RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 FAM205AQ6ZU69 1335 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 SPDYE3A6NKU9 549 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 USP27XA6NNY8 438 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 USP17L5A8MUK1 530 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 TMEM232C9JQI7 657 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 KRT86O43790 486 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 MFAP3LO75121 409 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 APBA3O96018 575 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 IDEP14735 1019 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 TM4SF1P30408 202 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 HOXA10P31260 410 aaPredicted RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 TECP42680 631 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 SLC1A4P43007 532 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 EIF6P56537 245 aaKnown RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 GRIN1Q05586 938 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 FMR1Q06787 632 aaKnown RBP eCLIP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 NR1I3Q14994 352 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 GRIPAP1Q4V328 841 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 HHIPL2Q6UWX4 724 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 STXBP4Q6ZWJ1 553 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 ZNF771Q7L3S4 317 aaPredicted RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CACNA2D4Q7Z3S7 1137 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 KRT222Q8N1A0 295 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 LRRC47Q8N1G4 583 aaKnown RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 RETREG2Q8NC44 543 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 TBCKQ8TEA7 893 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 SNX29Q8TEQ0 813 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 DPF2Q92785 391 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CNKSR1Q969H4 720 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CEP95Q96GE4 821 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 FAM163AQ96GL9 167 aaPredicted RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 ALS2CR12Q96Q35 445 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 ZMYND12Q9H0C1 365 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 RIC8AQ9NPQ8 531 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 MYO1AQ9UBC5 1043 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 DDX25Q9UHL0 483 aaKnown RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 KAT6BQ8WYB5 2073 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 THSD7AQ9UPZ6 1657 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 GAKO14976 1311 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 EFCAB8A8MWE9 144 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 PPP1R12BO60237 982 aaPredicted RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 GNA14O95837 355 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 TUBBP07437 444 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 PLCG1P19174 1290 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CBX1P83916 185 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 SF3B2Q13435 895 aaKnown RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 KRT31Q15323 416 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 DOK7Q18PE1 504 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CRY2Q49AN0 593 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CERKLQ49MI3 558 aaPredicted RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 ZNF569Q5MCW4 686 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CC2D2BQ6DHV5 1058 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 PDXDC2PQ6P474 469 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 USP17L2Q6R6M4 530 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 PODNQ7Z5L7 613 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 SH3RF1Q7Z6J0 888 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 TXNRD3Q86VQ6 643 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 SMAP1Q8IYB5 467 aaPredicted RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 SLC44A5Q8NCS7 719 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 LARP4BQ92615 738 aaKnown RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 TNFRSF25Q93038 417 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 P2RX5Q93086 422 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CCDC43Q96MW1 224 aaKnown RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 NAPGQ99747 312 aaPredicted RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 ZHX3Q9H4I2 956 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 PSTPIP2Q9H939 334 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 KANSL2Q9H9L4 492 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 GOPCQ9HD26 462 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 LZTFL1Q9NQ48 299 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 IL17RBQ9NRM6 502 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 STK32BQ9NY57 414 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CTAGE15A4D2H0 777 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 PPP1R3GB7ZBB8 358 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 POLRMTO00411 1230 aaKnown RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 TBCAO75347 108 aaKnown RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 FOSP01100 380 aaPredicted RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CTAGE8P0CG41 777 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CCNE1P24864 410 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CASP14P31944 242 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CRKP46108 304 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 SCNN1DP51172 638 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 NAP1L1P55209 391 aaKnown RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 ELF2Q15723 593 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 TXNRD1Q16881 649 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 MAP9Q49MG5 647 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 E4F1Q66K89 784 aaPredicted RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CTAGE6Q86UF2 777 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 CTAGE4Q8IX94 777 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 SMYD4Q8IYR2 804 aaPredicted RBP2.96□□□□□ -1.94
C9orf72-205ENST00000488117 NEK11Q8NG66 645 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 ANKRD7Q92527 254 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 C7orf25Q9BPX7 421 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 UBA5Q9GZZ9 404 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 TMX1Q9H3N1 280 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 MTMR4Q9NYA4 1195 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 TCHHQ07283 1943 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 MYH13Q9UKX3 1938 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 NAV1Q8NEY1 1877 aa2.96□□□□□ -1.94
C9orf72-205ENST00000488117 PVALEFA0A1B0GWK0 134 aa2.95□□□□□ -1.94
C9orf72-205ENST00000488117 ZBTB5O15062 677 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms