RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 NONOQ15233 471 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL21A1-211ENST00000488912 ZNF174Q15697 407 aa12.47□□□□□ -0.41
COL21A1-211ENST00000488912 AXDND1Q5T1B0 1012 aaPredicted RBP12.47□□□□□ -0.41
COL21A1-211ENST00000488912 ADALQ6DHV7 355 aa12.47□□□□□ -0.41
COL21A1-211ENST00000488912 PRPF38AQ8NAV1 312 aaKnown RBP12.47□□□□□ -0.41
COL21A1-211ENST00000488912 ZNF408Q9H9D4 720 aa12.47□□□□□ -0.41
COL21A1-211ENST00000488912 OPLAHO14841 1288 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 MRPL12P52815 198 aaKnown RBP12.46□□□□□ -0.41
COL21A1-211ENST00000488912 LDHDQ86WU2 507 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 CCAR1Q8IX12 1150 aaKnown RBP12.46□□□□□ -0.41
COL21A1-211ENST00000488912 JMYQ8N9B5 988 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 OTUD5Q96G74 571 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 GOLPH3LQ9H4A5 285 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 PPP1R9AQ9ULJ8 1098 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 CEP131Q9UPN4 1083 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 FSD2A1L4K1 749 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 MCM7P33993 719 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 USP17L6PQ6QN14 398 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 ARMC9Q7Z3E5 817 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 RBM46Q8TBY0 533 aaKnown RBP12.46□□□□□ -0.41
COL21A1-211ENST00000488912 TBCKQ8TEA7 893 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 CLIC6Q96NY7 704 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 TMOD4Q9NZQ9 345 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 ZNF536O15090 1300 aa12.46□□□□□ -0.41
COL21A1-211ENST00000488912 A0A1W2PQ27 194 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 A0A1W2PQ64 194 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 A0A1W2PQD8 194 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 SPDYE5A6NIY4 337 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 MEIS2O14770 477 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 IRF6O14896 467 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 NR1I2O75469 434 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 PPATQ06203 517 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 ZSCAN23Q3MJ62 389 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 SH3D19Q5HYK7 790 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 ERO1BQ86YB8 467 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 FSIP1Q8NA03 581 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 NAP1L5Q96NT1 182 aaPredicted RBP12.45□□□□□ -0.42
COL21A1-211ENST00000488912 GLT8D2Q9H1C3 349 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 FBXO2Q9UK22 296 aaPredicted RBP12.45□□□□□ -0.42
COL21A1-211ENST00000488912 GRIN1Q05586 938 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 PTGDRQ13258 359 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 KRI1Q8N9T8 703 aaKnown RBP12.45□□□□□ -0.42
COL21A1-211ENST00000488912 MRPS27Q92552 414 aaKnown RBP12.45□□□□□ -0.42
COL21A1-211ENST00000488912 WNK4Q96J92 1243 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 SLC38A10Q9HBR0 1119 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 DACT1Q9NYF0 836 aa12.45□□□□□ -0.42
COL21A1-211ENST00000488912 RBBP6Q7Z6E9 1792 aaKnown RBP12.45□□□□□ -0.42
COL21A1-211ENST00000488912 BMP15O95972 392 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 ICAM1P05362 532 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 XRCC6P12956 609 aaKnown RBP eCLIP12.44□□□□□ -0.42
COL21A1-211ENST00000488912 PTPREP23469 700 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 ATP2C1P98194 919 aaPredicted RBP12.44□□□□□ -0.42
COL21A1-211ENST00000488912 TRAF1Q13077 416 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 LETM2Q2VYF4 491 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 LDLRAD1Q5T700 205 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 NEK8Q86SG6 692 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 SYAP1Q96A49 352 aaPredicted RBP12.44□□□□□ -0.42
COL21A1-211ENST00000488912 ATG4CQ96DT6 458 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 AGBL1Q96MI9 1066 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 MORC2Q9Y6X9 1032 aaPredicted RBP12.44□□□□□ -0.42
COL21A1-211ENST00000488912 A0A1B0GVL5 298 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 CUTAO60888 179 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 TREML2Q5T2D2 321 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 CCDC183Q5T5S1 534 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 SHC4Q6S5L8 630 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 CCDC73Q6ZRK6 1079 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 OPTNQ96CV9 577 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 P2RX7Q99572 595 aaKnown RBP12.44□□□□□ -0.42
COL21A1-211ENST00000488912 CCPG1Q9ULG6 757 aa12.44□□□□□ -0.42
COL21A1-211ENST00000488912 SRPRBQ9Y5M8 271 aaKnown RBP12.44□□□□□ -0.42
COL21A1-211ENST00000488912 A0A0G2JLL6 359 aaPredicted RBP12.43□□□□□ -0.42
COL21A1-211ENST00000488912 VWA5AO00534 786 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 CCNT1O60563 726 aaKnown RBP12.43□□□□□ -0.42
COL21A1-211ENST00000488912 HOXA13P31271 388 aaPredicted RBP12.43□□□□□ -0.42
COL21A1-211ENST00000488912 FAM160A1Q05DH4 1040 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 SNW1Q13573 536 aaKnown RBP12.43□□□□□ -0.42
COL21A1-211ENST00000488912 CATSPERGQ6ZRH7 1159 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 PRRT2Q7Z6L0 340 aaPredicted RBP12.43□□□□□ -0.42
COL21A1-211ENST00000488912 CPXCR1Q8N123 301 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 RAVER2Q9HCJ3 691 aaKnown RBP12.43□□□□□ -0.42
COL21A1-211ENST00000488912 TRPM7Q96QT4 1865 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 ABCB11O95342 1321 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 SYCE3A1L190 88 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 EDIL3O43854 480 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 CMA1P23946 247 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 NDUFA8P51970 172 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 RBM10P98175 930 aaKnown RBP12.43□□□□□ -0.42
COL21A1-211ENST00000488912 PPIL2Q13356 520 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 SPECC1Q5M775 1068 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 C4orf32Q8N8J7 132 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 ENGASEQ8NFI3 743 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms