RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 RHOXF2Q9BQY4 288 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 CENPOQ9BU64 300 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 SCAND2PQ9GZW5 306 aaPredicted RBP7.02□□□□□ -1.29
SIK3-212ENST00000488337 SH2B1Q9NRF2 756 aaPredicted RBP7.02□□□□□ -1.29
SIK3-212ENST00000488337 IFNKQ9P0W0 207 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 SWAP70Q9UH65 585 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 PPME1Q9Y570 386 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 TMEM110-MUSTN1A8MSY1 372 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 USO1O60763 962 aaKnown RBP7.02□□□□□ -1.29
SIK3-212ENST00000488337 SPATA31D3P0C874 917 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 MXRA7P84157 204 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 SPATA31D4Q6ZUB0 917 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 NANOGNBQ7Z5D8 188 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 ZNF554Q86TJ5 538 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 DDX54Q8TDD1 881 aaKnown RBP7.02□□□□□ -1.29
SIK3-212ENST00000488337 ARL8AQ96BM9 186 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 TFIP11Q9UBB9 837 aaKnown RBP7.02□□□□□ -1.29
SIK3-212ENST00000488337 PRC1O43663 620 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 GNA14O95837 355 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 TGFB3P10600 412 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 TOP1P11387 765 aaKnown RBP7.02□□□□□ -1.29
SIK3-212ENST00000488337 RXRBP28702 533 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 MLH1P40692 756 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 SEPT14Q6ZU15 432 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 CCDC121Q6ZUS5 278 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 AOPEPQ8N6M6 819 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 ZNF653Q96CK0 615 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 SH3GL1Q99961 368 aa7.02□□□□□ -1.29
SIK3-212ENST00000488337 C9orf78Q9NZ63 289 aaPredicted RBP7.02□□□□□ -1.29
SIK3-212ENST00000488337 A0A0J9YVX5 310 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 TTI1O43156 1089 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 LARGE1O95461 756 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 PAEPP09466 180 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 TRIM21P19474 475 aaKnown RBP7.01□□□□□ -1.29
SIK3-212ENST00000488337 ENDOUP21128 410 aaKnown RBP7.01□□□□□ -1.29
SIK3-212ENST00000488337 PSMA5P28066 241 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 CDK17Q00537 523 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 MAP3K12Q12852 859 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 RNF187Q5TA31 235 aaPredicted RBP7.01□□□□□ -1.29
SIK3-212ENST00000488337 C14orf80Q86SX3 495 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 MLKLQ8NB16 471 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 TIPINQ9BVW5 301 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 FAM192AQ9GZU8 254 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 STAP2Q9UGK3 403 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 IFT172Q9UG01 1749 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 H3BQV1 296 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 TBC1D12O60347 775 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 TRIM37O94972 964 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 CPA1P15085 419 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 ATP6V1C1P21283 382 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 CSE1LP55060 971 aaKnown RBP7.01□□□□□ -1.29
SIK3-212ENST00000488337 PPIDQ08752 370 aaKnown RBP7.01□□□□□ -1.29
SIK3-212ENST00000488337 MTHFSDQ2M296 383 aaKnown RBP7.01□□□□□ -1.29
SIK3-212ENST00000488337 IFFO2Q5TF58 517 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 MYO1HQ8N1T3 1032 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 WHAMMQ8TF30 809 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 RUBCNQ92622 972 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 HNRNPABQ99729 332 aaKnown RBP7.01□□□□□ -1.29
SIK3-212ENST00000488337 BHMT2Q9H2M3 363 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 ZSWIM4Q9H7M6 989 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 INTS13Q9NVM9 706 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 FBXO9Q9UK97 447 aaPredicted RBP7.01□□□□□ -1.29
SIK3-212ENST00000488337 SNX14Q9Y5W7 946 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 RAD21O60216 631 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 DTNBO60941 627 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 TACC1O75410 805 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 WFS1O76024 890 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 CLTAP09496 248 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 ITGA7Q13683 1181 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 PPP4R3AQ6IN85 833 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 CD302Q8IX05 232 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 SYT2Q8N9I0 419 aaPredicted RBP7.01□□□□□ -1.29
SIK3-212ENST00000488337 TC2NQ8N9U0 490 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 CCDC12Q8WUD4 166 aaPredicted RBP7.01□□□□□ -1.29
SIK3-212ENST00000488337 NEK1Q96PY6 1258 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 NACAP1Q9BZK3 213 aa7.01□□□□□ -1.29
SIK3-212ENST00000488337 R3HDM2Q9Y2K5 976 aaKnown RBP7.01□□□□□ -1.29
SIK3-212ENST00000488337 CFAP73A6NFT4 308 aa7□□□□□ -1.29
SIK3-212ENST00000488337 TBKBP1A7MCY6 615 aa7□□□□□ -1.29
SIK3-212ENST00000488337 ACTN4O43707 911 aaKnown RBP7□□□□□ -1.29
SIK3-212ENST00000488337 MTRF1O75570 445 aaKnown RBP7□□□□□ -1.29
SIK3-212ENST00000488337 FLOT1O75955 427 aa7□□□□□ -1.29
SIK3-212ENST00000488337 ADAMTS2O95450 1211 aa7□□□□□ -1.29
SIK3-212ENST00000488337 GSTA2P09210 222 aa7□□□□□ -1.29
SIK3-212ENST00000488337 FECHP22830 423 aa7□□□□□ -1.29
SIK3-212ENST00000488337 MDH1P40925 334 aaKnown RBP7□□□□□ -1.29
SIK3-212ENST00000488337 MCCD1P59942 119 aaPredicted RBP7□□□□□ -1.29
SIK3-212ENST00000488337 ARPC4P59998 168 aa7□□□□□ -1.29
SIK3-212ENST00000488337 LMNB2Q03252 620 aa7□□□□□ -1.29
SIK3-212ENST00000488337 QPCTQ16769 361 aa7□□□□□ -1.29
SIK3-212ENST00000488337 CCDC73Q6ZRK6 1079 aa7□□□□□ -1.29
SIK3-212ENST00000488337 ESX1Q8N693 406 aa7□□□□□ -1.29
SIK3-212ENST00000488337 STKLD1Q8NE28 680 aa7□□□□□ -1.29
SIK3-212ENST00000488337 ABHD8Q96I13 439 aa7□□□□□ -1.29
SIK3-212ENST00000488337 SPATA32Q96LK8 384 aa7□□□□□ -1.29
SIK3-212ENST00000488337 SLC39A3Q9BRY0 314 aa7□□□□□ -1.29
SIK3-212ENST00000488337 FAM167BQ9BTA0 163 aa7□□□□□ -1.29
SIK3-212ENST00000488337 MROH1Q8NDA8 1641 aa7□□□□□ -1.29
SIK3-212ENST00000488337 TSPOAP1O95153 1857 aa7□□□□□ -1.29
SIK3-212ENST00000488337 MROH2AA6NES4 1674 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms