTR1Q8N1G2 835 aaKnown RBP7.53□□□□□ -1.2
HDLBP-243ENST00000488923 IQUBQ8NA54 791 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 CCDC150Q8NCX0 1101 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 DYNLL2Q96FJ2 89 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 PRIMPOLQ96LW4 560 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 AK8Q96MA6 479 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 ZDHHC15Q96MV8 337 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 NAP1L5Q96NT1 182 aaPredicted RBP7.53□□□□□ -1.2
HDLBP-243ENST00000488923 GPR101Q96P66 508 aaPredicted RBP7.53□□□□□ -1.2
HDLBP-243ENST00000488923 GSDMAQ96QA5 445 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 NAP1L4Q99733 375 aaKnown RBP7.53□□□□□ -1.2
HDLBP-243ENST00000488923 GLT8D2Q9H1C3 349 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 VPS33BQ9H267 617 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 MAGEF1Q9HAY2 307 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 SPTLC3Q9NUV7 552 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 RMND1Q9NWS8 449 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 STK32BQ9NY57 414 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 NXF1Q9UBU9 619 aaKnown RBP7.53□□□□□ -1.2
HDLBP-243ENST00000488923 SAP30BPQ9UHR5 308 aaKnown RBP7.53□□□□□ -1.2
HDLBP-243ENST00000488923 MAD2L2Q9UI95 211 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 SERPINB13Q9UIV8 391 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 SYNPO2Q9UMS6 1093 aa7.53□□□□□ -1.2
HDLBP-243ENST00000488923 TTF2Q9UNY4 1162 aaKnown RBP7.53□□□□□ -1.2
HDLBP-243ENST00000488923 NAV1Q8NEY1 1877 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 POLR2DO15514 142 aaKnown RBP7.52□□□□□ -1.21
HDLBP-243ENST00000488923 AP5Z1O43299 807 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 CCP110O43303 1012 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 NMT2O60551 498 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 TTLL1O95922 423 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 ERCC5P28715 1186 aaPredicted RBP7.52□□□□□ -1.21
HDLBP-243ENST00000488923 PPP1R2P41236 205 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 KCNJ6P48051 423 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 SARSP49591 514 aaKnown RBP7.52□□□□□ -1.21
HDLBP-243ENST00000488923 GABPAQ06546 454 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 TRAF1Q13077 416 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 NOLC1Q14978 699 aaKnown RBP eCLIP7.52□□□□□ -1.21
HDLBP-243ENST00000488923 NPY5RQ15761 445 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 GRIK5Q16478 980 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 LONRF3Q496Y0 759 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 DNTTIP2Q5QJE6 756 aaKnown RBP7.52□□□□□ -1.21
HDLBP-243ENST00000488923 METTL16Q86W50 562 aaKnown RBP7.52□□□□□ -1.21
HDLBP-243ENST00000488923 SPATA20Q8TB22 786 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 KIAA1524Q8TCG1 905 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 ZNF622Q969S3 477 aaKnown RBP eCLIP7.52□□□□□ -1.21
HDLBP-243ENST00000488923 CLIC6Q96NY7 704 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 ZMYND12Q9H0C1 365 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 OSBPL5Q9H0X9 879 aaPredicted RBP7.52□□□□□ -1.21
HDLBP-243ENST00000488923 CSRNP2Q9H175 543 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 CUEDC2Q9H467 287 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 USP40Q9NVE5 1235 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 MTMR4Q9NYA4 1195 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 SERPINA10Q9UK55 444 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 BRWD3Q6RI45 1802 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 QSER1Q2KHR3 1735 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 SNED1Q8TER0 1413 aa7.52□□□□□ -1.21
HDLBP-243ENST00000488923 IGKV6D-41A0A0C4DH26 115 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 USP17L3A6NCW0 530 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 USP17L4A6NCW7 530 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 UBE2Q2LH0YL09 131 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 SMIM22K7EJ46 135 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 TUBB4AP04350 444 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 SNHG28P0DPA3 235 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 CRKP46108 304 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 NAPAP54920 295 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 MDM2Q00987 491 aaPredicted RBP7.51□□□□□ -1.21
HDLBP-243ENST00000488923 SLC15A2Q16348 729 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 DTHD1Q6ZMT9 781 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 PIK3AP1Q6ZUJ8 805 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 USP17L1Q7RTZ2 530 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 CCDC186Q7Z3E2 898 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 HEATR3Q7Z4Q2 680 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 METTL3Q86U44 580 aaKnown RBP7.51□□□□□ -1.21
HDLBP-243ENST00000488923 FOXP4Q8IVH2 680 aaPredicted RBP7.51□□□□□ -1.21
HDLBP-243ENST00000488923 SPC24Q8NBT2 197 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 CCDC112Q8NEF3 446 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 ENOX1Q8TC92 643 aaKnown RBP7.51□□□□□ -1.21
HDLBP-243ENST00000488923 KCNV2Q8TDN2 545 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 CCDC47Q96A33 483 aaKnown RBP7.51□□□□□ -1.21
HDLBP-243ENST00000488923 CEP95Q96GE4 821 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 IDI2Q9BXS1 227 aa7.51□□□□□ -1.21
HDLBP-243ENST00000488923 TRIM34Q9BYJ4 488 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms