RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 SOWAHBA6NEL2 793 aa22.61■■□□□ 1.21
GGPS1-206ENST00000488594 ACRP10323 421 aa22.61■■□□□ 1.21
GGPS1-206ENST00000488594 BEX3Q00994 111 aa22.61■■□□□ 1.21
GGPS1-206ENST00000488594 FSCN1Q16658 493 aaKnown RBP22.61■■□□□ 1.21
GGPS1-206ENST00000488594 AKNAD1Q5T1N1 836 aa22.61■■□□□ 1.21
GGPS1-206ENST00000488594 HERVK_113Q902F9 699 aa22.61■■□□□ 1.21
GGPS1-206ENST00000488594 TRERF1Q96PN7 1200 aa22.61■■□□□ 1.21
GGPS1-206ENST00000488594 HIPK3Q9H422 1215 aa22.61■■□□□ 1.21
GGPS1-206ENST00000488594 MSRAQ9UJ68 235 aa22.61■■□□□ 1.21
GGPS1-206ENST00000488594 Q9Y3F1 56 aa22.61■■□□□ 1.21
GGPS1-206ENST00000488594 MCCP23508 829 aa22.6■■□□□ 1.21
GGPS1-206ENST00000488594 CYP2C18P33260 490 aa22.6■■□□□ 1.21
GGPS1-206ENST00000488594 PBX2P40425 430 aa22.6■■□□□ 1.21
GGPS1-206ENST00000488594 TTC28Q96AY4 2481 aa22.59■■□□□ 1.21
GGPS1-206ENST00000488594 ASTN1O14525 1302 aa22.59■■□□□ 1.21
GGPS1-206ENST00000488594 GRXCR1A8MXD5 290 aa22.59■■□□□ 1.21
GGPS1-206ENST00000488594 ALAS1P13196 640 aa22.59■■□□□ 1.21
GGPS1-206ENST00000488594 ITGA7Q13683 1181 aa22.59■■□□□ 1.21
GGPS1-206ENST00000488594 IQSEC1Q6DN90 963 aa22.59■■□□□ 1.21
GGPS1-206ENST00000488594 RCSD1Q6JBY9 416 aa22.59■■□□□ 1.21
GGPS1-206ENST00000488594 SEC62Q99442 399 aaKnown RBP22.59■■□□□ 1.21
GGPS1-206ENST00000488594 FSD1Q9BTV5 496 aa22.59■■□□□ 1.21
GGPS1-206ENST00000488594 STX8Q9UNK0 236 aa22.59■■□□□ 1.21
GGPS1-206ENST00000488594 MCM3APO60318 1980 aa22.59■■□□□ 1.21
GGPS1-206ENST00000488594 SPTBN5Q9NRC6 3674 aaKnown RBP22.58■■□□□ 1.21
GGPS1-206ENST00000488594 TSPY2A6NKD2 308 aa22.58■■□□□ 1.21
GGPS1-206ENST00000488594 FGBP02675 491 aa22.58■■□□□ 1.21
GGPS1-206ENST00000488594 SMPD1P17405 629 aa22.58■■□□□ 1.21
GGPS1-206ENST00000488594 ZMYM1Q5SVZ6 1142 aa22.58■■□□□ 1.21
GGPS1-206ENST00000488594 ATXN2LQ8WWM7 1075 aaKnown RBP22.58■■□□□ 1.21
GGPS1-206ENST00000488594 CYP39A1Q9NYL5 469 aa22.58■■□□□ 1.21
GGPS1-206ENST00000488594 DYNC1LI2O43237 492 aaPredicted RBP22.57■■□□□ 1.2
GGPS1-206ENST00000488594 PRDM12Q9H4Q4 367 aa22.57■■□□□ 1.2
GGPS1-206ENST00000488594 PRR12Q9ULL5 1215 aa22.57■■□□□ 1.2
GGPS1-206ENST00000488594 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.57■■□□□ 1.2
GGPS1-206ENST00000488594 KCTD1Q719H9 257 aa22.56■■□□□ 1.2
GGPS1-206ENST00000488594 PI4K2BQ8TCG2 481 aa22.56■■□□□ 1.2
GGPS1-206ENST00000488594 VTA1Q9NP79 307 aa22.56■■□□□ 1.2
GGPS1-206ENST00000488594 TNFRSF10AO00220 468 aa22.55■■□□□ 1.2
GGPS1-206ENST00000488594 TAPT1Q6NXT6 567 aa22.55■■□□□ 1.2
GGPS1-206ENST00000488594 NOC4LQ9BVI4 516 aaKnown RBP22.55■■□□□ 1.2
GGPS1-206ENST00000488594 SLC28A3Q9HAS3 691 aa22.55■■□□□ 1.2
GGPS1-206ENST00000488594 CXXC1Q9P0U4 656 aaPredicted RBP22.55■■□□□ 1.2
GGPS1-206ENST00000488594 CCPG1Q9ULG6 757 aa22.55■■□□□ 1.2
GGPS1-206ENST00000488594 GRIN2DO15399 1336 aa22.55■■□□□ 1.2
GGPS1-206ENST00000488594 ICAM1P05362 532 aa22.54■■□□□ 1.2
GGPS1-206ENST00000488594 MUM1L1Q5H9M0 696 aa22.54■■□□□ 1.2
GGPS1-206ENST00000488594 EEPD1Q7L9B9 569 aa22.54■■□□□ 1.2
GGPS1-206ENST00000488594 FBXO16Q8IX29 292 aaPredicted RBP22.54■■□□□ 1.2
GGPS1-206ENST00000488594 RPUSD2Q8IZ73 545 aaKnown RBP22.54■■□□□ 1.2
GGPS1-206ENST00000488594 MORC4Q8TE76 937 aa22.54■■□□□ 1.2
GGPS1-206ENST00000488594 PDGFCQ9NRA1 345 aa22.54■■□□□ 1.2
GGPS1-206ENST00000488594 IL17RBQ9NRM6 502 aa22.54■■□□□ 1.2
GGPS1-206ENST00000488594 THEGQ9P2T0 379 aa22.54■■□□□ 1.2
GGPS1-206ENST00000488594 LOC102724159A0A0B4J2E5 919 aa22.53■■□□□ 1.2
GGPS1-206ENST00000488594 B4GALT4O60513 344 aa22.53■■□□□ 1.2
GGPS1-206ENST00000488594 PWP2Q15269 919 aaKnown RBP22.53■■□□□ 1.2
GGPS1-206ENST00000488594 NSMFQ6X4W1 530 aa22.53■■□□□ 1.2
GGPS1-206ENST00000488594 OTOP2Q7RTS6 562 aa22.53■■□□□ 1.2
GGPS1-206ENST00000488594 DCAF4Q8WV16 495 aa22.53■■□□□ 1.2
GGPS1-206ENST00000488594 PPM1EQ8WY54 764 aa22.53■■□□□ 1.2
GGPS1-206ENST00000488594 CHMP4CQ96CF2 233 aa22.53■■□□□ 1.2
GGPS1-206ENST00000488594 TRPV6Q9H1D0 765 aa22.53■■□□□ 1.2
GGPS1-206ENST00000488594 ADD3Q9UEY8 706 aaKnown RBP22.53■■□□□ 1.2
GGPS1-206ENST00000488594 UMODL1Q5DID0 1318 aa22.53■■□□□ 1.2
GGPS1-206ENST00000488594 NOVP48745 357 aa22.52■■□□□ 1.2
GGPS1-206ENST00000488594 CCL23P55773 120 aa22.52■■□□□ 1.2
GGPS1-206ENST00000488594 SNAP25P60880 206 aa22.52■■□□□ 1.2
GGPS1-206ENST00000488594 KIAA1211Q6ZU35 1233 aa22.52■■□□□ 1.2
GGPS1-206ENST00000488594 ASB2Q96Q27 587 aa22.52■■□□□ 1.2
GGPS1-206ENST00000488594 ANAPC4Q9UJX5 808 aa22.52■■□□□ 1.2
GGPS1-206ENST00000488594 RANBP6O60518 1105 aaKnown RBP22.51■■□□□ 1.19
GGPS1-206ENST00000488594 NMT2O60551 498 aa22.51■■□□□ 1.19
GGPS1-206ENST00000488594 PFKMP08237 780 aa22.51■■□□□ 1.19
GGPS1-206ENST00000488594 SUPT20HL2P0C7V6 817 aa22.51■■□□□ 1.19
GGPS1-206ENST00000488594 MX1P20591 662 aa22.51■■□□□ 1.19
GGPS1-206ENST00000488594 CTDSPL2Q05D32 466 aa22.51■■□□□ 1.19
GGPS1-206ENST00000488594 ADGRE1Q14246 886 aa22.51■■□□□ 1.19
GGPS1-206ENST00000488594 CCDC96Q2M329 555 aa22.51■■□□□ 1.19
GGPS1-206ENST00000488594 DUSP28Q4G0W2 176 aa22.51■■□□□ 1.19
GGPS1-206ENST00000488594 WNT8AQ9H1J5 351 aa22.51■■□□□ 1.19
GGPS1-206ENST00000488594 ALDH8A1Q9H2A2 487 aaPredicted RBP22.51■■□□□ 1.19
GGPS1-206ENST00000488594 RANBP17Q9H2T7 1088 aaKnown RBP22.51■■□□□ 1.19
GGPS1-206ENST00000488594 NKX2-4Q9H2Z4 354 aa22.51■■□□□ 1.19
GGPS1-206ENST00000488594 SLC4A7Q9Y6M7 1214 aa22.51■■□□□ 1.19
GGPS1-206ENST00000488594 FOXP2O15409 715 aa22.5■■□□□ 1.19
GGPS1-206ENST00000488594 ORC4O43929 436 aa22.5■■□□□ 1.19
GGPS1-206ENST00000488594 IGFBP4P22692 258 aa22.5■■□□□ 1.19
GGPS1-206ENST00000488594 PSMC6P62333 389 aa22.5■■□□□ 1.19
GGPS1-206ENST00000488594 MRPS5P82675 430 aaKnown RBP22.5■■□□□ 1.19
GGPS1-206ENST00000488594 POLR3EQ9NVU0 708 aa22.5■■□□□ 1.19
GGPS1-206ENST00000488594 PNMA2Q9UL42 364 aa22.5■■□□□ 1.19
GGPS1-206ENST00000488594 YBX2Q9Y2T7 364 aaKnown RBP22.5■■□□□ 1.19
GGPS1-206ENST00000488594 DDX49Q9Y6V7 483 aaKnown RBP22.5■■□□□ 1.19
GGPS1-206ENST00000488594 LRRC37A2A6NM11 1700 aa22.5■■□□□ 1.19
GGPS1-206ENST00000488594 PTGS1P23219 599 aa22.5■■□□□ 1.19
GGPS1-206ENST00000488594 BTNL9Q6UXG8 535 aa22.5■■□□□ 1.19
GGPS1-206ENST00000488594 OTUD7AQ8TE49 926 aaPredicted RBP22.5■■□□□ 1.19
GGPS1-206ENST00000488594 MTMR7Q9Y216 660 aa22.5■■□□□ 1.19
GGPS1-206ENST00000488594 PCDHA11Q9Y5I1 949 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms